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The map label for this gene is ynaI [C]

Identifier: 182678163

GI number: 182678163

Start: 1364669

End: 1366186

Strand: Direct

Name: ynaI [C]

Synonym: Bind_1178

Alternate gene names: 182678163

Gene position: 1364669-1366186 (Clockwise)

Preceding gene: 182678160

Following gene: 182678166

Centisome position: 32.72

GC content: 54.74

Gene sequence:

>1518_bases
ATGATGACTGATTATCCGTCTCTCTTGGCAGTTCTCACCGATCCGATCATCCAGACAGGGTCGCTGGCCGTGTTTGGCGC
CCTGATTACGCAAGGAATCTTGCGTAATCATCCCTCAATGCGCCTCATTGGGCAAATTACCTTGTTCGTGGCGCTGACGA
CTTTGCTGATCTACCACGGCATTGTCCCCTATGAACCTGGACCGCCACAGGCTTCCCTTCTTCAGAGCATTTTCTTCGGG
TTGGCGAAAGTGGTCTGGTGGATCAACGTCGCTCTATCGCTGATCAGTTTTGTCCGCGTGTTTCTGATTTTTGAAAAGCA
GCCGCGTGAAATTCGGCTGCTCCAGGACATTGTTGTAGGATTGATTTACGTCGGCGTGGCTCTTTCCATCGTCACGAATG
TGTTCGGTTTTCCTGTTGGAACCCTCATCGCCACATCGGGTGTGGTCGCGATCATTCTCGGTCTCGCGCTGCAGAACACG
CTGAGCGATCTTTTCTCGGGCGTCGCTCTCAATCTCGGCCAGCCCTATGGCATTGGCGACTGGATCGTCGTGAGCGACGT
CATCGAAGGCCGTGTCGTCGAAACCAATTGGCGTGCGACTCATCTTCTCAATGGTGCCAATGATCTCGTTATTTTGCCAA
ACAGCAATCTGGCGAAAGCCAATCTGATCAATATGAGCAGTCCGGATCGGAGCCATGGCGTAAAATTCAGCGTGCGGCTG
GCGCCGACAAGGCCGGCTTTTATCATTGAGGTCATGCGTGATGTCTTGTTGAGCAGCACGAAAATTCTGCGCACCCCCGC
GCCGACCCTTCTCATCAAATCATTGGATGCCCAGGCGATCGAGATCGAATTCTCTTTCCGCGTGATGGATCTCGGCGGGG
TCGGCGCCGCCAAGAATGAGCTTTTTGATCTGATCTATCGCCATGCCAAGGCCGCCGGTTTGAGCTTGGCGCCGTATGAC
GGATCTGAGCCTTCATCGGCGACATCAACAACCGGGGACATGAAGCAGCCCGGAAATTATTACGGACCCTCACGTCTTCT
CGCTGCCTTGCCTCTCTTCGCCTCGTTGACTGAGGAGGAAAGGGAGGCGCTTGCTGAGACCGTATCAAGCCGTACCTATC
ACAAGGATGAAATTGTGGTTGAACAAGGCGTCGTCCAAAATTCTCTCGTGATCGTTCGCCGCGGTGCACTTGTCGTCAAT
CGTATGGAAGAGGATCGTAAGATTGAACTCGGGCGGCTCGCGCCTGGCGATTGTTTTGGCGAGGCAAGCCTGCTCGCCGG
AACCGGATCGCCGGGAACAGTGCAGGCTTTGACCTTTGTGATGGTCTATGAAATCGCGAAAGAGGCTCTCATGCCCCTGA
TGCAGGATCGGCCGGCCATTGCCGAGGAACTGGGTCTGATCCTGTCGCGGCGGGTGCAGAATGAGCAGCATCTTTTCGGA
GGGACAAAAGATGCCGTGGGGATCGCATCGGCTTCGGGATTGGTCGCCCGCATTCGGCAGATATTTCAACTCTCCTGA

Upstream 100 bases:

>100_bases
ATTGAATCGACCAGGATATTTCACGTATCTAATATAAATTTTATAAGAATCCGGCGATGAAATGATCCATCGATGTGTAT
CGCGACAGATTTGATAAAAT

Downstream 100 bases:

>100_bases
AGAATTGTATCTGGCTTTGCCCTAATCAAGAAGCTGTCGCAGAGCTGCCGCTGCAGCGATGGGCGCGCCGACCAGCGCGA
TGAGTGTCAGGGCGCACAGG

Product: cyclic nucleotide-regulated small mechanosensitive ion channel

Products: NA

Alternate protein names: Integral Membrane Protein; Mechanosensitive Channel Protein; Mechanosensitive Ion Channel; Mechanosensitive Ion Channel Protein; Transporter MscS Family; Transmembrane Transporter; Small-Conductance Mechanosensitive Ion Channel; Mechanosensitive Ion Channel Family Protein; Small-Conductance Mechanosensitive Channel; Potassium Efflux System KEFA; Transmembrane Protein; Mechanosensitive Ion Channel MscS; Conserved Membrane Protein; Mechanosensitive Ion Channel Family Protein MscS; Transcriptional Regulator Crp/Fnr Family; Mechanosensitive Ion Channel Protein MscS

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MMTDYPSLLAVLTDPIIQTGSLAVFGALITQGILRNHPSMRLIGQITLFVALTTLLIYHGIVPYEPGPPQASLLQSIFFG
LAKVVWWINVALSLISFVRVFLIFEKQPREIRLLQDIVVGLIYVGVALSIVTNVFGFPVGTLIATSGVVAIILGLALQNT
LSDLFSGVALNLGQPYGIGDWIVVSDVIEGRVVETNWRATHLLNGANDLVILPNSNLAKANLINMSSPDRSHGVKFSVRL
APTRPAFIIEVMRDVLLSSTKILRTPAPTLLIKSLDAQAIEIEFSFRVMDLGGVGAAKNELFDLIYRHAKAAGLSLAPYD
GSEPSSATSTTGDMKQPGNYYGPSRLLAALPLFASLTEEEREALAETVSSRTYHKDEIVVEQGVVQNSLVIVRRGALVVN
RMEEDRKIELGRLAPGDCFGEASLLAGTGSPGTVQALTFVMVYEIAKEALMPLMQDRPAIAEELGLILSRRVQNEQHLFG
GTKDAVGIASASGLVARIRQIFQLS

Sequences:

>Translated_505_residues
MMTDYPSLLAVLTDPIIQTGSLAVFGALITQGILRNHPSMRLIGQITLFVALTTLLIYHGIVPYEPGPPQASLLQSIFFG
LAKVVWWINVALSLISFVRVFLIFEKQPREIRLLQDIVVGLIYVGVALSIVTNVFGFPVGTLIATSGVVAIILGLALQNT
LSDLFSGVALNLGQPYGIGDWIVVSDVIEGRVVETNWRATHLLNGANDLVILPNSNLAKANLINMSSPDRSHGVKFSVRL
APTRPAFIIEVMRDVLLSSTKILRTPAPTLLIKSLDAQAIEIEFSFRVMDLGGVGAAKNELFDLIYRHAKAAGLSLAPYD
GSEPSSATSTTGDMKQPGNYYGPSRLLAALPLFASLTEEEREALAETVSSRTYHKDEIVVEQGVVQNSLVIVRRGALVVN
RMEEDRKIELGRLAPGDCFGEASLLAGTGSPGTVQALTFVMVYEIAKEALMPLMQDRPAIAEELGLILSRRVQNEQHLFG
GTKDAVGIASASGLVARIRQIFQLS
>Mature_505_residues
MMTDYPSLLAVLTDPIIQTGSLAVFGALITQGILRNHPSMRLIGQITLFVALTTLLIYHGIVPYEPGPPQASLLQSIFFG
LAKVVWWINVALSLISFVRVFLIFEKQPREIRLLQDIVVGLIYVGVALSIVTNVFGFPVGTLIATSGVVAIILGLALQNT
LSDLFSGVALNLGQPYGIGDWIVVSDVIEGRVVETNWRATHLLNGANDLVILPNSNLAKANLINMSSPDRSHGVKFSVRL
APTRPAFIIEVMRDVLLSSTKILRTPAPTLLIKSLDAQAIEIEFSFRVMDLGGVGAAKNELFDLIYRHAKAAGLSLAPYD
GSEPSSATSTTGDMKQPGNYYGPSRLLAALPLFASLTEEEREALAETVSSRTYHKDEIVVEQGVVQNSLVIVRRGALVVN
RMEEDRKIELGRLAPGDCFGEASLLAGTGSPGTVQALTFVMVYEIAKEALMPLMQDRPAIAEELGLILSRRVQNEQHLFG
GTKDAVGIASASGLVARIRQIFQLS

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787591, Length=181, Percent_Identity=28.7292817679558, Blast_Score=62, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54579; Mature: 54579

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTDYPSLLAVLTDPIIQTGSLAVFGALITQGILRNHPSMRLIGQITLFVALTTLLIYHG
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
IVPYEPGPPQASLLQSIFFGLAKVVWWINVALSLISFVRVFLIFEKQPREIRLLQDIVVG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LIYVGVALSIVTNVFGFPVGTLIATSGVVAIILGLALQNTLSDLFSGVALNLGQPYGIGD
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
WIVVSDVIEGRVVETNWRATHLLNGANDLVILPNSNLAKANLINMSSPDRSHGVKFSVRL
CEEEEHHHCCEEEECCCCHHHEECCCCCEEEECCCCCCCEEEECCCCCCCCCCCEEEEEE
APTRPAFIIEVMRDVLLSSTKILRTPAPTLLIKSLDAQAIEIEFSFRVMDLGGVGAAKNE
CCCCHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHCCCEEEEEEEEEEEEECCCCCCHHHH
LFDLIYRHAKAAGLSLAPYDGSEPSSATSTTGDMKQPGNYYGPSRLLAALPLFASLTEEE
HHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
REALAETVSSRTYHKDEIVVEQGVVQNSLVIVRRGALVVNRMEEDRKIELGRLAPGDCFG
HHHHHHHHHHCCCCCCHHHHHCCCHHCCEEEEECCHHHHHHCCCCCCEEECCCCCCCCCC
EASLLAGTGSPGTVQALTFVMVYEIAKEALMPLMQDRPAIAEELGLILSRRVQNEQHLFG
CCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHCC
GTKDAVGIASASGLVARIRQIFQLS
CCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMTDYPSLLAVLTDPIIQTGSLAVFGALITQGILRNHPSMRLIGQITLFVALTTLLIYHG
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
IVPYEPGPPQASLLQSIFFGLAKVVWWINVALSLISFVRVFLIFEKQPREIRLLQDIVVG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LIYVGVALSIVTNVFGFPVGTLIATSGVVAIILGLALQNTLSDLFSGVALNLGQPYGIGD
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
WIVVSDVIEGRVVETNWRATHLLNGANDLVILPNSNLAKANLINMSSPDRSHGVKFSVRL
CEEEEHHHCCEEEECCCCHHHEECCCCCEEEECCCCCCCEEEECCCCCCCCCCCEEEEEE
APTRPAFIIEVMRDVLLSSTKILRTPAPTLLIKSLDAQAIEIEFSFRVMDLGGVGAAKNE
CCCCHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHCCCEEEEEEEEEEEEECCCCCCHHHH
LFDLIYRHAKAAGLSLAPYDGSEPSSATSTTGDMKQPGNYYGPSRLLAALPLFASLTEEE
HHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
REALAETVSSRTYHKDEIVVEQGVVQNSLVIVRRGALVVNRMEEDRKIELGRLAPGDCFG
HHHHHHHHHHCCCCCCHHHHHCCCHHCCEEEEECCHHHHHHCCCCCCEEECCCCCCCCCC
EASLLAGTGSPGTVQALTFVMVYEIAKEALMPLMQDRPAIAEELGLILSRRVQNEQHLFG
CCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHCC
GTKDAVGIASASGLVARIRQIFQLS
CCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA