| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is yqgE [C]
Identifier: 182677711
GI number: 182677711
Start: 805456
End: 806073
Strand: Direct
Name: yqgE [C]
Synonym: Bind_0718
Alternate gene names: 182677711
Gene position: 805456-806073 (Clockwise)
Preceding gene: 182677707
Following gene: 182677724
Centisome position: 19.31
GC content: 58.25
Gene sequence:
>618_bases ATGATATCGATGATGTCTTTGGACTCGACACAATCGACTGGCGCGTTCCTGGACGGTCAGTTGCTGATCGCCATGCCCAA TATGGTGGATAATCGTTTCGCTCGATCGGTCATTTATCTCTGTGCCCATTCCGAGGAAGGGGCCATGGGCATCGTCCTCA ACCGCGCGGCGCGCAAGATCAATTTCCCGCAGCTTCTCGTCCAGCTGGAGGTTATCGGCGCCGATGAGGCGATCCGCTTG CCGAACAGCGCCGAAACGATGCAGGTCCTAAATGGTGGTCCCGTTGAAACGGGGCGCGGTTTCGTCCTGCACAGCGACGA TTTCTTCATCGATAATTCGACCTTGCCGATCGATGGCGGCGTGTCGCTCACCGCGACGATCGATATTCTCCGGGCCATCG CCAAGGGGTCGGGGCCGCATCAGGCCATTCTCGCGCTCGGCTATGCCGGCTGGTCTGCTGGACAATTGGAAGAAGAAATC CAGCACAATGGCTGGCTGAATTGTCCCGCTGATCCGTCCCTGATCTTCGATGATGCGCTCGGCTCCAAATATGAGCGCGC TCTGCGCAAGGTCGGCATCGATCCCGGCTATCTCTCCAGCGAAGCCGGCCACGCATAA
Upstream 100 bases:
>100_bases CTTTGACAGGCTTTTTCCCTTGGTTCGCCGAATTTATTTGGCACGATCGAGTGGTGCAACCTGGGCTGCGACTTTCTCTT CCTCGGGGAGGTACGTTAGG
Downstream 100 bases:
>100_bases ATCCTGATGGTTTCAGGCAAATCAAAAGGCCCTTCCCGCTGCCTGCGGAAAGGGCCTTTCTTTTTTAAGCTGCTATCGTC GTGGCACCGACCAGCTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MISMMSLDSTQSTGAFLDGQLLIAMPNMVDNRFARSVIYLCAHSEEGAMGIVLNRAARKINFPQLLVQLEVIGADEAIRL PNSAETMQVLNGGPVETGRGFVLHSDDFFIDNSTLPIDGGVSLTATIDILRAIAKGSGPHQAILALGYAGWSAGQLEEEI QHNGWLNCPADPSLIFDDALGSKYERALRKVGIDPGYLSSEAGHA
Sequences:
>Translated_205_residues MISMMSLDSTQSTGAFLDGQLLIAMPNMVDNRFARSVIYLCAHSEEGAMGIVLNRAARKINFPQLLVQLEVIGADEAIRL PNSAETMQVLNGGPVETGRGFVLHSDDFFIDNSTLPIDGGVSLTATIDILRAIAKGSGPHQAILALGYAGWSAGQLEEEI QHNGWLNCPADPSLIFDDALGSKYERALRKVGIDPGYLSSEAGHA >Mature_205_residues MISMMSLDSTQSTGAFLDGQLLIAMPNMVDNRFARSVIYLCAHSEEGAMGIVLNRAARKINFPQLLVQLEVIGADEAIRL PNSAETMQVLNGGPVETGRGFVLHSDDFFIDNSTLPIDGGVSLTATIDILRAIAKGSGPHQAILALGYAGWSAGQLEEEI QHNGWLNCPADPSLIFDDALGSKYERALRKVGIDPGYLSSEAGHA
Specific function: Unknown
COG id: COG1678
COG function: function code K; Putative transcriptional regulator
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0301 (AlgH) family
Homologues:
Organism=Escherichia coli, GI87082187, Length=193, Percent_Identity=35.7512953367876, Blast_Score=128, Evalue=3e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y718_BEII9 (B2IGI6)
Other databases:
- EMBL: CP001016 - RefSeq: YP_001831857.1 - ProteinModelPortal: B2IGI6 - GeneID: 6199954 - GenomeReviews: CP001016_GR - KEGG: bid:Bind_0718 - HOGENOM: HBG530212 - OMA: LIAMPGM - ProtClustDB: CLSK2405281 - HAMAP: MF_00758 - InterPro: IPR003774
Pfam domain/function: PF02622 DUF179
EC number: NA
Molecular weight: Translated: 21912; Mature: 21912
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISMMSLDSTQSTGAFLDGQLLIAMPNMVDNRFARSVIYLCAHSEEGAMGIVLNRAARKI CCEEECCCCCCCCCCEECCEEEEECCCHHHHHHHHHHEEEEECCCCCCEEEEEEHHHHHC NFPQLLVQLEVIGADEAIRLPNSAETMQVLNGGPVETGRGFVLHSDDFFIDNSTLPIDGG CCHHEEEEEEEECCCCEEECCCCHHHHHHHCCCCCCCCCEEEEECCCEEECCCCCCCCCC VSLTATIDILRAIAKGSGPHQAILALGYAGWSAGQLEEEIQHNGWLNCPADPSLIFDDAL CCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEEHHHC GSKYERALRKVGIDPGYLSSEAGHA CHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MISMMSLDSTQSTGAFLDGQLLIAMPNMVDNRFARSVIYLCAHSEEGAMGIVLNRAARKI CCEEECCCCCCCCCCEECCEEEEECCCHHHHHHHHHHEEEEECCCCCCEEEEEEHHHHHC NFPQLLVQLEVIGADEAIRLPNSAETMQVLNGGPVETGRGFVLHSDDFFIDNSTLPIDGG CCHHEEEEEEEECCCCEEECCCCHHHHHHHCCCCCCCCCEEEEECCCEEECCCCCCCCCC VSLTATIDILRAIAKGSGPHQAILALGYAGWSAGQLEEEIQHNGWLNCPADPSLIFDDAL CCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEEHHHC GSKYERALRKVGIDPGYLSSEAGHA CHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA