| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182678030
Identifier: 182678030
GI number: 182678030
Start: 1196460
End: 1197809
Strand: Direct
Name: 182678030
Synonym: Bind_1044
Alternate gene names: NA
Gene position: 1196460-1197809 (Clockwise)
Preceding gene: 182678029
Following gene: 182678037
Centisome position: 28.69
GC content: 58.52
Gene sequence:
>1350_bases ATGGGTGTCAATCTACCGAGGGACACTACACTAGCCGGGTTTCGGCTGACACAGGTCAAGCAGGCATTAAAGGTGTATGC GCGAACTGGCCAAGAGGAGAACTTCTTCGAGGCGAAGTCATTCGCACCCTCGCGACTGGAAGCGGCTGCGCTCTACGAGG AAATGCTCGAGCGAAAGCTCATCGATCCGGAGGCCGTATCGCACGAGCACCATTTGACCGAGGCTGGGCTAGCGATTGCC GGTGGGAAAACGCGTCGTAGCCCGTTGCGCACAGCCCGCCGGGTTTTGGATGATCTACTGGCGCGTATTGAGCACATGAA CGAGCAGTCGGCGCCGCTCAACCTTGTGGAGCGGGTCTGGCTGTTCGGATCGGTCATGCGTGGGCAGGCAACAGTCGGTG ATATCGACCTCGCAATCGAGACCGCGCACAACCCGGCATTTGATGACGACGCATCACACTCGACTCGACTTCGTGAGTTG GTTGACCAAGCACCAGATCACCTCCTCTTCCTTCAGAAGCTATACTGGCATGAGGAGCGAGGCATCTTTGGCAAGCGCCG GCATCCGCTCCTCGCCGGTGCTCATATCGGTTCCGGCGAACTCCAGCGACTTGGAGTACCTTGCCAGTTGATCTTTGACC GAAGCAGGGGCGGCAGGGTTGACGACGAAGTAATCCCCCGACACCCAGACTCCCCGGGACGCAGCAACGAGATGAGCGCT CCAAGGGAATTGCCCGACCTCACGCCGCTTTCCTCGGTGCCTCGACCGATGGATGCTCGTTGGATGTCTGCACACAAGAT CGACGGGAGCATCTCTCCCCACCGGCTATTCACTGAGCGGCGGACAGTCCCGGGTTCTGGCTCCTACGTGATGACCGATG ACACCGAACTCCGCTGGCACGACTGGTGCCCGGCCTCGTTGAAAACCGGCGGCTATGACGGAGTGTCGAAGGTCCTTTTG AAGTATCAAGAAACCTGGTCCGACCCGAAGGGGCGGGACGCGGCATCCATGGTGCTGCGACGGGAGATTCGGGACCTTGA AACGGAGATCGAACTGCGTGTCGAGCTTTCCAACTTTGAGCGTCCACGTCGGCTGAAGCCAAGACCAGATCGTGCATTGG TTCATCTTTGCGGGATGGCGGCTATGATCATGTGCGGCGACATCCACCGCCAGACCATGCGTTTGAACGAACGCCAAGTA CACAAGATGATCGTTATCGACGTTGATACGAGCGGATTACCCGACGAGATCCGAGAGACCGCACCGGTCTGGATCAAAAG TCTGCTGGAGGAGCTAGCACCTCCAGCGAGCTCGAACGAAGATAGTCACTCTGAGGTTGAACCCACCTGA
Upstream 100 bases:
>100_bases GACATCGCCGGTGCCACGGTCAAGATGCGCTGATCTCTCTTGATCAACCTTGGTATTGAACGGCTATTTCCGTTATGGCG CACCACACTTGGAGGTAGCG
Downstream 100 bases:
>100_bases CCAAGTGGGAACCTTCCGCTTCGTGATCCCCCGTGCTGTTGCCTTTGCTATTGCAACGATGACGGCTCTCCAGCCTCCGG AAGGGATGGTCTCCGCCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MGVNLPRDTTLAGFRLTQVKQALKVYARTGQEENFFEAKSFAPSRLEAAALYEEMLERKLIDPEAVSHEHHLTEAGLAIA GGKTRRSPLRTARRVLDDLLARIEHMNEQSAPLNLVERVWLFGSVMRGQATVGDIDLAIETAHNPAFDDDASHSTRLREL VDQAPDHLLFLQKLYWHEERGIFGKRRHPLLAGAHIGSGELQRLGVPCQLIFDRSRGGRVDDEVIPRHPDSPGRSNEMSA PRELPDLTPLSSVPRPMDARWMSAHKIDGSISPHRLFTERRTVPGSGSYVMTDDTELRWHDWCPASLKTGGYDGVSKVLL KYQETWSDPKGRDAASMVLRREIRDLETEIELRVELSNFERPRRLKPRPDRALVHLCGMAAMIMCGDIHRQTMRLNERQV HKMIVIDVDTSGLPDEIRETAPVWIKSLLEELAPPASSNEDSHSEVEPT
Sequences:
>Translated_449_residues MGVNLPRDTTLAGFRLTQVKQALKVYARTGQEENFFEAKSFAPSRLEAAALYEEMLERKLIDPEAVSHEHHLTEAGLAIA GGKTRRSPLRTARRVLDDLLARIEHMNEQSAPLNLVERVWLFGSVMRGQATVGDIDLAIETAHNPAFDDDASHSTRLREL VDQAPDHLLFLQKLYWHEERGIFGKRRHPLLAGAHIGSGELQRLGVPCQLIFDRSRGGRVDDEVIPRHPDSPGRSNEMSA PRELPDLTPLSSVPRPMDARWMSAHKIDGSISPHRLFTERRTVPGSGSYVMTDDTELRWHDWCPASLKTGGYDGVSKVLL KYQETWSDPKGRDAASMVLRREIRDLETEIELRVELSNFERPRRLKPRPDRALVHLCGMAAMIMCGDIHRQTMRLNERQV HKMIVIDVDTSGLPDEIRETAPVWIKSLLEELAPPASSNEDSHSEVEPT >Mature_448_residues GVNLPRDTTLAGFRLTQVKQALKVYARTGQEENFFEAKSFAPSRLEAAALYEEMLERKLIDPEAVSHEHHLTEAGLAIAG GKTRRSPLRTARRVLDDLLARIEHMNEQSAPLNLVERVWLFGSVMRGQATVGDIDLAIETAHNPAFDDDASHSTRLRELV DQAPDHLLFLQKLYWHEERGIFGKRRHPLLAGAHIGSGELQRLGVPCQLIFDRSRGGRVDDEVIPRHPDSPGRSNEMSAP RELPDLTPLSSVPRPMDARWMSAHKIDGSISPHRLFTERRTVPGSGSYVMTDDTELRWHDWCPASLKTGGYDGVSKVLLK YQETWSDPKGRDAASMVLRREIRDLETEIELRVELSNFERPRRLKPRPDRALVHLCGMAAMIMCGDIHRQTMRLNERQVH KMIVIDVDTSGLPDEIRETAPVWIKSLLEELAPPASSNEDSHSEVEPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50725; Mature: 50594
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVNLPRDTTLAGFRLTQVKQALKVYARTGQEENFFEAKSFAPSRLEAAALYEEMLERKL CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHC IDPEAVSHEHHLTEAGLAIAGGKTRRSPLRTARRVLDDLLARIEHMNEQSAPLNLVERVW CCHHHHCCHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LFGSVMRGQATVGDIDLAIETAHNPAFDDDASHSTRLRELVDQAPDHLLFLQKLYWHEER HHHHHHCCCCEECCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHC GIFGKRRHPLLAGAHIGSGELQRLGVPCQLIFDRSRGGRVDDEVIPRHPDSPGRSNEMSA CCCCCCCCCEEEECCCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC PRELPDLTPLSSVPRPMDARWMSAHKIDGSISPHRLFTERRTVPGSGSYVMTDDTELRWH CCCCCCCCCHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCEEEC DWCPASLKTGGYDGVSKVLLKYQETWSDPKGRDAASMVLRREIRDLETEIELRVELSNFE CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCC RPRRLKPRPDRALVHLCGMAAMIMCGDIHRQTMRLNERQVHKMIVIDVDTSGLPDEIRET CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEEEEECCCCCCHHHHHH APVWIKSLLEELAPPASSNEDSHSEVEPT HHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure GVNLPRDTTLAGFRLTQVKQALKVYARTGQEENFFEAKSFAPSRLEAAALYEEMLERKL CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHC IDPEAVSHEHHLTEAGLAIAGGKTRRSPLRTARRVLDDLLARIEHMNEQSAPLNLVERVW CCHHHHCCHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LFGSVMRGQATVGDIDLAIETAHNPAFDDDASHSTRLRELVDQAPDHLLFLQKLYWHEER HHHHHHCCCCEECCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHC GIFGKRRHPLLAGAHIGSGELQRLGVPCQLIFDRSRGGRVDDEVIPRHPDSPGRSNEMSA CCCCCCCCCEEEECCCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC PRELPDLTPLSSVPRPMDARWMSAHKIDGSISPHRLFTERRTVPGSGSYVMTDDTELRWH CCCCCCCCCHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCEEEC DWCPASLKTGGYDGVSKVLLKYQETWSDPKGRDAASMVLRREIRDLETEIELRVELSNFE CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCC RPRRLKPRPDRALVHLCGMAAMIMCGDIHRQTMRLNERQVHKMIVIDVDTSGLPDEIRET CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEEEEECCCCCCHHHHHH APVWIKSLLEELAPPASSNEDSHSEVEPT HHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA