| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
Click here to switch to the map view.
The map label for this gene is 182677724
Identifier: 182677724
GI number: 182677724
Start: 820948
End: 821589
Strand: Direct
Name: 182677724
Synonym: Bind_0731
Alternate gene names: NA
Gene position: 820948-821589 (Clockwise)
Preceding gene: 182677711
Following gene: 182677725
Centisome position: 19.69
GC content: 61.37
Gene sequence:
>642_bases ATGGCTGAATGGACGGATGGTGAAATGTGGGGGCACCCACGCTTTGCTGGAGCCTTTGCGAGGCCGGCGCGATTCTTTGA GGTCACAAGCTCATGGGCGATGAACTCAAGGGCGGTCAATTCGCGGCCGCAGCGGATCTGGCGCCACCTGGCCAGCTTCG GCTTCCTTGCCGTCGCGGCGCAAGCTTTCCTTGGGGGGCAGCCGGCCCTGGCGCAAGGTGTCGTCAAGGCAAAGCATGGC GATTGGGAATTGCGGTGCGAGACCCCGCCTGGGGCGCAGAGTGAGCAATGCGCCCTGTTGCAGAGCGTTGCGGCGGAAGA CAAGCCGAACATCAATCTCGTCGTCATCGTCCTGAAGACAGCGGATGGCAAGAGCCGCCTGTTGCGGGTCATTGCGCCGC TCGGTGTCCTTTTGCCGTCTGGTCTCGGCCTCAAGATCGATGCGACCGATGTCGGGCGCGCTGGTTTCGTGCGCTGCCTA CCCACCGGCTGCGTCGCCGAAGTGGTGATGGATGAAAAGCTGATCGACCAGATGAAGACGGGCAAGAATGCGACCTTCAT CATCTTTCAGACCCCGGAAGAAGGGATCGGCATCCCGCTCGCCCTCAATGGGTTCAAACAGGGGTTTGAAAGCCTGCCAT GA
Upstream 100 bases:
>100_bases TTATGAACTCAATGACATGGTCGCGCGGTGGCCGATCCTGTCGGAACTCTGACTAAAGTCCGATAGCCGATAGGCTCGGT CGGTGTCCTTGGGAGCAAGC
Downstream 100 bases:
>100_bases CGTTTCAATCTTCAATTCCTAGTATCCACCTCATTGAAGCGCGACGTGTCGCGCTTCAATGAGGACAAGTGGATACGGTT TAAAAAGCGACGATTCTCGA
Product: invasion associated locus B family protein
Products: NA
Alternate protein names: Invasion Associated Locus B; Invasion Associated Locus B Protein; Invasion Protein B
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MAEWTDGEMWGHPRFAGAFARPARFFEVTSSWAMNSRAVNSRPQRIWRHLASFGFLAVAAQAFLGGQPALAQGVVKAKHG DWELRCETPPGAQSEQCALLQSVAAEDKPNINLVVIVLKTADGKSRLLRVIAPLGVLLPSGLGLKIDATDVGRAGFVRCL PTGCVAEVVMDEKLIDQMKTGKNATFIIFQTPEEGIGIPLALNGFKQGFESLP
Sequences:
>Translated_213_residues MAEWTDGEMWGHPRFAGAFARPARFFEVTSSWAMNSRAVNSRPQRIWRHLASFGFLAVAAQAFLGGQPALAQGVVKAKHG DWELRCETPPGAQSEQCALLQSVAAEDKPNINLVVIVLKTADGKSRLLRVIAPLGVLLPSGLGLKIDATDVGRAGFVRCL PTGCVAEVVMDEKLIDQMKTGKNATFIIFQTPEEGIGIPLALNGFKQGFESLP >Mature_212_residues AEWTDGEMWGHPRFAGAFARPARFFEVTSSWAMNSRAVNSRPQRIWRHLASFGFLAVAAQAFLGGQPALAQGVVKAKHGD WELRCETPPGAQSEQCALLQSVAAEDKPNINLVVIVLKTADGKSRLLRVIAPLGVLLPSGLGLKIDATDVGRAGFVRCLP TGCVAEVVMDEKLIDQMKTGKNATFIIFQTPEEGIGIPLALNGFKQGFESLP
Specific function: Unknown
COG id: COG5342
COG function: function code R; Invasion protein B, involved in pathogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22971; Mature: 22840
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEWTDGEMWGHPRFAGAFARPARFFEVTSSWAMNSRAVNSRPQRIWRHLASFGFLAVAA CCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH QAFLGGQPALAQGVVKAKHGDWELRCETPPGAQSEQCALLQSVAAEDKPNINLVVIVLKT HHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEC ADGKSRLLRVIAPLGVLLPSGLGLKIDATDVGRAGFVRCLPTGCVAEVVMDEKLIDQMKT CCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHC GKNATFIIFQTPEEGIGIPLALNGFKQGFESLP CCCCEEEEEECCCCCCCCEEEECHHHHHHHCCC >Mature Secondary Structure AEWTDGEMWGHPRFAGAFARPARFFEVTSSWAMNSRAVNSRPQRIWRHLASFGFLAVAA CCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH QAFLGGQPALAQGVVKAKHGDWELRCETPPGAQSEQCALLQSVAAEDKPNINLVVIVLKT HHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEC ADGKSRLLRVIAPLGVLLPSGLGLKIDATDVGRAGFVRCLPTGCVAEVVMDEKLIDQMKT CCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHC GKNATFIIFQTPEEGIGIPLALNGFKQGFESLP CCCCEEEEEECCCCCCCCEEEECHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA