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The map label for this gene is ompA [C]

Identifier: 182678181

GI number: 182678181

Start: 1389991

End: 1391370

Strand: Direct

Name: ompA [C]

Synonym: Bind_1196

Alternate gene names: 182678181

Gene position: 1389991-1391370 (Clockwise)

Preceding gene: 182678179

Following gene: 182678182

Centisome position: 33.33

GC content: 57.17

Gene sequence:

>1380_bases
ATGAGTCAACCTGAAAAATGGTGGTGGGGCCTCCTACCGCTTGTCCTCCTCTGGATTCTCGTCAATCTGTTCATGGACGG
AACTGTCGAATCCGATCTTGCCACGCGTTCCAAAGCGGCCCTTGGCACTTTTGTGCAAAACCCCGCTGTTTCCGTGTCCG
GCCGTGATGCCACACTAGCAGGCTCGGTTTTCTCGCCCGCGGATGCGCAAACCGCTGTTGATCATGTTGGTGGGACCTGG
GGCGTAAGACGCGTCATCTCCGAACTTGCGGCGTCTCCGGTCGTAAAACCTTATGACTGGCATATCTCACAAGATGGCAA
AAGAGTTACGCTTTCAGGCCATGTGCCTGACACGACCGTCCAGATGAATCTTCTGGCGGCGGTCAGGGCAGCCTTTCCGC
AAAGCCAGATCAACGACCAAACGATCTATGCGGCCGGTGCGCCGGAGGGGTTTGAGAAGGGCGCTCTTTTCGTCATCAGC
CAGCTCGCCCCGCTTGCGGGCGGCAATGCCTCGCTCACCGATAGTGGTTTCTCTATCGCTGGCAAGGCACCGACCGATGC
CGTCTATGACGCGGCTCTCAAGGCCATTCACGCGCCTCCCAAAGGCTTGACGCTCGTCAAGGCGGATATTGTCGCGCCGC
TGCAATATACATTCAGTGCCACGCGGCTCGACGGAAAGCTGACATTGACCGGAGACGTCCCCAGCGAGGATGTGCACAAA
CAGATCCTGGCGGAAGCAAAACGGTTGTTCTTCAATGAGGAGATCGTCGACCGGCTCACCGTGCTCGGCAATGCACCACA
GAATTTCGGCAGCGTGATCCTCGCGGGTATCAATGCGCTTTCGCGTCTCGCTGACGGCGTATTTACCGTTACCAACACGG
ATGTGAAATTGTCGGGCGGGGCGCTCTATGAACGCGCGGTCGCGGCCATCCGCACGAATTTGGCGGATCAATTGCCGGCA
GGCTATCAGACGGATACATCGGCCATTACCGTGCATCCCGAGGATAAAGCCGTCGATTCCAAATCCTGTCAGGCCGAGCT
CGATGGTTTGCTGGGCAAGGCGACGATCCTTTTCGAAACCAATGGGGCGACGATCTCCAAAAGCTCTGAAGGTCTCCTCG
ACAGGATCGTCACGACGATTGGACACTGCCCCGAGGCAACGATTGAAATTTCTGGGCATACAGATTCAACCGGTAACGAG
CCCTTCAATCTCGCTCTTTCGGAACGTCGCGCCAAGGCCGTTTTCGACTATCTCGTTGCCGCTGGCATACCGGCCGACAA
GCTCTCCGCGACTGGCTATGGTTCCAGCCGTCCCGTGGCTTCCAATGATACGGAGGAGGGCAGAGCAAAGAACCGCCGTA
TCGAGTTCACCGTGAAATAA

Upstream 100 bases:

>100_bases
TTTACCGATTGTGTGTAGACATTTCATCCTTTGACTGTTTGCTCGAACGCAAACTCTTCGCTGGTTCGTGATGCAGTCAT
TTTCGGGAGAAAAGCGCGCC

Downstream 100 bases:

>100_bases
GGAGCGCGATCATGACCTATTTGCTTGCGACTTATTGGTTGCCGCTTCTGCTTGCCTTGGCTCTCGGCGCGGCTATCGGA
TTTTATACATTTGCACGGGT

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MSQPEKWWWGLLPLVLLWILVNLFMDGTVESDLATRSKAALGTFVQNPAVSVSGRDATLAGSVFSPADAQTAVDHVGGTW
GVRRVISELAASPVVKPYDWHISQDGKRVTLSGHVPDTTVQMNLLAAVRAAFPQSQINDQTIYAAGAPEGFEKGALFVIS
QLAPLAGGNASLTDSGFSIAGKAPTDAVYDAALKAIHAPPKGLTLVKADIVAPLQYTFSATRLDGKLTLTGDVPSEDVHK
QILAEAKRLFFNEEIVDRLTVLGNAPQNFGSVILAGINALSRLADGVFTVTNTDVKLSGGALYERAVAAIRTNLADQLPA
GYQTDTSAITVHPEDKAVDSKSCQAELDGLLGKATILFETNGATISKSSEGLLDRIVTTIGHCPEATIEISGHTDSTGNE
PFNLALSERRAKAVFDYLVAAGIPADKLSATGYGSSRPVASNDTEEGRAKNRRIEFTVK

Sequences:

>Translated_459_residues
MSQPEKWWWGLLPLVLLWILVNLFMDGTVESDLATRSKAALGTFVQNPAVSVSGRDATLAGSVFSPADAQTAVDHVGGTW
GVRRVISELAASPVVKPYDWHISQDGKRVTLSGHVPDTTVQMNLLAAVRAAFPQSQINDQTIYAAGAPEGFEKGALFVIS
QLAPLAGGNASLTDSGFSIAGKAPTDAVYDAALKAIHAPPKGLTLVKADIVAPLQYTFSATRLDGKLTLTGDVPSEDVHK
QILAEAKRLFFNEEIVDRLTVLGNAPQNFGSVILAGINALSRLADGVFTVTNTDVKLSGGALYERAVAAIRTNLADQLPA
GYQTDTSAITVHPEDKAVDSKSCQAELDGLLGKATILFETNGATISKSSEGLLDRIVTTIGHCPEATIEISGHTDSTGNE
PFNLALSERRAKAVFDYLVAAGIPADKLSATGYGSSRPVASNDTEEGRAKNRRIEFTVK
>Mature_458_residues
SQPEKWWWGLLPLVLLWILVNLFMDGTVESDLATRSKAALGTFVQNPAVSVSGRDATLAGSVFSPADAQTAVDHVGGTWG
VRRVISELAASPVVKPYDWHISQDGKRVTLSGHVPDTTVQMNLLAAVRAAFPQSQINDQTIYAAGAPEGFEKGALFVISQ
LAPLAGGNASLTDSGFSIAGKAPTDAVYDAALKAIHAPPKGLTLVKADIVAPLQYTFSATRLDGKLTLTGDVPSEDVHKQ
ILAEAKRLFFNEEIVDRLTVLGNAPQNFGSVILAGINALSRLADGVFTVTNTDVKLSGGALYERAVAAIRTNLADQLPAG
YQTDTSAITVHPEDKAVDSKSCQAELDGLLGKATILFETNGATISKSSEGLLDRIVTTIGHCPEATIEISGHTDSTGNEP
FNLALSERRAKAVFDYLVAAGIPADKLSATGYGSSRPVASNDTEEGRAKNRRIEFTVK

Specific function: Required For The Action Of Colicins K And L And For The Stabilization Of Mating Aggregates In Conjugation. Serves As A Receptor For A Number Of T-Even Like Phages. Also Acts As A Porin With Low Permeability That Allows Slow Penetration Of Small Solutes.

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=118, Percent_Identity=36.4406779661017, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI48994946, Length=103, Percent_Identity=33.9805825242718, Blast_Score=79, Evalue=9e-16,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR007055 [H]

Pfam domain/function: PF04972 BON; PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 48523; Mature: 48392

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPEKWWWGLLPLVLLWILVNLFMDGTVESDLATRSKAALGTFVQNPAVSVSGRDATLA
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCEEE
GSVFSPADAQTAVDHVGGTWGVRRVISELAASPVVKPYDWHISQDGKRVTLSGHVPDTTV
CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEECCCCCCHH
QMNLLAAVRAAFPQSQINDQTIYAAGAPEGFEKGALFVISQLAPLAGGNASLTDSGFSIA
HHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEC
GKAPTDAVYDAALKAIHAPPKGLTLVKADIVAPLQYTFSATRLDGKLTLTGDVPSEDVHK
CCCCCHHHHHHHHHHHCCCCCCCEEEEHHHHCCHHHEEEEEEECCEEEEECCCCCHHHHH
QILAEAKRLFFNEEIVDRLTVLGNAPQNFGSVILAGINALSRLADGVFTVTNTDVKLSGG
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCEEECCC
ALYERAVAAIRTNLADQLPAGYQTDTSAITVHPEDKAVDSKSCQAELDGLLGKATILFET
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEC
NGATISKSSEGLLDRIVTTIGHCPEATIEISGHTDSTGNEPFNLALSERRAKAVFDYLVA
CCCEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHH
AGIPADKLSATGYGSSRPVASNDTEEGRAKNRRIEFTVK
CCCCHHHCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEEC
>Mature Secondary Structure 
SQPEKWWWGLLPLVLLWILVNLFMDGTVESDLATRSKAALGTFVQNPAVSVSGRDATLA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCEEE
GSVFSPADAQTAVDHVGGTWGVRRVISELAASPVVKPYDWHISQDGKRVTLSGHVPDTTV
CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEECCCCCCHH
QMNLLAAVRAAFPQSQINDQTIYAAGAPEGFEKGALFVISQLAPLAGGNASLTDSGFSIA
HHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEC
GKAPTDAVYDAALKAIHAPPKGLTLVKADIVAPLQYTFSATRLDGKLTLTGDVPSEDVHK
CCCCCHHHHHHHHHHHCCCCCCCEEEEHHHHCCHHHEEEEEEECCEEEEECCCCCHHHHH
QILAEAKRLFFNEEIVDRLTVLGNAPQNFGSVILAGINALSRLADGVFTVTNTDVKLSGG
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCEEECCC
ALYERAVAAIRTNLADQLPAGYQTDTSAITVHPEDKAVDSKSCQAELDGLLGKATILFET
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEC
NGATISKSSEGLLDRIVTTIGHCPEATIEISGHTDSTGNEPFNLALSERRAKAVFDYLVA
CCCEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHH
AGIPADKLSATGYGSSRPVASNDTEEGRAKNRRIEFTVK
CCCCHHHCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]