| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is bp26 [H]
Identifier: 182677753
GI number: 182677753
Start: 853023
End: 853799
Strand: Direct
Name: bp26 [H]
Synonym: Bind_0760
Alternate gene names: 182677753
Gene position: 853023-853799 (Clockwise)
Preceding gene: 182677751
Following gene: 182677761
Centisome position: 20.46
GC content: 59.72
Gene sequence:
>777_bases ATGATCGAAAAAAGCGCGTTGAGCCTTTCCTTTGTTCTGACGATTTTCTCATGCCTCACCTTTGGATCGGCAGCAGGTGT TCGGGCGCAGGGGCTTTCGGTTCCCTTGCGGGACTCGGTGCCGGCGATCACCGTCACAGGCCAGGCGAGCACGGAGATTG TCCCCGATACGGCCCTGATTTCGCTCGGTGTGGAAACCGAAATGCCAAGGGCTTCGGATGCGTCCGCGGAAAACGCCCGC TCCGTGCAAACGCTCATCGACACGTTGAGGGGGCAAGGCGTCGAGTCTAAGGATATCAGGACATTACAAGTTAGTCTCGT ACCGGTCTATGAGGACAGCCACGATCCGGCGGGAGAGCTGAAAAAACGTGTCTTGCGAGGCTACAGGGCGCGTAATGAAT TCGTCCTGCGCGTCTCGCCTCTCGCTCTAGCGGGCCAGCTCGCGGGAAGCCTCTTCGACAAGGGGCTCAATGTCATCGAT GGAATTGATTTCCAACTGGCCGACAAGAGCAAGGTTTTGGACAAGTTGCGCGGGGAGGCGGCAAGCGATGCCTTGGCCCA GGCGAAAAGCTTTGCCGCGCCGCTCGGCTTGCAGCCCGGCCGGGTGTTGGTGATTCAGCCGCAAGGGCCAGTCGGCTTTC CCATTCCCATGGTCCGGGCGCAAAAGGCGGTTTTCGCTCAGGCCGATCATCCGCCCGTGCTGCCCGTCGAACCTGGTACG CAGAAAGTGCAGGTGGAAACGCAGGTGACCTTCGAACTCACGCCCGCGAAACCTTGA
Upstream 100 bases:
>100_bases GAATTTTCGCCATCGCTTTGAAAAAGCGAAAATTCAAGAAAGGAACCAAAGGTCGTTCTTCAAGACCTTTGGTATGACTC ACAATGACAGGGTGTGCTCC
Downstream 100 bases:
>100_bases GTAGCTTCTAGAGCATCAAATCAGACAAGGGGGTACCACTTTTTGGATGAATTTGATGCGTTTGGAAGGATTTATGGCGT CGTTCCTAACGAGCGATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MIEKSALSLSFVLTIFSCLTFGSAAGVRAQGLSVPLRDSVPAITVTGQASTEIVPDTALISLGVETEMPRASDASAENAR SVQTLIDTLRGQGVESKDIRTLQVSLVPVYEDSHDPAGELKKRVLRGYRARNEFVLRVSPLALAGQLAGSLFDKGLNVID GIDFQLADKSKVLDKLRGEAASDALAQAKSFAAPLGLQPGRVLVIQPQGPVGFPIPMVRAQKAVFAQADHPPVLPVEPGT QKVQVETQVTFELTPAKP
Sequences:
>Translated_258_residues MIEKSALSLSFVLTIFSCLTFGSAAGVRAQGLSVPLRDSVPAITVTGQASTEIVPDTALISLGVETEMPRASDASAENAR SVQTLIDTLRGQGVESKDIRTLQVSLVPVYEDSHDPAGELKKRVLRGYRARNEFVLRVSPLALAGQLAGSLFDKGLNVID GIDFQLADKSKVLDKLRGEAASDALAQAKSFAAPLGLQPGRVLVIQPQGPVGFPIPMVRAQKAVFAQADHPPVLPVEPGT QKVQVETQVTFELTPAKP >Mature_258_residues MIEKSALSLSFVLTIFSCLTFGSAAGVRAQGLSVPLRDSVPAITVTGQASTEIVPDTALISLGVETEMPRASDASAENAR SVQTLIDTLRGQGVESKDIRTLQVSLVPVYEDSHDPAGELKKRVLRGYRARNEFVLRVSPLALAGQLAGSLFDKGLNVID GIDFQLADKSKVLDKLRGEAASDALAQAKSFAAPLGLQPGRVLVIQPQGPVGFPIPMVRAQKAVFAQADHPPVLPVEPGT QKVQVETQVTFELTPAKP
Specific function: Unknown
COG id: COG2968
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007497 [H]
Pfam domain/function: PF04402 DUF541 [H]
EC number: NA
Molecular weight: Translated: 27345; Mature: 27345
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEKSALSLSFVLTIFSCLTFGSAAGVRAQGLSVPLRDSVPAITVTGQASTEIVPDTALI CCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCEEEEECCCCCCCCCCCEEE SLGVETEMPRASDASAENARSVQTLIDTLRGQGVESKDIRTLQVSLVPVYEDSHDPAGEL EECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCHHHH KKRVLRGYRARNEFVLRVSPLALAGQLAGSLFDKGLNVIDGIDFQLADKSKVLDKLRGEA HHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCHHHCCCCEEECCHHHHHHHHCCCH ASDALAQAKSFAAPLGLQPGRVLVIQPQGPVGFPIPMVRAQKAVFAQADHPPVLPVEPGT HHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCCC QKVQVETQVTFELTPAKP CEEEEEEEEEEEECCCCC >Mature Secondary Structure MIEKSALSLSFVLTIFSCLTFGSAAGVRAQGLSVPLRDSVPAITVTGQASTEIVPDTALI CCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCEEEEECCCCCCCCCCCEEE SLGVETEMPRASDASAENARSVQTLIDTLRGQGVESKDIRTLQVSLVPVYEDSHDPAGEL EECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCHHHH KKRVLRGYRARNEFVLRVSPLALAGQLAGSLFDKGLNVIDGIDFQLADKSKVLDKLRGEA HHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCHHHCCCCEEECCHHHHHHHHCCCH ASDALAQAKSFAAPLGLQPGRVLVIQPQGPVGFPIPMVRAQKAVFAQADHPPVLPVEPGT HHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCCC QKVQVETQVTFELTPAKP CEEEEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8748294 [H]