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The map label for this gene is 182678037

Identifier: 182678037

GI number: 182678037

Start: 1208115

End: 1208678

Strand: Direct

Name: 182678037

Synonym: Bind_1051

Alternate gene names: NA

Gene position: 1208115-1208678 (Clockwise)

Preceding gene: 182678030

Following gene: 182678038

Centisome position: 28.97

GC content: 58.16

Gene sequence:

>564_bases
ATGTTCATCCAGACTGAAGCCACACCCAATCCCGCAACTTTGAAGTTCCTTCCAGGCCGGCCCGTCATGCGGCTTGGCAC
GCTCGATATTCGTGAAGCCGATGGCGCCAAGAAATCGCCTCTTGCAGAAGCGCTTTTCGCGCTCGAGGGCGTCTCCGGTG
TCTTCTTTGGCTCCGATTTCATTTCGGTGACGCGGCAGCAGGGGGACTGGCAGGACATCAAGCCGGCGGTGCTCGGCGCG
ATCATGGAGCATTATCTCTCCGGTGCGCCGCTTCTGACGGATGAAGCTGATCTGCAGCCGCAAAATGATGGCGAAGAATT
TTACGCCGAAGCCGATGCGCATACGGTCGCGACCATCAAACAATTGATCGAATCGCATGTGCGTCCGGCCGTCGCCAAGG
ATGGCGGTGATATCAAGTTCCGCGGCTTTCGCGAGGGAACCGTCTATCTGGCCATGAAAGGGTCCTGCTCGGGTTGCCCG
TCATCGTCCGCGACCTTGCGGCATGGCGTGCAGAATCTCCTGAAACATTATGTGCCGGAAGTGGTGAGCGTCGAGCAGAT
CTGA

Upstream 100 bases:

>100_bases
TCGATTCTGAAAATGATTCTTTTTCCGGCGCGATGCATGAGGTGTTGATGCTGTAACCCTGTCCAACTCCGGCCTTGAAC
CGGACGTTTGGGAGAAATTC

Downstream 100 bases:

>100_bases
TCCGTCGCCAGGCGGCTTAACAGTCTCGGGCGGAAGAGGGGCAATGCGCGCGCTCTCCGCCCGTTCTTTCAAAACGCTGG
CTCTTTTCGCGCGATATGCG

Product: scaffold protein Nfu/NifU

Products: NA

Alternate protein names: NifU Domain Protein; NifU Domain-Containing Protein; Nitrogen-Fixing NifU Domain Protein; Nitrogen-Fixing NifU-Like; Nitrogen Fixation Protein; NifU-Like Domain Protein; NifU Related Protein; NifU-Like Protein; NifU-Like Domain-Containing Protein; NifU Protein; Nitrogen-Fixing NifU-Like Protein; Scaffold Protein Nfu/Nifu; NifU Family Protein; Thioredoxin-Like Protein; Nitrogen-Fixing NifU; NifU Iron-Sulphur Cluster Scaffold Protein; Nif System Fes Cluster Assembly Nifu Family Protein; Thioredoxin-Related Protein; Thioredoxin-Like Domain Protein; Scaffold Protein Nfu/NifU N Terminal Domain Protein; Nitrogen-Fixing Nifu Domain Protein; Nitrogen-Fixing Protein NifU; Nitrogen-Fixing NifU Domain-Containing Protein; Nitrogen Fixing Thioredoxin-Like Protein NifU; Nitrogen-Fixing Protein; NFU1 Iron-Sulfur Cluster Scaffold-Like Protein; Fe-S Cluster Assembly Protein NFU; Nifu Protein; NifU Domain Containing Protein; HIRA-Interacting; Nitrogen-Fixing NifU C-Terminal; Scaffold Protein Nfu/NifU-Like Protein; Scaffold Protein Nfu/NifU N Terminal; NitrogeN-Fixing Nifu Domain Protein; Thioredoxin

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MFIQTEATPNPATLKFLPGRPVMRLGTLDIREADGAKKSPLAEALFALEGVSGVFFGSDFISVTRQQGDWQDIKPAVLGA
IMEHYLSGAPLLTDEADLQPQNDGEEFYAEADAHTVATIKQLIESHVRPAVAKDGGDIKFRGFREGTVYLAMKGSCSGCP
SSSATLRHGVQNLLKHYVPEVVSVEQI

Sequences:

>Translated_187_residues
MFIQTEATPNPATLKFLPGRPVMRLGTLDIREADGAKKSPLAEALFALEGVSGVFFGSDFISVTRQQGDWQDIKPAVLGA
IMEHYLSGAPLLTDEADLQPQNDGEEFYAEADAHTVATIKQLIESHVRPAVAKDGGDIKFRGFREGTVYLAMKGSCSGCP
SSSATLRHGVQNLLKHYVPEVVSVEQI
>Mature_187_residues
MFIQTEATPNPATLKFLPGRPVMRLGTLDIREADGAKKSPLAEALFALEGVSGVFFGSDFISVTRQQGDWQDIKPAVLGA
IMEHYLSGAPLLTDEADLQPQNDGEEFYAEADAHTVATIKQLIESHVRPAVAKDGGDIKFRGFREGTVYLAMKGSCSGCP
SSSATLRHGVQNLLKHYVPEVVSVEQI

Specific function: Unknown

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI50593025, Length=189, Percent_Identity=47.0899470899471, Blast_Score=189, Evalue=9e-49,
Organism=Homo sapiens, GI50593021, Length=189, Percent_Identity=47.0899470899471, Blast_Score=189, Evalue=1e-48,
Organism=Homo sapiens, GI50593023, Length=106, Percent_Identity=45.2830188679245, Blast_Score=105, Evalue=3e-23,
Organism=Homo sapiens, GI50593019, Length=106, Percent_Identity=45.2830188679245, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17541876, Length=191, Percent_Identity=42.4083769633508, Blast_Score=167, Evalue=3e-42,
Organism=Saccharomyces cerevisiae, GI6322811, Length=206, Percent_Identity=33.0097087378641, Blast_Score=117, Evalue=2e-27,
Organism=Drosophila melanogaster, GI45551492, Length=189, Percent_Identity=51.8518518518518, Blast_Score=192, Evalue=1e-49,
Organism=Drosophila melanogaster, GI24643765, Length=189, Percent_Identity=51.8518518518518, Blast_Score=192, Evalue=1e-49,
Organism=Drosophila melanogaster, GI45556188, Length=189, Percent_Identity=51.8518518518518, Blast_Score=192, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20216; Mature: 20216

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIQTEATPNPATLKFLPGRPVMRLGTLDIREADGAKKSPLAEALFALEGVSGVFFGSDF
CEEECCCCCCCCEEEEECCCCEEEECCCEEECCCCCCCCHHHHHHHHHHCCCEEEECCHH
ISVTRQQGDWQDIKPAVLGAIMEHYLSGAPLLTDEADLQPQNDGEEFYAEADAHTVATIK
HHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHH
QLIESHVRPAVAKDGGDIKFRGFREGTVYLAMKGSCSGCPSSSATLRHGVQNLLKHYVPE
HHHHHHCCCCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
VVSVEQI
HHHHCCC
>Mature Secondary Structure
MFIQTEATPNPATLKFLPGRPVMRLGTLDIREADGAKKSPLAEALFALEGVSGVFFGSDF
CEEECCCCCCCCEEEEECCCCEEEECCCEEECCCCCCCCHHHHHHHHHHCCCEEEECCHH
ISVTRQQGDWQDIKPAVLGAIMEHYLSGAPLLTDEADLQPQNDGEEFYAEADAHTVATIK
HHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHH
QLIESHVRPAVAKDGGDIKFRGFREGTVYLAMKGSCSGCPSSSATLRHGVQNLLKHYVPE
HHHHHHCCCCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
VVSVEQI
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA