| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182678160
Identifier: 182678160
GI number: 182678160
Start: 1360846
End: 1362570
Strand: Direct
Name: 182678160
Synonym: Bind_1175
Alternate gene names: NA
Gene position: 1360846-1362570 (Clockwise)
Preceding gene: 182678157
Following gene: 182678163
Centisome position: 32.63
GC content: 55.65
Gene sequence:
>1725_bases ATGAACCTTCACATCGAGCGGCCTCACATCGAGCTGATGATCGCCGAATTCCCAAATCTCACGCCGTTGAAGGATCAATT GCGTTTCGGCAATCGTGTGGAAGTGCCTGCCCACCAATTAACGCTGAGCGAACTTGATTTCCTCCGCAATATTTATGAGC AAGCGGGGCCGGATTATCGCACGAGGGCTATGCATCTGCTCACGCTGCACAAGGCCTTGTCGGGCGGCGGCGAGCGTTTC AAGCCGGAAGATCTCGAAAATGTCGTCCCGGCAATCGCCCGTTATCTCGCCACGGACGGCATTCGCGGCTGGCTGTTCAC CTCGCATGTTGCCAATCGGCCGCTACCCTATGTCGTGACCCGCCTCGATTACACACCGCCGGCCGAAGATTCCGCCGGCA AGATCTTTCTGGAACTGAAAGCTAATGTCAAAGGCTCGGTGACAACCCAGGTTCTGCGTATCGCCGCGACTGATATTGGC GGCAAGACGGTTGGTGAAATTTTCGCCAGCAAGGGTTTCTTGAAAGAAACAGCAGAATTGATCGAGGACTATGACCGCAC GGTCGAAAAATATTTCGACTGGCGCGCGCAATATGGCGCGCAATTTTCTGCGCGTGGCACCGGCTTTTATGCGGAAGATC CGAATTCCACCCATAGGGATACGGACTGGACGCGCAAAGATGTCATCGTCCTTTCATCGAGCGGCGGCGACGCCCGCCTT GTCAATGATGAAGGCATGTTGACGAGCCGCACCCTGACCATGGATGCGACCGGTGATATACTTGGCCAATATCTGAAAAA GGCCGCCAAGAGCGATAAATATAACGCCGAGGACGAGGTCGAGGAATCGCAAAAGGAGATCCCGAAAGGGCTCTTCACGC AATTGCCGATCCATGCCTATATTCTGATGTTCCATCTCGAACTGCACCATTACATCTGGGTGCATGTCGATGATATGAAT CCGTATGAATATCAGCCGGAGTTGAAGGACAAACTGGTCCTGCCGCAGGAGCAGACCGACCTCATCGATATTCTGACGGC CGAGATGGACGTCCTGATGGATGATATCGTCGCCGGTAAATCGGGCGGCACGACCGTGCTTTGCGCGGGTCCGGCGGGTG TCGGTAAGACGCTGACAGCGGAAGTCTATTCGGAAATCATCCGGCGCCCCCTCTATCGCGTTCATTCCGGTCAGCTCGGC CTCAATGTGGCGCAGATGGAACAGGCCCTGAAGGATGTCTTGACCCGCGCGCAGCGCTGGGGCGCGGTCATGCTGATCGA TGAGGCCGATGTCTATATCAAGAAACGCGATGACAATATTGCCACCAATGCGGTCGTCGGCGTGTTCCTGCGTGTGCTCG AATATTTCAATGGCCTTTTGTTCATGACGACCAATCGCGTCGACGATATCGATGAAGCGATCGTGTCGCGTTGCATCGCC ATGATCAAATTCCATCCGCCGAGCGCGGAGGCCCGTCGGCGCATCTGGGGCGTGATGACGGAGCAATTCAATCTGCCTGT TGAGGAGAAGCTCAAGGACGAACTCGTCCATATGTTCCCCAGTGCGACAGGCCGCGATATCAAGGGCCTTACCAAGCTCA CCGCGAAATTCTGCAGCCATAAAAGCGTGCTGCCGACGTCGGACGTGTTCATCCGCTGCTCGGTGTTCCGTGGCCTTGAT CTCGCGCCGGAATATTCCGAACCGCTCGCCGAAGCGGCTGAATAA
Upstream 100 bases:
>100_bases CCTCCACACGCGTGGGATGGCTTTGGCGCAGCCGAAAGGAACCAAGAGGCGCTGTTTGCGGCCCTTGGTATGAGCTCATG CGGATCGGAGAGCGAAGAGG
Downstream 100 bases:
>100_bases GGATTTATTATCTTAGCCGAAAACCGTGGAGCCAATTCTGATCAATCTGATCGGAATTGGCTCTCCCTTTGAAATTAAGT GCTTTCTATCGAACGGCTAA
Product: ATPase central domain-containing protein
Products: NA
Alternate protein names: AAA ATPase Central Domain Protein; ATPase AAA Family Protein; AAA Family ATPase; ATPase; AAA ATPase; AAA ATPase Central Domain-Containing Protein; AAA ATPase Central Region; AAA ATPase Family Protein; ATPase AAA Family; AAA-Family ATPase Protein; ATPases Of AAA+ Class; ATPase AAA Superfamily; Aaa Family ATPase; AAA+ Family ATPase; Elongation Factor P; ATPase Protein
Number of amino acids: Translated: 574; Mature: 574
Protein sequence:
>574_residues MNLHIERPHIELMIAEFPNLTPLKDQLRFGNRVEVPAHQLTLSELDFLRNIYEQAGPDYRTRAMHLLTLHKALSGGGERF KPEDLENVVPAIARYLATDGIRGWLFTSHVANRPLPYVVTRLDYTPPAEDSAGKIFLELKANVKGSVTTQVLRIAATDIG GKTVGEIFASKGFLKETAELIEDYDRTVEKYFDWRAQYGAQFSARGTGFYAEDPNSTHRDTDWTRKDVIVLSSSGGDARL VNDEGMLTSRTLTMDATGDILGQYLKKAAKSDKYNAEDEVEESQKEIPKGLFTQLPIHAYILMFHLELHHYIWVHVDDMN PYEYQPELKDKLVLPQEQTDLIDILTAEMDVLMDDIVAGKSGGTTVLCAGPAGVGKTLTAEVYSEIIRRPLYRVHSGQLG LNVAQMEQALKDVLTRAQRWGAVMLIDEADVYIKKRDDNIATNAVVGVFLRVLEYFNGLLFMTTNRVDDIDEAIVSRCIA MIKFHPPSAEARRRIWGVMTEQFNLPVEEKLKDELVHMFPSATGRDIKGLTKLTAKFCSHKSVLPTSDVFIRCSVFRGLD LAPEYSEPLAEAAE
Sequences:
>Translated_574_residues MNLHIERPHIELMIAEFPNLTPLKDQLRFGNRVEVPAHQLTLSELDFLRNIYEQAGPDYRTRAMHLLTLHKALSGGGERF KPEDLENVVPAIARYLATDGIRGWLFTSHVANRPLPYVVTRLDYTPPAEDSAGKIFLELKANVKGSVTTQVLRIAATDIG GKTVGEIFASKGFLKETAELIEDYDRTVEKYFDWRAQYGAQFSARGTGFYAEDPNSTHRDTDWTRKDVIVLSSSGGDARL VNDEGMLTSRTLTMDATGDILGQYLKKAAKSDKYNAEDEVEESQKEIPKGLFTQLPIHAYILMFHLELHHYIWVHVDDMN PYEYQPELKDKLVLPQEQTDLIDILTAEMDVLMDDIVAGKSGGTTVLCAGPAGVGKTLTAEVYSEIIRRPLYRVHSGQLG LNVAQMEQALKDVLTRAQRWGAVMLIDEADVYIKKRDDNIATNAVVGVFLRVLEYFNGLLFMTTNRVDDIDEAIVSRCIA MIKFHPPSAEARRRIWGVMTEQFNLPVEEKLKDELVHMFPSATGRDIKGLTKLTAKFCSHKSVLPTSDVFIRCSVFRGLD LAPEYSEPLAEAAE >Mature_574_residues MNLHIERPHIELMIAEFPNLTPLKDQLRFGNRVEVPAHQLTLSELDFLRNIYEQAGPDYRTRAMHLLTLHKALSGGGERF KPEDLENVVPAIARYLATDGIRGWLFTSHVANRPLPYVVTRLDYTPPAEDSAGKIFLELKANVKGSVTTQVLRIAATDIG GKTVGEIFASKGFLKETAELIEDYDRTVEKYFDWRAQYGAQFSARGTGFYAEDPNSTHRDTDWTRKDVIVLSSSGGDARL VNDEGMLTSRTLTMDATGDILGQYLKKAAKSDKYNAEDEVEESQKEIPKGLFTQLPIHAYILMFHLELHHYIWVHVDDMN PYEYQPELKDKLVLPQEQTDLIDILTAEMDVLMDDIVAGKSGGTTVLCAGPAGVGKTLTAEVYSEIIRRPLYRVHSGQLG LNVAQMEQALKDVLTRAQRWGAVMLIDEADVYIKKRDDNIATNAVVGVFLRVLEYFNGLLFMTTNRVDDIDEAIVSRCIA MIKFHPPSAEARRRIWGVMTEQFNLPVEEKLKDELVHMFPSATGRDIKGLTKLTAKFCSHKSVLPTSDVFIRCSVFRGLD LAPEYSEPLAEAAE
Specific function: Unknown
COG id: COG0464
COG function: function code O; ATPases of the AAA+ class
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64539; Mature: 64539
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLHIERPHIELMIAEFPNLTPLKDQLRFGNRVEVPAHQLTLSELDFLRNIYEQAGPDYR CCCEECCCCEEEEEECCCCCCCCHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCHH TRAMHLLTLHKALSGGGERFKPEDLENVVPAIARYLATDGIRGWLFTSHVANRPLPYVVT HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHEEEHHHCCCCCCEEEE RLDYTPPAEDSAGKIFLELKANVKGSVTTQVLRIAATDIGGKTVGEIFASKGFLKETAEL ECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHH IEDYDRTVEKYFDWRAQYGAQFSARGTGFYAEDPNSTHRDTDWTRKDVIVLSSSGGDARL HHHHHHHHHHHHHHHHHHCCCEECCCCCEECCCCCCCCCCCCCCCCCEEEEECCCCCEEE VNDEGMLTSRTLTMDATGDILGQYLKKAAKSDKYNAEDEVEESQKEIPKGLFTQLPIHAY ECCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHCCHHHH ILMFHLELHHYIWVHVDDMNPYEYQPELKDKLVLPQEQTDLIDILTAEMDVLMDDIVAGK HHHHHHEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC SGGTTVLCAGPAGVGKTLTAEVYSEIIRRPLYRVHSGQLGLNVAQMEQALKDVLTRAQRW CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHC GAVMLIDEADVYIKKRDDNIATNAVVGVFLRVLEYFNGLLFMTTNRVDDIDEAIVSRCIA CEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHH MIKFHPPSAEARRRIWGVMTEQFNLPVEEKLKDELVHMFPSATGRDIKGLTKLTAKFCSH HHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC KSVLPTSDVFIRCSVFRGLDLAPEYSEPLAEAAE CCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MNLHIERPHIELMIAEFPNLTPLKDQLRFGNRVEVPAHQLTLSELDFLRNIYEQAGPDYR CCCEECCCCEEEEEECCCCCCCCHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCHH TRAMHLLTLHKALSGGGERFKPEDLENVVPAIARYLATDGIRGWLFTSHVANRPLPYVVT HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHEEEHHHCCCCCCEEEE RLDYTPPAEDSAGKIFLELKANVKGSVTTQVLRIAATDIGGKTVGEIFASKGFLKETAEL ECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHH IEDYDRTVEKYFDWRAQYGAQFSARGTGFYAEDPNSTHRDTDWTRKDVIVLSSSGGDARL HHHHHHHHHHHHHHHHHHCCCEECCCCCEECCCCCCCCCCCCCCCCCEEEEECCCCCEEE VNDEGMLTSRTLTMDATGDILGQYLKKAAKSDKYNAEDEVEESQKEIPKGLFTQLPIHAY ECCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHCCHHHH ILMFHLELHHYIWVHVDDMNPYEYQPELKDKLVLPQEQTDLIDILTAEMDVLMDDIVAGK HHHHHHEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC SGGTTVLCAGPAGVGKTLTAEVYSEIIRRPLYRVHSGQLGLNVAQMEQALKDVLTRAQRW CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHC GAVMLIDEADVYIKKRDDNIATNAVVGVFLRVLEYFNGLLFMTTNRVDDIDEAIVSRCIA CEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHH MIKFHPPSAEARRRIWGVMTEQFNLPVEEKLKDELVHMFPSATGRDIKGLTKLTAKFCSH HHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC KSVLPTSDVFIRCSVFRGLDLAPEYSEPLAEAAE CCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA