| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is tatA
Identifier: 182682187
GI number: 182682187
Start: 1844374
End: 1844589
Strand: Direct
Name: tatA
Synonym: XfasM23_1666
Alternate gene names: 182682187
Gene position: 1844374-1844589 (Clockwise)
Preceding gene: 182682186
Following gene: 182682188
Centisome position: 72.74
GC content: 53.7
Gene sequence:
>216_bases ATGGGCAGCTTCAGCCTCCTACACTGGCTGGTCGTGCTTGTCATCGTCCTGTTGGTGTTCGGCACCAAGCGACTTGCCAA TGGCGCCAAAGATATTGGAAGCGCCATTAAAGAGTTCAAAAAAAGCCTACACGAAGACGACAAACCGACCGATCAGCTTG GCAGCACTTCCCAGAGCACCGCTTCCGGACCCCAACAGGATCATGGTAAGCACTGA
Upstream 100 bases:
>100_bases ACACCGAATCTCTCGATCACCACTAAACGTCCATCCTTACAGATGTCGGTTTGTTCAGGTATGCTGATTCTCCCTTTTCC CAGGCAATAGCGAGCAAATC
Downstream 100 bases:
>100_bases GACGCGGGCTATTTACCTTGTTCGATATCGGTTTTAGCGAACTACTTCTGATCGCTGTAGTCGCCCTGGTTGTTTTAGGT CCAGAACGCTTACCCAAGGC
Product: twin arginine translocase protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MGSFSLLHWLVVLVIVLLVFGTKRLANGAKDIGSAIKEFKKSLHEDDKPTDQLGSTSQSTASGPQQDHGKH
Sequences:
>Translated_71_residues MGSFSLLHWLVVLVIVLLVFGTKRLANGAKDIGSAIKEFKKSLHEDDKPTDQLGSTSQSTASGPQQDHGKH >Mature_70_residues GSFSLLHWLVVLVIVLLVFGTKRLANGAKDIGSAIKEFKKSLHEDDKPTDQLGSTSQSTASGPQQDHGKH
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatA/E family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TATA_XYLF2 (B2I7H3)
Other databases:
- EMBL: CP001011 - RefSeq: YP_001830347.1 - GeneID: 6202804 - GenomeReviews: CP001011_GR - KEGG: xfn:XfasM23_1666 - HOGENOM: HBG751935 - OMA: MTDDDAP - ProtClustDB: PRK04561 - HAMAP: MF_00236 - InterPro: IPR003369 - InterPro: IPR006312 - TIGRFAMs: TIGR01411
Pfam domain/function: PF02416 MttA_Hcf106
EC number: NA
Molecular weight: Translated: 7672; Mature: 7541
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x157157e8)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSFSLLHWLVVLVIVLLVFGTKRLANGAKDIGSAIKEFKKSLHEDDKPTDQLGSTSQST CCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCC ASGPQQDHGKH CCCCCCCCCCH >Mature Secondary Structure GSFSLLHWLVVLVIVLLVFGTKRLANGAKDIGSAIKEFKKSLHEDDKPTDQLGSTSQST CCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCC ASGPQQDHGKH CCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA