| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182677750
Identifier: 182677750
GI number: 182677750
Start: 850406
End: 851038
Strand: Direct
Name: 182677750
Synonym: Bind_0757
Alternate gene names: NA
Gene position: 850406-851038 (Clockwise)
Preceding gene: 182677746
Following gene: 182677751
Centisome position: 20.39
GC content: 56.87
Gene sequence:
>633_bases ATGAAAAATGCCCCGTCGACAGCGTCTATCTCACCGTCCGAGAAACGTAGCGTTTTCCAAAGGCTTTACGATTGGACCTT GAGTCTTGCGGAGAGCCGTCACGCGCCCTTGGCCCTTGGCCTCGTCGCTTTCGCGGAGAGTTCCTTCTTTCCGATTCCGC CCGATGCCCTTCTGGTGCCGATGTCGGTCGCCAAGCCCAAACGCGCTTGGGTCTTCGCGCTGATCTGCACCATTGGATCG GTGCTCGGCGCGCTTCTTGGCTATGCGATCGGCGCCTTTCTCTATGAGACCGTCGGCAAATGGCTCATCAATCTCTATGG CTATGGGGCGCGGGTCGACGAATTGCGCGCGCTTTACGCGCAATGGGGCTGGGCCGTCATTCTCATCAAGGGCCTCACGC CCATTCCCTTCAAGATCGTCACCATTACCAGCGGTCTTTTGGCCTATAATATTCCGGTCTTCGTCGCCTTGTGCCTGCTC ACGCGCGGAGCACGCTTTTTCATTCTGGCCCTGCTTCTGAATTTCTATGGTGAACCGATCAAGCGGCTGCTCGATCAATA TTTTGGCCTCTTCTTGATTTTGCTCCTCGTAACCGTGGTCGGCGGTTTCTGGATCGCCACGCGCGTCCTGTGA
Upstream 100 bases:
>100_bases TGGCCTGGCACCGCTCCTGCGCGGCTTCGCCGCCCGTGCAAAAAAAATCGAGTCCAAGCCGTGGGGGCTGGACGTGTAGG TTCGAGGATTTGAGTCCAGC
Downstream 100 bases:
>100_bases TGAGCTTGGCCCTTTTGTCTCGTCCCAAAGTGCCTCTGCTGCTCGCCATTGTTCTGCTGGCGAGCGGCGCCATTATCGGC GCGTGGATTTTTCAGGCCTT
Product: DedA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MKNAPSTASISPSEKRSVFQRLYDWTLSLAESRHAPLALGLVAFAESSFFPIPPDALLVPMSVAKPKRAWVFALICTIGS VLGALLGYAIGAFLYETVGKWLINLYGYGARVDELRALYAQWGWAVILIKGLTPIPFKIVTITSGLLAYNIPVFVALCLL TRGARFFILALLLNFYGEPIKRLLDQYFGLFLILLLVTVVGGFWIATRVL
Sequences:
>Translated_210_residues MKNAPSTASISPSEKRSVFQRLYDWTLSLAESRHAPLALGLVAFAESSFFPIPPDALLVPMSVAKPKRAWVFALICTIGS VLGALLGYAIGAFLYETVGKWLINLYGYGARVDELRALYAQWGWAVILIKGLTPIPFKIVTITSGLLAYNIPVFVALCLL TRGARFFILALLLNFYGEPIKRLLDQYFGLFLILLLVTVVGGFWIATRVL >Mature_210_residues MKNAPSTASISPSEKRSVFQRLYDWTLSLAESRHAPLALGLVAFAESSFFPIPPDALLVPMSVAKPKRAWVFALICTIGS VLGALLGYAIGAFLYETVGKWLINLYGYGARVDELRALYAQWGWAVILIKGLTPIPFKIVTITSGLLAYNIPVFVALCLL TRGARFFILALLLNFYGEPIKRLLDQYFGLFLILLLVTVVGGFWIATRVL
Specific function: Unknown
COG id: COG1238
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015414 [H]
Pfam domain/function: PF09335 SNARE_assoc [H]
EC number: NA
Molecular weight: Translated: 23173; Mature: 23173
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNAPSTASISPSEKRSVFQRLYDWTLSLAESRHAPLALGLVAFAESSFFPIPPDALLVP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEC MSVAKPKRAWVFALICTIGSVLGALLGYAIGAFLYETVGKWLINLYGYGARVDELRALYA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH QWGWAVILIKGLTPIPFKIVTITSGLLAYNIPVFVALCLLTRGARFFILALLLNFYGEPI HHHHHHHHEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHH KRLLDQYFGLFLILLLVTVVGGFWIATRVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKNAPSTASISPSEKRSVFQRLYDWTLSLAESRHAPLALGLVAFAESSFFPIPPDALLVP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEC MSVAKPKRAWVFALICTIGSVLGALLGYAIGAFLYETVGKWLINLYGYGARVDELRALYA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH QWGWAVILIKGLTPIPFKIVTITSGLLAYNIPVFVALCLLTRGARFFILALLLNFYGEPI HHHHHHHHEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHH KRLLDQYFGLFLILLLVTVVGGFWIATRVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8478068 [H]