| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is tatB [H]
Identifier: 182682188
GI number: 182682188
Start: 1844607
End: 1845023
Strand: Direct
Name: tatB [H]
Synonym: XfasM23_1667
Alternate gene names: 182682188
Gene position: 1844607-1845023 (Clockwise)
Preceding gene: 182682187
Following gene: 182682189
Centisome position: 72.75
GC content: 52.04
Gene sequence:
>417_bases TTGTTCGATATCGGTTTTAGCGAACTACTTCTGATCGCTGTAGTCGCCCTGGTTGTTTTAGGTCCAGAACGCTTACCCAA GGCAGCCCGCTTTGCTGGTTTGTTGGTTCGCCGCGCACGCACACAGTGGGAATCCATCAAACAAGAATTGGAACGGGAGT TAGAAGCCGAAGCACTGAAGCGCAACCTGCAAAATGCACAGCAGGTGATACACGACGCCCAAGCGCAGTTACAAAGCAAC CAACAAGATATGGATATCCAGAACTCCATATCCATACTGCACGAGCAGACAAAACGCGACATTCACCCCGATCACGACAC CAACACATTGGAACCGAGCACCGCCGTCCATCACGTCCATGTGCCCCCCCCAAGTACAAGCACCCATGGCAACAATGGCC AGGAAAAATCGCAGTGA
Upstream 100 bases:
>100_bases AAGACGACAAACCGACCGATCAGCTTGGCAGCACTTCCCAGAGCACCGCTTCCGGACCCCAACAGGATCATGGTAAGCAC TGAGACGCGGGCTATTTACC
Downstream 100 bases:
>100_bases CCTCATCGGACAATTTAGAGAGCGAAAGTAGCCTGATTGAGCACTTGATAGAACTACGTGCACGCCTGATACGGATGTTG ATCGGTCTTGGCTTGGTGGT
Product: twin-arginine translocation protein subunit TatB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MFDIGFSELLLIAVVALVVLGPERLPKAARFAGLLVRRARTQWESIKQELERELEAEALKRNLQNAQQVIHDAQAQLQSN QQDMDIQNSISILHEQTKRDIHPDHDTNTLEPSTAVHHVHVPPPSTSTHGNNGQEKSQ
Sequences:
>Translated_138_residues MFDIGFSELLLIAVVALVVLGPERLPKAARFAGLLVRRARTQWESIKQELERELEAEALKRNLQNAQQVIHDAQAQLQSN QQDMDIQNSISILHEQTKRDIHPDHDTNTLEPSTAVHHVHVPPPSTSTHGNNGQEKSQ >Mature_138_residues MFDIGFSELLLIAVVALVVLGPERLPKAARFAGLLVRRARTQWESIKQELERELEAEALKRNLQNAQQVIHDAQAQLQSN QQDMDIQNSISILHEQTKRDIHPDHDTNTLEPSTAVHHVHVPPPSTSTHGNNGQEKSQ
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatB family [H]
Homologues:
Organism=Escherichia coli, GI48994984, Length=68, Percent_Identity=41.1764705882353, Blast_Score=63, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003369 - InterPro: IPR018448 - InterPro: IPR003998 [H]
Pfam domain/function: PF02416 MttA_Hcf106 [H]
EC number: NA
Molecular weight: Translated: 15519; Mature: 15519
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDIGFSELLLIAVVALVVLGPERLPKAARFAGLLVRRARTQWESIKQELERELEAEALK CCCCCHHHHHHHHHHHHHHHCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNLQNAQQVIHDAQAQLQSNQQDMDIQNSISILHEQTKRDIHPDHDTNTLEPSTAVHHVH HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEE VPPPSTSTHGNNGQEKSQ CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFDIGFSELLLIAVVALVVLGPERLPKAARFAGLLVRRARTQWESIKQELERELEAEALK CCCCCHHHHHHHHHHHHHHHCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNLQNAQQVIHDAQAQLQSNQQDMDIQNSISILHEQTKRDIHPDHDTNTLEPSTAVHHVH HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEE VPPPSTSTHGNNGQEKSQ CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]