| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681578
Identifier: 182681578
GI number: 182681578
Start: 1185981
End: 1187189
Strand: Reverse
Name: 182681578
Synonym: XfasM23_1036
Alternate gene names: NA
Gene position: 1187189-1185981 (Counterclockwise)
Preceding gene: 182681579
Following gene: 182681577
Centisome position: 46.82
GC content: 62.45
Gene sequence:
>1209_bases ATGATCACCCTAGATGTCCAACTGACCCAACGTCGCAAGACGCCGGAAGGGTATCTGATCGTACCTGCCCGATTTGCGCG CACCGGCATACAGCACTATGCCGCCCACGAACTGGGGGTAAGCGATGCGGATCCCCAGCGGGTGATTCGCGTCTACCGAC CGCCTGAAGAAGTGTTTGCTGCTGAGGCTATCGCCAGCTTTGATGGTCGCCCGATCACCGATGAGCATCCGGATGAGGAG GTGACCGCCGAGAACTGGCGCGCCCATGCGGTGGGCTTTGCCCGCAATCCACGGCGCGAAGGGGAGTATCTGGTGGCCGA TCTCACCATTACCGATGAGGCGACCATCGAAAAGATTGAAGCTGGAAAACAAGAACTCTCCGGCGGCTACAGCGCTGAGT ACGACTGGACCCCGGGCCTGACGGCTGAGGGAGAACCTTACGACGTCAAACAGATCCGGATCCGTGGCAACCACATTGCC ACCGTTGCCGCGGGCCGTGCTGGACCCCAGTGCCGCGTGGCCGATCGTGACATTGCCTTACCCCCACCCTTTGGAGAACA CCCCATGACCAAACGCCGCATTAGTGTTGACGGTATCAGCCTGGAGCTTGAAGAGACCGAGGCCAGCGCGGTTGAACACC TGGCGGCCAAACTCAAGACGGCCACCGAGAAAGTGGATGCCCTGGAAGAGGATCTGCACGCCGCCCAGGCCCCCATCAAA CTGGACAGCGGCCAAGCGCTGACCAAGGAACAGCTGGTGGCCAACATAGCGGACCTGTCCAAGCAATTGGCGGCGCTGGA AGCGGCCCGCGCTGCGGACGAAGACCCGCAACAGCGGGATCAAGCGATTGAAGCCATGTCACGACAGATCGGCGATGCGC GGCGGCTGGTGCCGGGCCTGGTGACCGACGGCAAGCCGTGCAGCGCAATCCGCCGTGAAGTGGTCAGCCGTCTCCACCCC ACGTATTCGGCCATGATTGACACCTTACTGCACGGGGTCCGTGTGGCCGATGCCGCGCAGACGGCGGTGGACCTGGCGTT TAACGTTCTGGCGTCCGCGCCGGTGACGGCTTCGGCAGGGCTGGCTGCTGAGGCGGTGAACGAGGCGTTACGGCGTCAGA TCGTCAAGACATCGGATGCCGACCTGGACCCGCGAGCGGCGTATATCCAGCAGCTCACCCACGCCACCTATAGCACTTCA GCACCCTAA
Upstream 100 bases:
>100_bases CCGTCTTTCGATGGAGCGATCCCCCCGCGACGGGGCATCCGGGACAGGACTACAACTGCCGCTGTGTGGCGATTCCGAAC GTGACGCTGGAAGGCCCTTG
Downstream 100 bases:
>100_bases GGAACACGCATGTCCGGAATTGACTTATCCACCTATGGTGGGCGCTTACTTGATCTTGGCGTTGCGGGGCAAGTGATCGA CTTGAACACCAGCGGCCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MITLDVQLTQRRKTPEGYLIVPARFARTGIQHYAAHELGVSDADPQRVIRVYRPPEEVFAAEAIASFDGRPITDEHPDEE VTAENWRAHAVGFARNPRREGEYLVADLTITDEATIEKIEAGKQELSGGYSAEYDWTPGLTAEGEPYDVKQIRIRGNHIA TVAAGRAGPQCRVADRDIALPPPFGEHPMTKRRISVDGISLELEETEASAVEHLAAKLKTATEKVDALEEDLHAAQAPIK LDSGQALTKEQLVANIADLSKQLAALEAARAADEDPQQRDQAIEAMSRQIGDARRLVPGLVTDGKPCSAIRREVVSRLHP TYSAMIDTLLHGVRVADAAQTAVDLAFNVLASAPVTASAGLAAEAVNEALRRQIVKTSDADLDPRAAYIQQLTHATYSTS AP
Sequences:
>Translated_402_residues MITLDVQLTQRRKTPEGYLIVPARFARTGIQHYAAHELGVSDADPQRVIRVYRPPEEVFAAEAIASFDGRPITDEHPDEE VTAENWRAHAVGFARNPRREGEYLVADLTITDEATIEKIEAGKQELSGGYSAEYDWTPGLTAEGEPYDVKQIRIRGNHIA TVAAGRAGPQCRVADRDIALPPPFGEHPMTKRRISVDGISLELEETEASAVEHLAAKLKTATEKVDALEEDLHAAQAPIK LDSGQALTKEQLVANIADLSKQLAALEAARAADEDPQQRDQAIEAMSRQIGDARRLVPGLVTDGKPCSAIRREVVSRLHP TYSAMIDTLLHGVRVADAAQTAVDLAFNVLASAPVTASAGLAAEAVNEALRRQIVKTSDADLDPRAAYIQQLTHATYSTS AP >Mature_402_residues MITLDVQLTQRRKTPEGYLIVPARFARTGIQHYAAHELGVSDADPQRVIRVYRPPEEVFAAEAIASFDGRPITDEHPDEE VTAENWRAHAVGFARNPRREGEYLVADLTITDEATIEKIEAGKQELSGGYSAEYDWTPGLTAEGEPYDVKQIRIRGNHIA TVAAGRAGPQCRVADRDIALPPPFGEHPMTKRRISVDGISLELEETEASAVEHLAAKLKTATEKVDALEEDLHAAQAPIK LDSGQALTKEQLVANIADLSKQLAALEAARAADEDPQQRDQAIEAMSRQIGDARRLVPGLVTDGKPCSAIRREVVSRLHP TYSAMIDTLLHGVRVADAAQTAVDLAFNVLASAPVTASAGLAAEAVNEALRRQIVKTSDADLDPRAAYIQQLTHATYSTS AP
Specific function: Unknown
COG id: COG3566
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019246 - InterPro: IPR016913 [H]
Pfam domain/function: PF09979 DUF2213 [H]
EC number: NA
Molecular weight: Translated: 43590; Mature: 43590
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLDVQLTQRRKTPEGYLIVPARFARTGIQHYAAHELGVSDADPQRVIRVYRPPEEVFA CEEEEEEHHHCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCHHHHHEECCCHHHHHH AEAIASFDGRPITDEHPDEEVTAENWRAHAVGFARNPRREGEYLVADLTITDEATIEKIE HHHHHHCCCCCCCCCCCCCCCCCCCCHHHEECCCCCCCCCCCEEEEEEEECCHHHHHHHH AGKQELSGGYSAEYDWTPGLTAEGEPYDVKQIRIRGNHIATVAAGRAGPQCRVADRDIAL HHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCEECCCCCCC PPPFGEHPMTKRRISVDGISLELEETEASAVEHLAAKLKTATEKVDALEEDLHAAQAPIK CCCCCCCCCCCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE LDSGQALTKEQLVANIADLSKQLAALEAARAADEDPQQRDQAIEAMSRQIGDARRLVPGL ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC VTDGKPCSAIRREVVSRLHPTYSAMIDTLLHGVRVADAAQTAVDLAFNVLASAPVTASAG CCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LAAEAVNEALRRQIVKTSDADLDPRAAYIQQLTHATYSTSAP HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MITLDVQLTQRRKTPEGYLIVPARFARTGIQHYAAHELGVSDADPQRVIRVYRPPEEVFA CEEEEEEHHHCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCHHHHHEECCCHHHHHH AEAIASFDGRPITDEHPDEEVTAENWRAHAVGFARNPRREGEYLVADLTITDEATIEKIE HHHHHHCCCCCCCCCCCCCCCCCCCCHHHEECCCCCCCCCCCEEEEEEEECCHHHHHHHH AGKQELSGGYSAEYDWTPGLTAEGEPYDVKQIRIRGNHIATVAAGRAGPQCRVADRDIAL HHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCEECCCCCCC PPPFGEHPMTKRRISVDGISLELEETEASAVEHLAAKLKTATEKVDALEEDLHAAQAPIK CCCCCCCCCCCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE LDSGQALTKEQLVANIADLSKQLAALEAARAADEDPQQRDQAIEAMSRQIGDARRLVPGL ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC VTDGKPCSAIRREVVSRLHPTYSAMIDTLLHGVRVADAAQTAVDLAFNVLASAPVTASAG CCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LAAEAVNEALRRQIVKTSDADLDPRAAYIQQLTHATYSTSAP HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]