| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
Click here to switch to the map view.
The map label for this gene is marR [C]
Identifier: 182678220
GI number: 182678220
Start: 1437027
End: 1437461
Strand: Direct
Name: marR [C]
Synonym: Bind_1235
Alternate gene names: 182678220
Gene position: 1437027-1437461 (Clockwise)
Preceding gene: 182678219
Following gene: 182678224
Centisome position: 34.46
GC content: 56.32
Gene sequence:
>435_bases ATGGCTGATGAACCCCAAATCTGCAGTTGTGCGGCTTTGCGTCAGGCGACGCGGCATGTCTCGCGTCTGTATGATGAAGC GCTTGCACCGCTCGGTCTGAGCCTTAATCAATATTCGATCCTTGCCAAGCTCTCGCGTTTCGGCCCGCATACGGTCCAGG CCTTGGCCGATCGGCTGGTCATGGACCGTTCGACACTGGGTCATTTGCTGCGCCCGTTGGAACGGGCCGGCTGGATCAAA ATCGGCGTTTCCCCATCCGATAAACGTCAGCGTGTCATCAGCTTAACACCATCCGGTTCGCAGTTGATGCAAGAGGCTCA ACCTCTATGGGCGCGAGCGGAGCAACGTTTCCAGAGCCTGTTCGGAGAGGACAATGTGCGGATGTTACAGACCGTCATGA AACAGGTGATAGAGATGGATCTTACCCGGGCATGA
Upstream 100 bases:
>100_bases CTGGCTGCGATCCTGGTCGCCTTCATCGGGTCGGGGCGTGCTTTGCCCGATGCGAAGCGTTCTCGGCGTCTGATGCCGGA GACAGGGAGCCTGGCTGAAA
Downstream 100 bases:
>100_bases GTGTTTACTGCAAGCTGATCGTATGACCTTCGGCGCGGCTGAGAAGCTCTTCCAGAGCTTCGGCAGGGACGACCACCATG CGCTGGCCGCGCATTTTGAC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Regulatory Protein MarR; Transcription Regulator Protein; MarR Family Regulatory Protein; Organic Hydroperoxide Resistance Transcriptional Regulator; MarR-Family Transcriptional Regulator; Regulatory Protein Marr Family; Regulatory Protein; Transcription Regulator Protein MarR Family; Transcriptional Regulator Protein MarR Family; Transcriptional Regulator Protein; MarR Family Regulatory Helix-Turn-Helix Protein; Transcriptional Regulator Marr Family
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MADEPQICSCAALRQATRHVSRLYDEALAPLGLSLNQYSILAKLSRFGPHTVQALADRLVMDRSTLGHLLRPLERAGWIK IGVSPSDKRQRVISLTPSGSQLMQEAQPLWARAEQRFQSLFGEDNVRMLQTVMKQVIEMDLTRA
Sequences:
>Translated_144_residues MADEPQICSCAALRQATRHVSRLYDEALAPLGLSLNQYSILAKLSRFGPHTVQALADRLVMDRSTLGHLLRPLERAGWIK IGVSPSDKRQRVISLTPSGSQLMQEAQPLWARAEQRFQSLFGEDNVRMLQTVMKQVIEMDLTRA >Mature_143_residues ADEPQICSCAALRQATRHVSRLYDEALAPLGLSLNQYSILAKLSRFGPHTVQALADRLVMDRSTLGHLLRPLERAGWIKI GVSPSDKRQRVISLTPSGSQLMQEAQPLWARAEQRFQSLFGEDNVRMLQTVMKQVIEMDLTRA
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16199; Mature: 16068
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADEPQICSCAALRQATRHVSRLYDEALAPLGLSLNQYSILAKLSRFGPHTVQALADRLV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH MDRSTLGHLLRPLERAGWIKIGVSPSDKRQRVISLTPSGSQLMQEAQPLWARAEQRFQSL HHHHHHHHHHHHHHHCCEEEECCCCCHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH FGEDNVRMLQTVMKQVIEMDLTRA HCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ADEPQICSCAALRQATRHVSRLYDEALAPLGLSLNQYSILAKLSRFGPHTVQALADRLV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH MDRSTLGHLLRPLERAGWIKIGVSPSDKRQRVISLTPSGSQLMQEAQPLWARAEQRFQSL HHHHHHHHHHHHHHHCCEEEECCCCCHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH FGEDNVRMLQTVMKQVIEMDLTRA HCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA