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The map label for this gene is ybfB [H]

Identifier: 182678219

GI number: 182678219

Start: 1435733

End: 1437034

Strand: Direct

Name: ybfB [H]

Synonym: Bind_1234

Alternate gene names: 182678219

Gene position: 1435733-1437034 (Clockwise)

Preceding gene: 182678213

Following gene: 182678220

Centisome position: 34.43

GC content: 58.29

Gene sequence:

>1302_bases
ATGCCCAATAAATCAATCCATTATGCTTGGATCGTCGCGGCCGTCACCTTTCTGGTTCTGTTGATCGGCGCCGGCATACG
CGCCACTCCCGGCGTTTTGATCTTGCCGTTGCAACAGGAATTCGGCTGGTCGAATGCGCAGATCAGCGGCGCGATCGCGA
TCAATATTCTGCTCTATGGTCTTGTTGGACCTTTCGCCGTTGCTTTGATGGAGCGTTTTGGCCTGCGCGCGACTGTTTGC
GCGGCTCTTGGCCTCCTGAGTGTGGGCGTCGGATTGACAATCTTCATGACGGCGCCCTGGCAATTGACTTTGCTTTGGGG
GCTCGTTGTCGGGCTGGGGTCCGGCATGGTCGCCATGGTTCTCGGCGCGACGGTCGCGGAGCGCTGGTTTGTCCAGAGAC
GCGGTTTGATCCTCGGCCTTTTGACGGCGAGCAGCGCCACGGGTCAGCTTGTGTTTCTTCCTCTCCTGGCTCAACTGGTG
GCGTGGCAGGGCTGGCGCGCCGTTTCCTTGACGGTCGCGCTTCTGGCGCTCCTCTTGGTTCCGCTCGTGGCTTTGTTGTT
GCGGGACAGGCCCGTGGATCTCGGCCTGCCGCCTTATGGGGGTGACGCGCTTGTTCCAGCCGTCAATAAACATCGCAATC
CTGTGGCGCGAGCCTTGCGCGCCTTGGGGACTGGTTTTTTGAGCCGTGACTTCTGGTTGCTTGGCGGCAGTTTCTTCATC
TGTGGCGCTTCCACCAATGGTTTGATTGGTACGCACTTGATAACCGCCTGCGGCGATTACAATATTCCGGAAGTGCGGGC
GGCTGGGCTTTTGGCGATGATGGGTGTGTTCGATTTTTTCGGCACGACGGGCTCGGGCTGGCTGACCGACCGTTTCGACA
GCCGGCTTCTGCTTTTCTGGTATTATGCCTTGCGTGGTCTGTCGCTTCTCTATCTTCCCTTTGCCTTCGACGGCAGTTTT
TATGGTTTGTCGATTTTCGCGGTCTTTTATGGTCTCGACTGGATTGCGACTGTGCCGCCGACCATTCGTCTCGCCGAACA
GTCCTTCGGTCGTGAAAATGCGGCTGTGATGTTTGGTTGGATTGCCGCTCTGCATCAGGTCGGCGGTGCCTTTGCCGCTT
GGGTTGCCGGCACATTACGCACACAAACCGGCAGCTATTTCAGTGCTTTTCTCTCCGCTGGCCTGATGTGTTTTCTGGCT
GCGATCCTGGTCGCCTTCATCGGGTCGGGGCGTGCTTTGCCCGATGCGAAGCGTTCTCGGCGTCTGATGCCGGAGACAGG
GAGCCTGGCTGAAAATGGCTGA

Upstream 100 bases:

>100_bases
AGTCCTCTTGACTATGGGCAATTACCCATATTTGATGCTCGCCATTCCGTGTCTGGTCATCCGCTGCGGTGGAGTCCCTT
ACGATTGAACTGGCAAGCCC

Downstream 100 bases:

>100_bases
TGAACCCCAAATCTGCAGTTGTGCGGCTTTGCGTCAGGCGACGCGGCATGTCTCGCGTCTGTATGATGAAGCGCTTGCAC
CGCTCGGTCTGAGCCTTAAT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MPNKSIHYAWIVAAVTFLVLLIGAGIRATPGVLILPLQQEFGWSNAQISGAIAINILLYGLVGPFAVALMERFGLRATVC
AALGLLSVGVGLTIFMTAPWQLTLLWGLVVGLGSGMVAMVLGATVAERWFVQRRGLILGLLTASSATGQLVFLPLLAQLV
AWQGWRAVSLTVALLALLLVPLVALLLRDRPVDLGLPPYGGDALVPAVNKHRNPVARALRALGTGFLSRDFWLLGGSFFI
CGASTNGLIGTHLITACGDYNIPEVRAAGLLAMMGVFDFFGTTGSGWLTDRFDSRLLLFWYYALRGLSLLYLPFAFDGSF
YGLSIFAVFYGLDWIATVPPTIRLAEQSFGRENAAVMFGWIAALHQVGGAFAAWVAGTLRTQTGSYFSAFLSAGLMCFLA
AILVAFIGSGRALPDAKRSRRLMPETGSLAENG

Sequences:

>Translated_433_residues
MPNKSIHYAWIVAAVTFLVLLIGAGIRATPGVLILPLQQEFGWSNAQISGAIAINILLYGLVGPFAVALMERFGLRATVC
AALGLLSVGVGLTIFMTAPWQLTLLWGLVVGLGSGMVAMVLGATVAERWFVQRRGLILGLLTASSATGQLVFLPLLAQLV
AWQGWRAVSLTVALLALLLVPLVALLLRDRPVDLGLPPYGGDALVPAVNKHRNPVARALRALGTGFLSRDFWLLGGSFFI
CGASTNGLIGTHLITACGDYNIPEVRAAGLLAMMGVFDFFGTTGSGWLTDRFDSRLLLFWYYALRGLSLLYLPFAFDGSF
YGLSIFAVFYGLDWIATVPPTIRLAEQSFGRENAAVMFGWIAALHQVGGAFAAWVAGTLRTQTGSYFSAFLSAGLMCFLA
AILVAFIGSGRALPDAKRSRRLMPETGSLAENG
>Mature_432_residues
PNKSIHYAWIVAAVTFLVLLIGAGIRATPGVLILPLQQEFGWSNAQISGAIAINILLYGLVGPFAVALMERFGLRATVCA
ALGLLSVGVGLTIFMTAPWQLTLLWGLVVGLGSGMVAMVLGATVAERWFVQRRGLILGLLTASSATGQLVFLPLLAQLVA
WQGWRAVSLTVALLALLLVPLVALLLRDRPVDLGLPPYGGDALVPAVNKHRNPVARALRALGTGFLSRDFWLLGGSFFIC
GASTNGLIGTHLITACGDYNIPEVRAAGLLAMMGVFDFFGTTGSGWLTDRFDSRLLLFWYYALRGLSLLYLPFAFDGSFY
GLSIFAVFYGLDWIATVPPTIRLAEQSFGRENAAVMFGWIAALHQVGGAFAAWVAGTLRTQTGSYFSAFLSAGLMCFLAA
ILVAFIGSGRALPDAKRSRRLMPETGSLAENG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Homo sapiens, GI292781289, Length=450, Percent_Identity=26, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI40789261, Length=450, Percent_Identity=26, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI42475555, Length=393, Percent_Identity=27.9898218829517, Blast_Score=74, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17550316, Length=164, Percent_Identity=31.7073170731707, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17557434, Length=212, Percent_Identity=28.3018867924528, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI32567122, Length=212, Percent_Identity=28.3018867924528, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI19922230, Length=214, Percent_Identity=29.9065420560748, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24653578, Length=214, Percent_Identity=29.9065420560748, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24653581, Length=214, Percent_Identity=29.9065420560748, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46208; Mature: 46077

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNKSIHYAWIVAAVTFLVLLIGAGIRATPGVLILPLQQEFGWSNAQISGAIAINILLYG
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHCCCCCCEECHHHHHHHHHHH
LVGPFAVALMERFGLRATVCAALGLLSVGVGLTIFMTAPWQLTLLWGLVVGLGSGMVAMV
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHH
LGATVAERWFVQRRGLILGLLTASSATGQLVFLPLLAQLVAWQGWRAVSLTVALLALLLV
HHHHHHHHHHHHHCCCEEEEEECCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
PLVALLLRDRPVDLGLPPYGGDALVPAVNKHRNPVARALRALGTGFLSRDFWLLGGSFFI
HHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCCCEEECCCEEE
CGASTNGLIGTHLITACGDYNIPEVRAAGLLAMMGVFDFFGTTGSGWLTDRFDSRLLLFW
EECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHH
YYALRGLSLLYLPFAFDGSFYGLSIFAVFYGLDWIATVPPTIRLAEQSFGRENAAVMFGW
HHHHHCCEEEEEEEEECCCHHHHHHHHHHHCCHHHHCCCCHHHHHHHHCCCCCHHHHHHH
IAALHQVGGAFAAWVAGTLRTQTGSYFSAFLSAGLMCFLAAILVAFIGSGRALPDAKRSR
HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCC
RLMPETGSLAENG
CCCCCCCCCCCCC
>Mature Secondary Structure 
PNKSIHYAWIVAAVTFLVLLIGAGIRATPGVLILPLQQEFGWSNAQISGAIAINILLYG
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHCCCCCCEECHHHHHHHHHHH
LVGPFAVALMERFGLRATVCAALGLLSVGVGLTIFMTAPWQLTLLWGLVVGLGSGMVAMV
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHH
LGATVAERWFVQRRGLILGLLTASSATGQLVFLPLLAQLVAWQGWRAVSLTVALLALLLV
HHHHHHHHHHHHHCCCEEEEEECCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
PLVALLLRDRPVDLGLPPYGGDALVPAVNKHRNPVARALRALGTGFLSRDFWLLGGSFFI
HHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCCCEEECCCEEE
CGASTNGLIGTHLITACGDYNIPEVRAAGLLAMMGVFDFFGTTGSGWLTDRFDSRLLLFW
EECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHH
YYALRGLSLLYLPFAFDGSFYGLSIFAVFYGLDWIATVPPTIRLAEQSFGRENAAVMFGW
HHHHHCCEEEEEEEEECCCHHHHHHHHHHHCCHHHHCCCCHHHHHHHHCCCCCHHHHHHH
IAALHQVGGAFAAWVAGTLRTQTGSYFSAFLSAGLMCFLAAILVAFIGSGRALPDAKRSR
HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCC
RLMPETGSLAENG
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]