| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182678182
Identifier: 182678182
GI number: 182678182
Start: 1391382
End: 1392011
Strand: Direct
Name: 182678182
Synonym: Bind_1197
Alternate gene names: NA
Gene position: 1391382-1392011 (Clockwise)
Preceding gene: 182678181
Following gene: 182678184
Centisome position: 33.37
GC content: 56.67
Gene sequence:
>630_bases ATGACCTATTTGCTTGCGACTTATTGGTTGCCGCTTCTGCTTGCCTTGGCTCTCGGCGCGGCTATCGGATTTTATACATT TGCACGGGTTCCCTCCGACAGGTGGTGGTCCCATTGTCCGAGTTGGCTCCGGGCTGCTGGTCTCGTCTTCGTGGTTGGAC TCGTCGTCGCCCTGTTGCACTGGTTGCCGGGGCTCGCGGGGCTTTATCTCGAAACCGCCTTGCTGCTTTTTGCGGCCTAT CTGATTGGCTGTCTCCTTGGAAGCTTTTTGGCAAGCCTCGCGCCGCGTGACAAGGCGGCGGCCGTCACTGAACTTCCCAT CCTGAATGTGGATGATTATCCAGGTCTCCGGCCGCCCGCCCTCACGGGTGCGGATGCAGTGTTCGATGATCTCAAGCGCA TTTCCGGGATTGGTGAGCAGAACGAGGAGCGGTTACATCTCGTCGGCATCTGGTATTTCCGTCAGATCGCGGACTGGAGC GATGAGAATGTGGCATGGATCAGCAGCTATCTGGATCTGCCGGGCTATGTCGCCAAGGATCAATGGGTCGAACAGGCCCG TTCTCTCGCCCAAAATCTCGACACGGATTATACCAAGCGTGTCGATTGGAAATGGCTCCTTCGCAAATAA
Upstream 100 bases:
>100_bases CTGGCTATGGTTCCAGCCGTCCCGTGGCTTCCAATGATACGGAGGAGGGCAGAGCAAAGAACCGCCGTATCGAGTTCACC GTGAAATAAGGAGCGCGATC
Downstream 100 bases:
>100_bases AATCGTCTGATGTCTGACCTCAGGACGCCTAGAGGGTCAGACCAAAAAGTGGCTCCCCCTTTTGGGACCCAATTTGAGCG TTTTCATAAAAGATAGAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NADHUbiquinone Oxidoreductase; NADH Dehydrogenase Subunit E; NADH-Ubiquinone Oxidoreductase Chain E Protein; NADH Dehydrogenase-Ubiquinone Oxidoreductase Chain E; NADH-Quinone Oxidoreductase Chain E; NADH-Quinone Oxidoreductase E Subunit Subfamily; LA Family Protein; 50S Ribosomal Protein L; ABC Transporter
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MTYLLATYWLPLLLALALGAAIGFYTFARVPSDRWWSHCPSWLRAAGLVFVVGLVVALLHWLPGLAGLYLETALLLFAAY LIGCLLGSFLASLAPRDKAAAVTELPILNVDDYPGLRPPALTGADAVFDDLKRISGIGEQNEERLHLVGIWYFRQIADWS DENVAWISSYLDLPGYVAKDQWVEQARSLAQNLDTDYTKRVDWKWLLRK
Sequences:
>Translated_209_residues MTYLLATYWLPLLLALALGAAIGFYTFARVPSDRWWSHCPSWLRAAGLVFVVGLVVALLHWLPGLAGLYLETALLLFAAY LIGCLLGSFLASLAPRDKAAAVTELPILNVDDYPGLRPPALTGADAVFDDLKRISGIGEQNEERLHLVGIWYFRQIADWS DENVAWISSYLDLPGYVAKDQWVEQARSLAQNLDTDYTKRVDWKWLLRK >Mature_208_residues TYLLATYWLPLLLALALGAAIGFYTFARVPSDRWWSHCPSWLRAAGLVFVVGLVVALLHWLPGLAGLYLETALLLFAAYL IGCLLGSFLASLAPRDKAAAVTELPILNVDDYPGLRPPALTGADAVFDDLKRISGIGEQNEERLHLVGIWYFRQIADWSD ENVAWISSYLDLPGYVAKDQWVEQARSLAQNLDTDYTKRVDWKWLLRK
Specific function: Unknown
COG id: COG3743
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23467; Mature: 23336
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYLLATYWLPLLLALALGAAIGFYTFARVPSDRWWSHCPSWLRAAGLVFVVGLVVALLH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH WLPGLAGLYLETALLLFAAYLIGCLLGSFLASLAPRDKAAAVTELPILNVDDYPGLRPPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEECCCCCCCCCCCC LTGADAVFDDLKRISGIGEQNEERLHLVGIWYFRQIADWSDENVAWISSYLDLPGYVAKD CCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHH QWVEQARSLAQNLDTDYTKRVDWKWLLRK HHHHHHHHHHHHCCCHHHHHCCHHHHCCC >Mature Secondary Structure TYLLATYWLPLLLALALGAAIGFYTFARVPSDRWWSHCPSWLRAAGLVFVVGLVVALLH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH WLPGLAGLYLETALLLFAAYLIGCLLGSFLASLAPRDKAAAVTELPILNVDDYPGLRPPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEECCCCCCCCCCCC LTGADAVFDDLKRISGIGEQNEERLHLVGIWYFRQIADWSDENVAWISSYLDLPGYVAKD CCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHH QWVEQARSLAQNLDTDYTKRVDWKWLLRK HHHHHHHHHHHHCCCHHHHHCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA