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The map label for this gene is ydiU [C]

Identifier: 182677983

GI number: 182677983

Start: 1142570

End: 1144045

Strand: Direct

Name: ydiU [C]

Synonym: Bind_0997

Alternate gene names: 182677983

Gene position: 1142570-1144045 (Clockwise)

Preceding gene: 182677981

Following gene: 182677984

Centisome position: 27.4

GC content: 59.42

Gene sequence:

>1476_bases
ATGACTCGATTTGCTTTTGAACATACTTATGGGCGTTTGCCGGATCGATTTTTTGCCCGGGTTTCTCCGACCCCTGTCGC
CTCGCCCCGATTGATCCGGTTGAACGAGGCCCTTGCGACGGATCTCCAGCTCGATGCCGCATCGCTTCTGAGCCCGGAAG
GGGCCGAGATCTTCGCGGGGAATCGCATTCCGGACGAAGCTGAACCCATAGCCATTGCTTATGCGGGCCACCAGTTTGGG
CAATTCGTGCCGCAGCTTGGCGATGGACGCGCGATTCTGCTTGGCGAACTTCTCGATCGACGGGGAATCCGCCGCGATGT
CCAGCTCAAGGGGGCCGGGCGCACGCCTTTTTCACGGCGGGGTGATGGGCGGGCAACGCTTGGGCCAGTTTTGCGTGAAT
ATCTGGTCAGCGAGGCCATGGCTGCCTTAGGCATTCCGACGACACGCGCTCTAGCGGCGGTCGTGACAGGCGAAATGGTC
CCGCGCGAGACATTTTTGCCGGGAGCGGTTCTGACCCGGGTCGCATCGAGCCACATTCGGATCGGCACCTTCCAGTTTTT
TGCCGCGCGCGGCGACGTGGAAGGCCTGCGCGCTTTGGCCGATCATGTCATTGCCAGGCACTATCCTGAAGCCGCCGACA
AGGCCTCACCTTATCTGGCCCTCCTGGATGCGGTCATTATGGCGCTCGCGGCCCTTGTCGCACAATGGATGTCGGTCGGC
TTTATCCATGGTGTCATGAATACGGATAATATGTCGGTTGCCGGTGAGACCATCGATTATGGTCCTTGCGCCTTCATGGA
TACCTATGACCCGGAAACGGTGTTCAGTTCGATCGATCATGGCGGGCGCTATGCCTATAACAATCAGGCTCCCATCGCCC
GGTGGAATCTGGCGCGGCTGGCGGAGACCCTGCTACCCCTGATCGCCGATGACCAACAACAAGCCTTGCCGATGGCGCAA
AAATCCATCGGCACATTCGACGCGCATTTCGAGGCCGCCTATCTCGCCGCCATGCGGCGGAAGCTCGGCCTGTTCACGCA
ACAAGAAGAGGATAAGGCGCTCATCAAGACGCTTTTTGCGACGATGGCACGCAATGGCGCTGATTTTACGCTGACCTTCC
GCGCCTTGAGCCAGGCCGCCGCGAGCCAAGACGCGGAAGACAGGCTCAGGTCCTTGTTCAAGGATCCGGCGGATTGCGAT
GCCTGGATTGCCGGGTGGCGGCAAAGGCTCGCGCAAGAACCGCAAGATCCCATGGAACGACAGCAAGCGATGCGGAGGGT
CAATCCCGCCTATATTCCCCGCAACCATAGGGTCGAGGCCGTCATTGCTGCAGCGATCGGGCAGAACGATTTCTCTCCCT
TCGAGAAACTTCTCTCCATCGTGACCGATCCCTATTCGGACCAGCCGGATTTTTCGCATTATATGGAGCCGCCAGCCGCG
CATGAGCGCGTTTTGCAGACCTTTTGCGGGACATGA

Upstream 100 bases:

>100_bases
GCAGGATTTGAAGAGACGAGAGCATGCTAACGGTGCTCGAGGCCGAGGATCGTGGCGCTCCGTTCCTGAACAAGCCGAAG
CTTGAGAAATCTGGCCCCAA

Downstream 100 bases:

>100_bases
GCGGCGAGCTAAATTATGGCTGTGGTTCGGGCGCATCGCAGGATGGCGTAAAAGAGTGCAAAGGATGCGCGCTCATGGCT
TTGAGATTACTCAAAAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 491; Mature: 490

Protein sequence:

>491_residues
MTRFAFEHTYGRLPDRFFARVSPTPVASPRLIRLNEALATDLQLDAASLLSPEGAEIFAGNRIPDEAEPIAIAYAGHQFG
QFVPQLGDGRAILLGELLDRRGIRRDVQLKGAGRTPFSRRGDGRATLGPVLREYLVSEAMAALGIPTTRALAAVVTGEMV
PRETFLPGAVLTRVASSHIRIGTFQFFAARGDVEGLRALADHVIARHYPEAADKASPYLALLDAVIMALAALVAQWMSVG
FIHGVMNTDNMSVAGETIDYGPCAFMDTYDPETVFSSIDHGGRYAYNNQAPIARWNLARLAETLLPLIADDQQQALPMAQ
KSIGTFDAHFEAAYLAAMRRKLGLFTQQEEDKALIKTLFATMARNGADFTLTFRALSQAAASQDAEDRLRSLFKDPADCD
AWIAGWRQRLAQEPQDPMERQQAMRRVNPAYIPRNHRVEAVIAAAIGQNDFSPFEKLLSIVTDPYSDQPDFSHYMEPPAA
HERVLQTFCGT

Sequences:

>Translated_491_residues
MTRFAFEHTYGRLPDRFFARVSPTPVASPRLIRLNEALATDLQLDAASLLSPEGAEIFAGNRIPDEAEPIAIAYAGHQFG
QFVPQLGDGRAILLGELLDRRGIRRDVQLKGAGRTPFSRRGDGRATLGPVLREYLVSEAMAALGIPTTRALAAVVTGEMV
PRETFLPGAVLTRVASSHIRIGTFQFFAARGDVEGLRALADHVIARHYPEAADKASPYLALLDAVIMALAALVAQWMSVG
FIHGVMNTDNMSVAGETIDYGPCAFMDTYDPETVFSSIDHGGRYAYNNQAPIARWNLARLAETLLPLIADDQQQALPMAQ
KSIGTFDAHFEAAYLAAMRRKLGLFTQQEEDKALIKTLFATMARNGADFTLTFRALSQAAASQDAEDRLRSLFKDPADCD
AWIAGWRQRLAQEPQDPMERQQAMRRVNPAYIPRNHRVEAVIAAAIGQNDFSPFEKLLSIVTDPYSDQPDFSHYMEPPAA
HERVLQTFCGT
>Mature_490_residues
TRFAFEHTYGRLPDRFFARVSPTPVASPRLIRLNEALATDLQLDAASLLSPEGAEIFAGNRIPDEAEPIAIAYAGHQFGQ
FVPQLGDGRAILLGELLDRRGIRRDVQLKGAGRTPFSRRGDGRATLGPVLREYLVSEAMAALGIPTTRALAAVVTGEMVP
RETFLPGAVLTRVASSHIRIGTFQFFAARGDVEGLRALADHVIARHYPEAADKASPYLALLDAVIMALAALVAQWMSVGF
IHGVMNTDNMSVAGETIDYGPCAFMDTYDPETVFSSIDHGGRYAYNNQAPIARWNLARLAETLLPLIADDQQQALPMAQK
SIGTFDAHFEAAYLAAMRRKLGLFTQQEEDKALIKTLFATMARNGADFTLTFRALSQAAASQDAEDRLRSLFKDPADCDA
WIAGWRQRLAQEPQDPMERQQAMRRVNPAYIPRNHRVEAVIAAAIGQNDFSPFEKLLSIVTDPYSDQPDFSHYMEPPAAH
ERVLQTFCGT

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=391, Percent_Identity=45.2685421994885, Blast_Score=292, Evalue=6e-79,
Organism=Escherichia coli, GI1787999, Length=480, Percent_Identity=44.1666666666667, Blast_Score=363, Evalue=1e-101,
Organism=Saccharomyces cerevisiae, GI6325034, Length=405, Percent_Identity=32.0987654320988, Blast_Score=184, Evalue=2e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 54035; Mature: 53904

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRFAFEHTYGRLPDRFFARVSPTPVASPRLIRLNEALATDLQLDAASLLSPEGAEIFAG
CCCCCCHHHHCCCCHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEEC
NRIPDEAEPIAIAYAGHQFGQFVPQLGDGRAILLGELLDRRGIRRDVQLKGAGRTPFSRR
CCCCCCCCCEEEEECCHHHHHHHHCCCCCCEEHHHHHHHHCCCCCCEEECCCCCCCCCCC
GDGRATLGPVLREYLVSEAMAALGIPTTRALAAVVTGEMVPRETFLPGAVLTRVASSHIR
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHCCEE
IGTFQFFAARGDVEGLRALADHVIARHYPEAADKASPYLALLDAVIMALAALVAQWMSVG
EEHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
FIHGVMNTDNMSVAGETIDYGPCAFMDTYDPETVFSSIDHGGRYAYNNQAPIARWNLARL
HHHHHCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCHHHHHHHH
AETLLPLIADDQQQALPMAQKSIGTFDAHFEAAYLAAMRRKLGLFTQQEEDKALIKTLFA
HHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
TMARNGADFTLTFRALSQAAASQDAEDRLRSLFKDPADCDAWIAGWRQRLAQEPQDPMER
HHHCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHH
QQAMRRVNPAYIPRNHRVEAVIAAAIGQNDFSPFEKLLSIVTDPYSDQPDFSHYMEPPAA
HHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCHH
HERVLQTFCGT
HHHHHHHHHCC
>Mature Secondary Structure 
TRFAFEHTYGRLPDRFFARVSPTPVASPRLIRLNEALATDLQLDAASLLSPEGAEIFAG
CCCCCHHHHCCCCHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEEC
NRIPDEAEPIAIAYAGHQFGQFVPQLGDGRAILLGELLDRRGIRRDVQLKGAGRTPFSRR
CCCCCCCCCEEEEECCHHHHHHHHCCCCCCEEHHHHHHHHCCCCCCEEECCCCCCCCCCC
GDGRATLGPVLREYLVSEAMAALGIPTTRALAAVVTGEMVPRETFLPGAVLTRVASSHIR
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHCCEE
IGTFQFFAARGDVEGLRALADHVIARHYPEAADKASPYLALLDAVIMALAALVAQWMSVG
EEHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
FIHGVMNTDNMSVAGETIDYGPCAFMDTYDPETVFSSIDHGGRYAYNNQAPIARWNLARL
HHHHHCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCHHHHHHHH
AETLLPLIADDQQQALPMAQKSIGTFDAHFEAAYLAAMRRKLGLFTQQEEDKALIKTLFA
HHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
TMARNGADFTLTFRALSQAAASQDAEDRLRSLFKDPADCDAWIAGWRQRLAQEPQDPMER
HHHCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHH
QQAMRRVNPAYIPRNHRVEAVIAAAIGQNDFSPFEKLLSIVTDPYSDQPDFSHYMEPPAA
HHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCHH
HERVLQTFCGT
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA