| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182682162
Identifier: 182682162
GI number: 182682162
Start: 1820346
End: 1821149
Strand: Direct
Name: 182682162
Synonym: XfasM23_1641
Alternate gene names: NA
Gene position: 1820346-1821149 (Clockwise)
Preceding gene: 182682161
Following gene: 182682163
Centisome position: 71.79
GC content: 52.99
Gene sequence:
>804_bases ATGAAACGTTTCCTCCTATTGAGCACCATACTGGCGGCTCTTCCCTTCACTGCACAAGCACACAAAGCCTGGCTGCTCCC CTCACAGACAGTCATTGCCGGCCAATCACCGTGGATCACCGTTGACGCAGCAATATCAAACGATCTGTTCTATTTCAACC ACGCGCCGCTATCCCTGGACACCCTGATCATCACCGCACCAAACGGTAGCCATGAGCGACCACAGAACCCAACCAGCAGC AAGTACCGTAGCGTATTCGATGTCACACTGAGTCAACAGGGCACCTACCGACTCAGTGTCGTGAACGATGGGCTATCTGT CACCTGGACCGAGAATGGCCAACTCAAACGCTGGCGTGGAGATGCCACACGCTTCGCCGTAGAAGTACCCCAAAACACCC CAGACCTTAACGTCACACAATCCCTTACCAGGATAGAAACCTTTGTCACCAATGGGAATCCGAACCGGACCGCACTCGAA CCCAGCAACCACGGTCTGGAATTAGTCCCCATCACCCATCCAAATGACCTGTTCGCTGGCGAAACAGCACAATTTTCACT ACGCATTGACGGAAAAGAAGCCACTGGACTGGAAGTACACATCATCCGCGGCGCAACTCGGTACCGTAACTCACAGGATG AAATCAAAGTGACCACCGATACCCAAGGACATTTCTCTGTCATTTGGCCCGAAGCCGGGATGTATTTACTGGACATCACC ACCGAAGACACCAAGGTCAGCCTGTCACCCGCAAAGCAGCGTAGGCTTAAATACATGGCCACCCTAGAAGTGCTACCACA GTGA
Upstream 100 bases:
>100_bases GACGGGTCAAGCACTGGGTAAGAGTGAACTCGGCACCGTCACCTTGGCTGCCACCTCGAAACCCAAACCTCATTGAGCCT CTCCTTAACAAGGAACTGAT
Downstream 100 bases:
>100_bases CCCCTTCGCTATGACAGCCCCATCGCTTCTATAACAACCGTCTCATCACCTGCTTGTCACACCCGCATGAACACACCCAA CCTCAACCTTGCCACCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MKRFLLLSTILAALPFTAQAHKAWLLPSQTVIAGQSPWITVDAAISNDLFYFNHAPLSLDTLIITAPNGSHERPQNPTSS KYRSVFDVTLSQQGTYRLSVVNDGLSVTWTENGQLKRWRGDATRFAVEVPQNTPDLNVTQSLTRIETFVTNGNPNRTALE PSNHGLELVPITHPNDLFAGETAQFSLRIDGKEATGLEVHIIRGATRYRNSQDEIKVTTDTQGHFSVIWPEAGMYLLDIT TEDTKVSLSPAKQRRLKYMATLEVLPQ
Sequences:
>Translated_267_residues MKRFLLLSTILAALPFTAQAHKAWLLPSQTVIAGQSPWITVDAAISNDLFYFNHAPLSLDTLIITAPNGSHERPQNPTSS KYRSVFDVTLSQQGTYRLSVVNDGLSVTWTENGQLKRWRGDATRFAVEVPQNTPDLNVTQSLTRIETFVTNGNPNRTALE PSNHGLELVPITHPNDLFAGETAQFSLRIDGKEATGLEVHIIRGATRYRNSQDEIKVTTDTQGHFSVIWPEAGMYLLDIT TEDTKVSLSPAKQRRLKYMATLEVLPQ >Mature_267_residues MKRFLLLSTILAALPFTAQAHKAWLLPSQTVIAGQSPWITVDAAISNDLFYFNHAPLSLDTLIITAPNGSHERPQNPTSS KYRSVFDVTLSQQGTYRLSVVNDGLSVTWTENGQLKRWRGDATRFAVEVPQNTPDLNVTQSLTRIETFVTNGNPNRTALE PSNHGLELVPITHPNDLFAGETAQFSLRIDGKEATGLEVHIIRGATRYRNSQDEIKVTTDTQGHFSVIWPEAGMYLLDIT TEDTKVSLSPAKQRRLKYMATLEVLPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29728; Mature: 29728
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFLLLSTILAALPFTAQAHKAWLLPSQTVIAGQSPWITVDAAISNDLFYFNHAPLSLD CCHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCCCEEEEEEECCCEEEEECCCCEEE TLIITAPNGSHERPQNPTSSKYRSVFDVTLSQQGTYRLSVVNDGLSVTWTENGQLKRWRG EEEEECCCCCCCCCCCCCCHHHEEEEEEEECCCCEEEEEEEECCEEEEECCCCCEEEECC DATRFAVEVPQNTPDLNVTQSLTRIETFVTNGNPNRTALEPSNHGLELVPITHPNDLFAG CCEEEEEECCCCCCCCCHHHHHHEEEEEEECCCCCCEEECCCCCCEEEEEECCCCCCCCC ETAQFSLRIDGKEATGLEVHIIRGATRYRNSQDEIKVTTDTQGHFSVIWPEAGMYLLDIT CCEEEEEEECCCCCCCEEEEEEECHHHHCCCCCCEEEEECCCCCEEEEECCCCEEEEEEE TEDTKVSLSPAKQRRLKYMATLEVLPQ CCCCEEEECHHHHHHHEEEEEEEECCC >Mature Secondary Structure MKRFLLLSTILAALPFTAQAHKAWLLPSQTVIAGQSPWITVDAAISNDLFYFNHAPLSLD CCHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCCCEEEEEEECCCEEEEECCCCEEE TLIITAPNGSHERPQNPTSSKYRSVFDVTLSQQGTYRLSVVNDGLSVTWTENGQLKRWRG EEEEECCCCCCCCCCCCCCHHHEEEEEEEECCCCEEEEEEEECCEEEEECCCCCEEEECC DATRFAVEVPQNTPDLNVTQSLTRIETFVTNGNPNRTALEPSNHGLELVPITHPNDLFAG CCEEEEEECCCCCCCCCHHHHHHEEEEEEECCCCCCEEECCCCCCEEEEEECCCCCCCCC ETAQFSLRIDGKEATGLEVHIIRGATRYRNSQDEIKVTTDTQGHFSVIWPEAGMYLLDIT CCEEEEEEECCCCCCCEEEEEEECHHHHCCCCCCEEEEECCCCCEEEEECCCCEEEEEEE TEDTKVSLSPAKQRRLKYMATLEVLPQ CCCCEEEECHHHHHHHEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA