| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182677827
Identifier: 182677827
GI number: 182677827
Start: 933160
End: 934617
Strand: Direct
Name: 182677827
Synonym: Bind_0834
Alternate gene names: NA
Gene position: 933160-934617 (Clockwise)
Preceding gene: 182677825
Following gene: 182677828
Centisome position: 22.38
GC content: 51.99
Gene sequence:
>1458_bases ATGGCTGAGACGAATTGGCGCTCAAATGACGGTTTTGTACCCAAAGTGATGCCGAGGATTTCCCTTCCCTTCATCGTTTT ACTGGCGCTTTTGACCGGTGCGGAGGTTCATGCTCAGGAAGCCTCCCCGCAAATCGCGGCCTATTCTCCGCAGGACGTCC GGGTTTTATCAAGCAGCCAGGCCGGGACAGCGTCTCAGACCGCGGCTTATGCTCCCCAAGACGCCCGCGCCGGCCCGCTC GAGCGAGATATAAGAACTTTATTATATTACCTCGGTCCGCTCGATCGTCTGCCCTTCAAGCTGGCGATCGATCAGAATGT TTTTTATAACGATAATATTCAGCTCATTCCGAATAATACGGCCACCCCCACCGGGTTCAGTCGTTCCGACTTCTATTCCA CCACGAATCTCAACGGTGCTCTGAAGTTTCCCATAGGGCCGCACACCTTTTTTGTGAACGGCGGCTATGGCCTTGTGCGC TATGCGCGAAATCCGCAGCTGAATTCAGATAATTATCATGTGAATGGCGGTTTGGCCTGGAGCCTTGGAAGCCATTGCAC CGGCGATATCATCGGGGCCCTGGCGTCTTATCAAGCGCCATTCTACCAGCAAGATCTCATCAACCAGATCAATGTCGTTT CGAATTTGTCGGCCACGGCGGGAGCGCGATGCCATGTCGCTGACCGTATTTATGCGGTCGCAGGTGGCGGTTGGCGTCAA TATACGAATAGCTTGAGCCAATTCACAAGCAACAATCGTGATCAAACCTTTGAATCAGTAGGACTTACTTATGAAGGGGG AGCGCTGGATCAGTTTGGTGTCCGCGCGACTTTCATCCACAGAGTCTTCACGGATCGTCCAGCCGTCGTCGATCCGACTC TGTCGCAATCGCTTGATCAGCGTAATTATACTTTCAATTTTCAACGCACGATCACGCCTCGAATCAACGTATCCGGTTCT GCCGGTGTGACTCAGGTGCAGGGCCATCAGGCCGTCTCCACCAGTTCCAATACGTGGCCGATTTATACAGTCAGCCTCTC TTGGAACCTCACTCCAAAAATTTCTCTGGGCTACAATCTGTCTCGCGCGATCATTGCGCCACAGGGTTTATCATCGGATC TGCAATCGGTTAACTCGCAATTGGTGACGATAGGGTATCAGTTTTCGCCTCGCCTCTCGTTCTCTGCTCAACTGGGCCGA ACGGACTTGAGTAACCAGACGCTGAATGGCGGAATCAATACGAATATCGCGTTTCAGAACCAGAGAATTTTGCTGGCCGG TCTACTTGCGACCTACCGGGCCAGCCCTTTGTTGTCTTTCACCGGCTCCTATTATTATAATGACCGCCAAGATCTGATAA CGGGCGTGAGGGCGACAGCCAATGTTTTCATGATAGGATTATCCTACCATGGCAATGGTTATTATGTGAACGGCGGTAGC GGTCCTGTCATCGATTGA
Upstream 100 bases:
>100_bases GAAAACCTCTTCGTCATTTTAACATTAATACTGCGCCTGAATCGAAAATTTCGTGCGATTCTCATCGGTTCATGTTTTGA TGTGTATTGGCTAGGACATG
Downstream 100 bases:
>100_bases TTCATTTTGGTTTAGATGATCTCCGTCTTCGGGATGACTTCGGAAATTCATAAAATGGTTTGACGAGAGGGGCGATGCCG ACGTCGAGCCGGGGTGTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 485; Mature: 484
Protein sequence:
>485_residues MAETNWRSNDGFVPKVMPRISLPFIVLLALLTGAEVHAQEASPQIAAYSPQDVRVLSSSQAGTASQTAAYAPQDARAGPL ERDIRTLLYYLGPLDRLPFKLAIDQNVFYNDNIQLIPNNTATPTGFSRSDFYSTTNLNGALKFPIGPHTFFVNGGYGLVR YARNPQLNSDNYHVNGGLAWSLGSHCTGDIIGALASYQAPFYQQDLINQINVVSNLSATAGARCHVADRIYAVAGGGWRQ YTNSLSQFTSNNRDQTFESVGLTYEGGALDQFGVRATFIHRVFTDRPAVVDPTLSQSLDQRNYTFNFQRTITPRINVSGS AGVTQVQGHQAVSTSSNTWPIYTVSLSWNLTPKISLGYNLSRAIIAPQGLSSDLQSVNSQLVTIGYQFSPRLSFSAQLGR TDLSNQTLNGGINTNIAFQNQRILLAGLLATYRASPLLSFTGSYYYNDRQDLITGVRATANVFMIGLSYHGNGYYVNGGS GPVID
Sequences:
>Translated_485_residues MAETNWRSNDGFVPKVMPRISLPFIVLLALLTGAEVHAQEASPQIAAYSPQDVRVLSSSQAGTASQTAAYAPQDARAGPL ERDIRTLLYYLGPLDRLPFKLAIDQNVFYNDNIQLIPNNTATPTGFSRSDFYSTTNLNGALKFPIGPHTFFVNGGYGLVR YARNPQLNSDNYHVNGGLAWSLGSHCTGDIIGALASYQAPFYQQDLINQINVVSNLSATAGARCHVADRIYAVAGGGWRQ YTNSLSQFTSNNRDQTFESVGLTYEGGALDQFGVRATFIHRVFTDRPAVVDPTLSQSLDQRNYTFNFQRTITPRINVSGS AGVTQVQGHQAVSTSSNTWPIYTVSLSWNLTPKISLGYNLSRAIIAPQGLSSDLQSVNSQLVTIGYQFSPRLSFSAQLGR TDLSNQTLNGGINTNIAFQNQRILLAGLLATYRASPLLSFTGSYYYNDRQDLITGVRATANVFMIGLSYHGNGYYVNGGS GPVID >Mature_484_residues AETNWRSNDGFVPKVMPRISLPFIVLLALLTGAEVHAQEASPQIAAYSPQDVRVLSSSQAGTASQTAAYAPQDARAGPLE RDIRTLLYYLGPLDRLPFKLAIDQNVFYNDNIQLIPNNTATPTGFSRSDFYSTTNLNGALKFPIGPHTFFVNGGYGLVRY ARNPQLNSDNYHVNGGLAWSLGSHCTGDIIGALASYQAPFYQQDLINQINVVSNLSATAGARCHVADRIYAVAGGGWRQY TNSLSQFTSNNRDQTFESVGLTYEGGALDQFGVRATFIHRVFTDRPAVVDPTLSQSLDQRNYTFNFQRTITPRINVSGSA GVTQVQGHQAVSTSSNTWPIYTVSLSWNLTPKISLGYNLSRAIIAPQGLSSDLQSVNSQLVTIGYQFSPRLSFSAQLGRT DLSNQTLNGGINTNIAFQNQRILLAGLLATYRASPLLSFTGSYYYNDRQDLITGVRATANVFMIGLSYHGNGYYVNGGSG PVID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52827; Mature: 52695
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETNWRSNDGFVPKVMPRISLPFIVLLALLTGAEVHAQEASPQIAAYSPQDVRVLSSSQ CCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCEEHHCCCCCEEEECCCCEEEEECCC AGTASQTAAYAPQDARAGPLERDIRTLLYYLGPLDRLPFKLAIDQNVFYNDNIQLIPNNT CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHCCCEEEEECCCEEECCCEEEEECCC ATPTGFSRSDFYSTTNLNGALKFPIGPHTFFVNGGYGLVRYARNPQLNSDNYHVNGGLAW CCCCCCCCCCCEEECCCCCEEECCCCCEEEEEECCCEEEEEECCCCCCCCCEEECCCEEE SLGSHCTGDIIGALASYQAPFYQQDLINQINVVSNLSATAGARCHVADRIYAVAGGGWRQ CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECEEEEEECCCHHH YTNSLSQFTSNNRDQTFESVGLTYEGGALDQFGVRATFIHRVFTDRPAVVDPTLSQSLDQ HHHHHHHHHCCCCCCHHHHCCEEECCCCCCCCCCHHHHHHHHHCCCCCEECCHHHHHHHC RNYTFNFQRTITPRINVSGSAGVTQVQGHQAVSTSSNTWPIYTVSLSWNLTPKISLGYNL CCCEEEEEEEECEEEEECCCCCCEEECCCEEECCCCCCCEEEEEEEEECCCEEEEECCCC SRAIIAPQGLSSDLQSVNSQLVTIGYQFSPRLSFSAQLGRTDLSNQTLNGGINTNIAFQN EEEEECCCCCCHHHHHCCCEEEEEEEEECCCEEEECCCCCCCCCCCEECCCCCCCEEEEC QRILLAGLLATYRASPLLSFTGSYYYNDRQDLITGVRATANVFMIGLSYHGNGYYVNGGS CEEEEHHHHHHHCCCCEEEECCCEEECCHHHHHHHHHCEEEEEEEEEEECCCEEEEECCC GPVID CCCCC >Mature Secondary Structure AETNWRSNDGFVPKVMPRISLPFIVLLALLTGAEVHAQEASPQIAAYSPQDVRVLSSSQ CCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCEEHHCCCCCEEEECCCCEEEEECCC AGTASQTAAYAPQDARAGPLERDIRTLLYYLGPLDRLPFKLAIDQNVFYNDNIQLIPNNT CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHCCCEEEEECCCEEECCCEEEEECCC ATPTGFSRSDFYSTTNLNGALKFPIGPHTFFVNGGYGLVRYARNPQLNSDNYHVNGGLAW CCCCCCCCCCCEEECCCCCEEECCCCCEEEEEECCCEEEEEECCCCCCCCCEEECCCEEE SLGSHCTGDIIGALASYQAPFYQQDLINQINVVSNLSATAGARCHVADRIYAVAGGGWRQ CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECEEEEEECCCHHH YTNSLSQFTSNNRDQTFESVGLTYEGGALDQFGVRATFIHRVFTDRPAVVDPTLSQSLDQ HHHHHHHHHCCCCCCHHHHCCEEECCCCCCCCCCHHHHHHHHHCCCCCEECCHHHHHHHC RNYTFNFQRTITPRINVSGSAGVTQVQGHQAVSTSSNTWPIYTVSLSWNLTPKISLGYNL CCCEEEEEEEECEEEEECCCCCCEEECCCEEECCCCCCCEEEEEEEEECCCEEEEECCCC SRAIIAPQGLSSDLQSVNSQLVTIGYQFSPRLSFSAQLGRTDLSNQTLNGGINTNIAFQN EEEEECCCCCCHHHHHCCCEEEEEEEEECCCEEEECCCCCCCCCCCEECCCCCCCEEEEC QRILLAGLLATYRASPLLSFTGSYYYNDRQDLITGVRATANVFMIGLSYHGNGYYVNGGS CEEEEHHHHHHHCCCCEEEECCCEEECCHHHHHHHHHCEEEEEEEEEEECCCEEEEECCC GPVID CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA