Definition Xylella fastidiosa M23 chromosome, complete genome.
Accession NC_010577
Length 2,535,690

Click here to switch to the map view.

The map label for this gene is 182681578

Identifier: 182681578

GI number: 182681578

Start: 1185981

End: 1187189

Strand: Reverse

Name: 182681578

Synonym: XfasM23_1036

Alternate gene names: NA

Gene position: 1187189-1185981 (Counterclockwise)

Preceding gene: 182681579

Following gene: 182681577

Centisome position: 46.82

GC content: 62.45

Gene sequence:

>1209_bases
ATGATCACCCTAGATGTCCAACTGACCCAACGTCGCAAGACGCCGGAAGGGTATCTGATCGTACCTGCCCGATTTGCGCG
CACCGGCATACAGCACTATGCCGCCCACGAACTGGGGGTAAGCGATGCGGATCCCCAGCGGGTGATTCGCGTCTACCGAC
CGCCTGAAGAAGTGTTTGCTGCTGAGGCTATCGCCAGCTTTGATGGTCGCCCGATCACCGATGAGCATCCGGATGAGGAG
GTGACCGCCGAGAACTGGCGCGCCCATGCGGTGGGCTTTGCCCGCAATCCACGGCGCGAAGGGGAGTATCTGGTGGCCGA
TCTCACCATTACCGATGAGGCGACCATCGAAAAGATTGAAGCTGGAAAACAAGAACTCTCCGGCGGCTACAGCGCTGAGT
ACGACTGGACCCCGGGCCTGACGGCTGAGGGAGAACCTTACGACGTCAAACAGATCCGGATCCGTGGCAACCACATTGCC
ACCGTTGCCGCGGGCCGTGCTGGACCCCAGTGCCGCGTGGCCGATCGTGACATTGCCTTACCCCCACCCTTTGGAGAACA
CCCCATGACCAAACGCCGCATTAGTGTTGACGGTATCAGCCTGGAGCTTGAAGAGACCGAGGCCAGCGCGGTTGAACACC
TGGCGGCCAAACTCAAGACGGCCACCGAGAAAGTGGATGCCCTGGAAGAGGATCTGCACGCCGCCCAGGCCCCCATCAAA
CTGGACAGCGGCCAAGCGCTGACCAAGGAACAGCTGGTGGCCAACATAGCGGACCTGTCCAAGCAATTGGCGGCGCTGGA
AGCGGCCCGCGCTGCGGACGAAGACCCGCAACAGCGGGATCAAGCGATTGAAGCCATGTCACGACAGATCGGCGATGCGC
GGCGGCTGGTGCCGGGCCTGGTGACCGACGGCAAGCCGTGCAGCGCAATCCGCCGTGAAGTGGTCAGCCGTCTCCACCCC
ACGTATTCGGCCATGATTGACACCTTACTGCACGGGGTCCGTGTGGCCGATGCCGCGCAGACGGCGGTGGACCTGGCGTT
TAACGTTCTGGCGTCCGCGCCGGTGACGGCTTCGGCAGGGCTGGCTGCTGAGGCGGTGAACGAGGCGTTACGGCGTCAGA
TCGTCAAGACATCGGATGCCGACCTGGACCCGCGAGCGGCGTATATCCAGCAGCTCACCCACGCCACCTATAGCACTTCA
GCACCCTAA

Upstream 100 bases:

>100_bases
CCGTCTTTCGATGGAGCGATCCCCCCGCGACGGGGCATCCGGGACAGGACTACAACTGCCGCTGTGTGGCGATTCCGAAC
GTGACGCTGGAAGGCCCTTG

Downstream 100 bases:

>100_bases
GGAACACGCATGTCCGGAATTGACTTATCCACCTATGGTGGGCGCTTACTTGATCTTGGCGTTGCGGGGCAAGTGATCGA
CTTGAACACCAGCGGCCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MITLDVQLTQRRKTPEGYLIVPARFARTGIQHYAAHELGVSDADPQRVIRVYRPPEEVFAAEAIASFDGRPITDEHPDEE
VTAENWRAHAVGFARNPRREGEYLVADLTITDEATIEKIEAGKQELSGGYSAEYDWTPGLTAEGEPYDVKQIRIRGNHIA
TVAAGRAGPQCRVADRDIALPPPFGEHPMTKRRISVDGISLELEETEASAVEHLAAKLKTATEKVDALEEDLHAAQAPIK
LDSGQALTKEQLVANIADLSKQLAALEAARAADEDPQQRDQAIEAMSRQIGDARRLVPGLVTDGKPCSAIRREVVSRLHP
TYSAMIDTLLHGVRVADAAQTAVDLAFNVLASAPVTASAGLAAEAVNEALRRQIVKTSDADLDPRAAYIQQLTHATYSTS
AP

Sequences:

>Translated_402_residues
MITLDVQLTQRRKTPEGYLIVPARFARTGIQHYAAHELGVSDADPQRVIRVYRPPEEVFAAEAIASFDGRPITDEHPDEE
VTAENWRAHAVGFARNPRREGEYLVADLTITDEATIEKIEAGKQELSGGYSAEYDWTPGLTAEGEPYDVKQIRIRGNHIA
TVAAGRAGPQCRVADRDIALPPPFGEHPMTKRRISVDGISLELEETEASAVEHLAAKLKTATEKVDALEEDLHAAQAPIK
LDSGQALTKEQLVANIADLSKQLAALEAARAADEDPQQRDQAIEAMSRQIGDARRLVPGLVTDGKPCSAIRREVVSRLHP
TYSAMIDTLLHGVRVADAAQTAVDLAFNVLASAPVTASAGLAAEAVNEALRRQIVKTSDADLDPRAAYIQQLTHATYSTS
AP
>Mature_402_residues
MITLDVQLTQRRKTPEGYLIVPARFARTGIQHYAAHELGVSDADPQRVIRVYRPPEEVFAAEAIASFDGRPITDEHPDEE
VTAENWRAHAVGFARNPRREGEYLVADLTITDEATIEKIEAGKQELSGGYSAEYDWTPGLTAEGEPYDVKQIRIRGNHIA
TVAAGRAGPQCRVADRDIALPPPFGEHPMTKRRISVDGISLELEETEASAVEHLAAKLKTATEKVDALEEDLHAAQAPIK
LDSGQALTKEQLVANIADLSKQLAALEAARAADEDPQQRDQAIEAMSRQIGDARRLVPGLVTDGKPCSAIRREVVSRLHP
TYSAMIDTLLHGVRVADAAQTAVDLAFNVLASAPVTASAGLAAEAVNEALRRQIVKTSDADLDPRAAYIQQLTHATYSTS
AP

Specific function: Unknown

COG id: COG3566

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019246
- InterPro:   IPR016913 [H]

Pfam domain/function: PF09979 DUF2213 [H]

EC number: NA

Molecular weight: Translated: 43590; Mature: 43590

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITLDVQLTQRRKTPEGYLIVPARFARTGIQHYAAHELGVSDADPQRVIRVYRPPEEVFA
CEEEEEEHHHCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCHHHHHEECCCHHHHHH
AEAIASFDGRPITDEHPDEEVTAENWRAHAVGFARNPRREGEYLVADLTITDEATIEKIE
HHHHHHCCCCCCCCCCCCCCCCCCCCHHHEECCCCCCCCCCCEEEEEEEECCHHHHHHHH
AGKQELSGGYSAEYDWTPGLTAEGEPYDVKQIRIRGNHIATVAAGRAGPQCRVADRDIAL
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCEECCCCCCC
PPPFGEHPMTKRRISVDGISLELEETEASAVEHLAAKLKTATEKVDALEEDLHAAQAPIK
CCCCCCCCCCCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
LDSGQALTKEQLVANIADLSKQLAALEAARAADEDPQQRDQAIEAMSRQIGDARRLVPGL
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
VTDGKPCSAIRREVVSRLHPTYSAMIDTLLHGVRVADAAQTAVDLAFNVLASAPVTASAG
CCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LAAEAVNEALRRQIVKTSDADLDPRAAYIQQLTHATYSTSAP
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MITLDVQLTQRRKTPEGYLIVPARFARTGIQHYAAHELGVSDADPQRVIRVYRPPEEVFA
CEEEEEEHHHCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCHHHHHEECCCHHHHHH
AEAIASFDGRPITDEHPDEEVTAENWRAHAVGFARNPRREGEYLVADLTITDEATIEKIE
HHHHHHCCCCCCCCCCCCCCCCCCCCHHHEECCCCCCCCCCCEEEEEEEECCHHHHHHHH
AGKQELSGGYSAEYDWTPGLTAEGEPYDVKQIRIRGNHIATVAAGRAGPQCRVADRDIAL
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCEECCCCCCC
PPPFGEHPMTKRRISVDGISLELEETEASAVEHLAAKLKTATEKVDALEEDLHAAQAPIK
CCCCCCCCCCCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
LDSGQALTKEQLVANIADLSKQLAALEAARAADEDPQQRDQAIEAMSRQIGDARRLVPGL
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
VTDGKPCSAIRREVVSRLHPTYSAMIDTLLHGVRVADAAQTAVDLAFNVLASAPVTASAG
CCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LAAEAVNEALRRQIVKTSDADLDPRAAYIQQLTHATYSTSAP
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]