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The map label for this gene is fdhD [H]

Identifier: 182677981

GI number: 182677981

Start: 1140212

End: 1141099

Strand: Direct

Name: fdhD [H]

Synonym: Bind_0994

Alternate gene names: 182677981

Gene position: 1140212-1141099 (Clockwise)

Preceding gene: 182677980

Following gene: 182677983

Centisome position: 27.34

GC content: 53.94

Gene sequence:

>888_bases
ATGACCGTGTCTAGCCGTGACGCTCAAACAGATGCCACACTGGACAGTTCCTCGACGGACAAGGGTTCACATACATCTGC
GTCCATCATGGCACATTGGCCAGCCCTTTGCGTCTCGACCGATGGTGTCAATGAGGAAAACATAACCCTGGCAATAGCGG
ATGAAACGCCCATCAGCCTGATTTACAATACTATTCCTTATGCCGTCATGATGGCGACCGCTCAGGATATCGAGGATTTC
GCGATCGGATTCTCTCTCACCGAGGGCATCGTCTCCTCTTACGAAGCCATTCGTGAGATGACAATTCAGAAGACAACCGC
AGGCTATGAGGTTCATCTCCATATAGCCGGTTCAGATTTCCAGCGTCTTCTTCAATCGGGTCGACGAGCGATGGTGGGGC
GTACCGGATGCGGAATCTGCGGAGCCGAGACGGCGGATACGCTTATCAAACCGTTGCCGACGATCGCCCAAGGGAAAAGG
ATCGCGCTATCCGCATTGCGGCGAGCATTAGAAGATCTGGAGACGCGTCAATCTCTCAACGCCGTGGTGCATATGGTTCA
TGGTGCCGCCTGGGTCTCGCCGGAGGCCGAAATTCTTTTCGTGCGGGAAGATATCGGTCGCCATAATGCGCTGGACAAAT
TGATTGGAGCGGGACTGCGCAACAAAATCGATTTCAGTGAAGGCTTTTGTCTCATTACCAGTCGCTGTTCCTATGAGATG
GTGCAGAAGGCCGTCATGGCCGGCATGCCGATTCTTGTCGCTATTTCAGCCCCCACCATTCGCGCTCTTGGTGTTGCGGA
AGAGAGGGGATTGACCCTGGTGGCGTTGGCGCGACAGAGGCAGCAAGTGATTTTTACAGGAGCCAGCAGGATCGATCTTG
AACGCTGA

Upstream 100 bases:

>100_bases
GAGATTGTGTTTGACACAGAATGGTTTGATCCATTCTTCAACGTGAATACGCCGGAGGATTATCAGGCGGCGATCGAAAT
GCTTGAGCATAAGGTGGATC

Downstream 100 bases:

>100_bases
GGTTAATCCGGCGCCATGCCTTTTTCGCTGAGTTCCTTGAGGGCCTGCGGTGTCTTAGAAAGATGTGTCAGCCCCATGCC
GCGCAATATATTCGGTGCCT

Product: formate dehydrogenase family accessory protein FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MTVSSRDAQTDATLDSSSTDKGSHTSASIMAHWPALCVSTDGVNEENITLAIADETPISLIYNTIPYAVMMATAQDIEDF
AIGFSLTEGIVSSYEAIREMTIQKTTAGYEVHLHIAGSDFQRLLQSGRRAMVGRTGCGICGAETADTLIKPLPTIAQGKR
IALSALRRALEDLETRQSLNAVVHMVHGAAWVSPEAEILFVREDIGRHNALDKLIGAGLRNKIDFSEGFCLITSRCSYEM
VQKAVMAGMPILVAISAPTIRALGVAEERGLTLVALARQRQQVIFTGASRIDLER

Sequences:

>Translated_295_residues
MTVSSRDAQTDATLDSSSTDKGSHTSASIMAHWPALCVSTDGVNEENITLAIADETPISLIYNTIPYAVMMATAQDIEDF
AIGFSLTEGIVSSYEAIREMTIQKTTAGYEVHLHIAGSDFQRLLQSGRRAMVGRTGCGICGAETADTLIKPLPTIAQGKR
IALSALRRALEDLETRQSLNAVVHMVHGAAWVSPEAEILFVREDIGRHNALDKLIGAGLRNKIDFSEGFCLITSRCSYEM
VQKAVMAGMPILVAISAPTIRALGVAEERGLTLVALARQRQQVIFTGASRIDLER
>Mature_294_residues
TVSSRDAQTDATLDSSSTDKGSHTSASIMAHWPALCVSTDGVNEENITLAIADETPISLIYNTIPYAVMMATAQDIEDFA
IGFSLTEGIVSSYEAIREMTIQKTTAGYEVHLHIAGSDFQRLLQSGRRAMVGRTGCGICGAETADTLIKPLPTIAQGKRI
ALSALRRALEDLETRQSLNAVVHMVHGAAWVSPEAEILFVREDIGRHNALDKLIGAGLRNKIDFSEGFCLITSRCSYEMV
QKAVMAGMPILVAISAPTIRALGVAEERGLTLVALARQRQQVIFTGASRIDLER

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=240, Percent_Identity=40, Blast_Score=183, Evalue=1e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 31850; Mature: 31719

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSSRDAQTDATLDSSSTDKGSHTSASIMAHWPALCVSTDGVNEENITLAIADETPISL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCCCEEEEEECCCCHHH
IYNTIPYAVMMATAQDIEDFAIGFSLTEGIVSSYEAIREMTIQKTTAGYEVHLHIAGSDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHH
QRLLQSGRRAMVGRTGCGICGAETADTLIKPLPTIAQGKRIALSALRRALEDLETRQSLN
HHHHHCCCCEECCCCCCCCCCCHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHH
AVVHMVHGAAWVSPEAEILFVREDIGRHNALDKLIGAGLRNKIDFSEGFCLITSRCSYEM
HHHHHHHCCEEECCCCEEEEEEHHCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHH
VQKAVMAGMPILVAISAPTIRALGVAEERGLTLVALARQRQQVIFTGASRIDLER
HHHHHHCCCCEEEEECCCCEEEECCHHHCCCEEEEEHHHCCEEEEECCCCCCCCC
>Mature Secondary Structure 
TVSSRDAQTDATLDSSSTDKGSHTSASIMAHWPALCVSTDGVNEENITLAIADETPISL
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCCCEEEEEECCCCHHH
IYNTIPYAVMMATAQDIEDFAIGFSLTEGIVSSYEAIREMTIQKTTAGYEVHLHIAGSDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHH
QRLLQSGRRAMVGRTGCGICGAETADTLIKPLPTIAQGKRIALSALRRALEDLETRQSLN
HHHHHCCCCEECCCCCCCCCCCHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHH
AVVHMVHGAAWVSPEAEILFVREDIGRHNALDKLIGAGLRNKIDFSEGFCLITSRCSYEM
HHHHHHHCCEEECCCCEEEEEEHHCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHH
VQKAVMAGMPILVAISAPTIRALGVAEERGLTLVALARQRQQVIFTGASRIDLER
HHHHHHCCCCEEEEECCCCEEEECCHHHCCCEEEEEHHHCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]