| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681577
Identifier: 182681577
GI number: 182681577
Start: 1185489
End: 1185971
Strand: Reverse
Name: 182681577
Synonym: XfasM23_1035
Alternate gene names: NA
Gene position: 1185971-1185489 (Counterclockwise)
Preceding gene: 182681578
Following gene: 182681576
Centisome position: 46.77
GC content: 60.87
Gene sequence:
>483_bases ATGTCCGGAATTGACTTATCCACCTATGGTGGGCGCTTACTTGATCTTGGCGTTGCGGGGCAAGTGATCGACTTGAACAC CAGCGGCCTGTGCAACTACAAAAACGCCGGAGAAACCCCGATTGATTTTGGCTTATTTGTGGCACGCGGCCCCAAAGACG CCACCTGCAAAGCCCCCGATGGGGCAGATGCCGCCATCCTGGGGATCAGTGTCCGCCATGTCACGATGGTGGCTGATGCG GCCGGACAGGTCCGCTATGCCCCCCATGCGATGGTGCCGGTGTTGGAGATCGGTCGCATCTGGGTGATCTGCGAGGATGG CTGCCGCCCGGATGATCCGGTGTTTATCCGCATTGCGGGAACGGGGGCCTGGGGCGCGGCCCGATCTGCCGCCATCGCTT CAGACACCATTCCCTACCCCCAGGCCATCTGGGATAGCACGAGCGCCCCCGGAGCGCTGGGCGTAATCCGCATTCTTAAA TAA
Upstream 100 bases:
>100_bases GATCGTCAAGACATCGGATGCCGACCTGGACCCGCGAGCGGCGTATATCCAGCAGCTCACCCACGCCACCTATAGCACTT CAGCACCCTAAGGAACACGC
Downstream 100 bases:
>100_bases GGGACCTGCATGAACATGATTGACATACGCCGCCGTCAGATAGCCGATGCGTTGAACCCGATGTTGCTGACCGATGCACG GTATCAGACCTGTGATGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MSGIDLSTYGGRLLDLGVAGQVIDLNTSGLCNYKNAGETPIDFGLFVARGPKDATCKAPDGADAAILGISVRHVTMVADA AGQVRYAPHAMVPVLEIGRIWVICEDGCRPDDPVFIRIAGTGAWGAARSAAIASDTIPYPQAIWDSTSAPGALGVIRILK
Sequences:
>Translated_160_residues MSGIDLSTYGGRLLDLGVAGQVIDLNTSGLCNYKNAGETPIDFGLFVARGPKDATCKAPDGADAAILGISVRHVTMVADA AGQVRYAPHAMVPVLEIGRIWVICEDGCRPDDPVFIRIAGTGAWGAARSAAIASDTIPYPQAIWDSTSAPGALGVIRILK >Mature_159_residues SGIDLSTYGGRLLDLGVAGQVIDLNTSGLCNYKNAGETPIDFGLFVARGPKDATCKAPDGADAAILGISVRHVTMVADAA GQVRYAPHAMVPVLEIGRIWVICEDGCRPDDPVFIRIAGTGAWGAARSAAIASDTIPYPQAIWDSTSAPGALGVIRILK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16607; Mature: 16476
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGIDLSTYGGRLLDLGVAGQVIDLNTSGLCNYKNAGETPIDFGLFVARGPKDATCKAPD CCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCEECCCC GADAAILGISVRHVTMVADAAGQVRYAPHAMVPVLEIGRIWVICEDGCRPDDPVFIRIAG CCCEEEEEEEEEEEEEEECCCCCEEECCCCCCCEEECCEEEEEECCCCCCCCCEEEEEEC TGAWGAARSAAIASDTIPYPQAIWDSTSAPGALGVIRILK CCCCCCCCCCEECCCCCCCCHHHCCCCCCCCCEEEEEECC >Mature Secondary Structure SGIDLSTYGGRLLDLGVAGQVIDLNTSGLCNYKNAGETPIDFGLFVARGPKDATCKAPD CCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCEECCCC GADAAILGISVRHVTMVADAAGQVRYAPHAMVPVLEIGRIWVICEDGCRPDDPVFIRIAG CCCEEEEEEEEEEEEEEECCCCCEEECCCCCCCEEECCEEEEEECCCCCCCCCEEEEEEC TGAWGAARSAAIASDTIPYPQAIWDSTSAPGALGVIRILK CCCCCCCCCCEECCCCCCCCHHHCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA