| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is mod [H]
Identifier: 182681431
GI number: 182681431
Start: 1041961
End: 1043589
Strand: Direct
Name: mod [H]
Synonym: XfasM23_0882
Alternate gene names: 182681431
Gene position: 1041961-1043589 (Clockwise)
Preceding gene: 182681430
Following gene: 182681432
Centisome position: 41.09
GC content: 51.93
Gene sequence:
>1629_bases ATGCCGAGTCAATACGACCATCTGGATCGCGACGCACTGATCCGCTTGCTACAGCGGCGAGACGCCGAACGTCAATTGGG ACTGGTGTGGGAGCGCGACGAGATCGAAGCAGATGCGGCAGTGAACGATGATTACGTAGCCTTGTCATTGGATACCAGCC TGAGCCACGGCGCTGCCCCCTGGCCCAACCTGATTATTGAGGGCGATAACTTTGACGCCTTACGCGCCCTGCGCATGACG CACCGCGGTGCGATCCGCTGTATCTATATCGATCCCCCGTACAACACCGGCAACCGCGACTTTGTCTACAACGACTGTTT CATTGACAAGACGCACCGTTACCGCCATTCACTGTGGCTGGAATTCATCTATCGCCGTTTGCAGCTGGCCAAGGAACTTC TTGCCGATGATGGCGTGATTTTTGTCAGTATTGATGACAACGAATTATTCCGCTTGGGGATGTTGATGGACCGGGTGTTT GGACATGATCATTTCATCGCCAATGTAATTTGGCAGAAGATTTTTTCTCCAAAGAATACAGCTCAACATTTTTCTGATGA TCACGAATACATCCTCGTTTTTGCAAGAAACCGTACTTTATGGAGATCGAATCCATTACCGCGTAGCGAGACGCAGGATA AGGCATACAAAAACCCAGACAACGATCCGCGTGGCCCTTGGACTTCTGGCGATTTATCGGCAAGGAATTTCTACAGTTTA GGAACTTATCCGATTACCTGTCCTTCAAATCGGGTAATTTCAGGCCCGCCACCCGGGATGTATTGGCGGATATCAAAAGA AAAATTTGCTGAGCTTGATGCCGACAATCGCATCTGGTGGGGAAAGGATGGTAATAACACGCCACGGCTCAAACGTTTTC TTAATGAAGTCAAGCAAGGCATTGTTCCTCAAACGCTTTGGACTTACAGCAATGTGGGACACACACAGGATGCAAAAAAA CAATTGCTTGATGTCTTGCAGTTTGAGTCTTCGAGTGATGTTTTCTCTACGCCAAAGCCAGTACAACTGATGGAGCGGAT TTTGCGTATTGCCAGTAATCCTGGAGATACAGTGCTCGATTTCTTTGCAGGATCTGGAACATTTGGGCAGGCCGTCGCCA AACTCAACGCCGAAGATGGCGGTCACCGCAAATTCATCCTGATCAGCAACACCGAAGCGACGCAAGCACAACCAGACAAA AATCTATGCCGTGATGTTTGCGCTGAGCGCCTCCGGCGCGTGCTGGGCGGCTATACCAATACCAAGGGGCAGGCAGTCCC CGGGTTGGGCGGTGGTTTTGCTTACCTGCGGGCACGCCGGATTCCGCGGCATCGTCTTACTATGAAATTGGACCATGCCG AAGTGTGGCATGCGCTGCAACTGCTGCATGGCAAACCACTGACACCGTGGCCGGCATGTGGTTTTACTGTGGATGGTGAA TCTGGCGATGTCCTGGCTTACTTGGCGGATTTCCGCGTGTCTTCCATCACAAGGTTGGATGCATGGCTGGCTGGTGCGAC AGCTGGGGCTATGCTGTATAGCTGGGCGCCGGAGCGTTTAACCGAACGCATCGGGGGGCTGTCTTGCTTGCCGATTCCCC AATATTTGCGCGCACGCTTCGGACGTTGA
Upstream 100 bases:
>100_bases AACAAACGCTGTGCATTGATCACCCCTTGATTCACCTTGCGATCTAACGACGTTCCTTAACTGCCCACCTGTCAGGTGGC CTGAGTGAAATAACACCCCA
Downstream 100 bases:
>100_bases ACAGGCCTGCCATGCTCAACAATGTTCGGGATCCCTGCATCGTTGCTGATGACCGCATCGTACTGAGCGACATGGTGAAA CACCGCCACGATCAACCCAA
Product: adenine-specific DNA-methyltransferase
Products: NA
Alternate protein names: M.StyLTI; StyLTI methyltransferase [H]
Number of amino acids: Translated: 542; Mature: 541
Protein sequence:
>542_residues MPSQYDHLDRDALIRLLQRRDAERQLGLVWERDEIEADAAVNDDYVALSLDTSLSHGAAPWPNLIIEGDNFDALRALRMT HRGAIRCIYIDPPYNTGNRDFVYNDCFIDKTHRYRHSLWLEFIYRRLQLAKELLADDGVIFVSIDDNELFRLGMLMDRVF GHDHFIANVIWQKIFSPKNTAQHFSDDHEYILVFARNRTLWRSNPLPRSETQDKAYKNPDNDPRGPWTSGDLSARNFYSL GTYPITCPSNRVISGPPPGMYWRISKEKFAELDADNRIWWGKDGNNTPRLKRFLNEVKQGIVPQTLWTYSNVGHTQDAKK QLLDVLQFESSSDVFSTPKPVQLMERILRIASNPGDTVLDFFAGSGTFGQAVAKLNAEDGGHRKFILISNTEATQAQPDK NLCRDVCAERLRRVLGGYTNTKGQAVPGLGGGFAYLRARRIPRHRLTMKLDHAEVWHALQLLHGKPLTPWPACGFTVDGE SGDVLAYLADFRVSSITRLDAWLAGATAGAMLYSWAPERLTERIGGLSCLPIPQYLRARFGR
Sequences:
>Translated_542_residues MPSQYDHLDRDALIRLLQRRDAERQLGLVWERDEIEADAAVNDDYVALSLDTSLSHGAAPWPNLIIEGDNFDALRALRMT HRGAIRCIYIDPPYNTGNRDFVYNDCFIDKTHRYRHSLWLEFIYRRLQLAKELLADDGVIFVSIDDNELFRLGMLMDRVF GHDHFIANVIWQKIFSPKNTAQHFSDDHEYILVFARNRTLWRSNPLPRSETQDKAYKNPDNDPRGPWTSGDLSARNFYSL GTYPITCPSNRVISGPPPGMYWRISKEKFAELDADNRIWWGKDGNNTPRLKRFLNEVKQGIVPQTLWTYSNVGHTQDAKK QLLDVLQFESSSDVFSTPKPVQLMERILRIASNPGDTVLDFFAGSGTFGQAVAKLNAEDGGHRKFILISNTEATQAQPDK NLCRDVCAERLRRVLGGYTNTKGQAVPGLGGGFAYLRARRIPRHRLTMKLDHAEVWHALQLLHGKPLTPWPACGFTVDGE SGDVLAYLADFRVSSITRLDAWLAGATAGAMLYSWAPERLTERIGGLSCLPIPQYLRARFGR >Mature_541_residues PSQYDHLDRDALIRLLQRRDAERQLGLVWERDEIEADAAVNDDYVALSLDTSLSHGAAPWPNLIIEGDNFDALRALRMTH RGAIRCIYIDPPYNTGNRDFVYNDCFIDKTHRYRHSLWLEFIYRRLQLAKELLADDGVIFVSIDDNELFRLGMLMDRVFG HDHFIANVIWQKIFSPKNTAQHFSDDHEYILVFARNRTLWRSNPLPRSETQDKAYKNPDNDPRGPWTSGDLSARNFYSLG TYPITCPSNRVISGPPPGMYWRISKEKFAELDADNRIWWGKDGNNTPRLKRFLNEVKQGIVPQTLWTYSNVGHTQDAKKQ LLDVLQFESSSDVFSTPKPVQLMERILRIASNPGDTVLDFFAGSGTFGQAVAKLNAEDGGHRKFILISNTEATQAQPDKN LCRDVCAERLRRVLGGYTNTKGQAVPGLGGGFAYLRARRIPRHRLTMKLDHAEVWHALQLLHGKPLTPWPACGFTVDGES GDVLAYLADFRVSSITRLDAWLAGATAGAMLYSWAPERLTERIGGLSCLPIPQYLRARFGR
Specific function: Binds the system-specific DNA recognition site 5'-CAGAG- 3'. Necessary for restriction and for methylation of A-4 [H]
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002295 - InterPro: IPR002941 - InterPro: IPR002052 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 61636; Mature: 61504
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSQYDHLDRDALIRLLQRRDAERQLGLVWERDEIEADAAVNDDYVALSLDTSLSHGAAP CCCCCCCCCHHHHHHHHHHCCHHHHHCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCC WPNLIIEGDNFDALRALRMTHRGAIRCIYIDPPYNTGNRDFVYNDCFIDKTHRYRHSLWL CCCEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECEEECCHHHHHHHHHH EFIYRRLQLAKELLADDGVIFVSIDDNELFRLGMLMDRVFGHDHFIANVIWQKIFSPKNT HHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCH AQHFSDDHEYILVFARNRTLWRSNPLPRSETQDKAYKNPDNDPRGPWTSGDLSARNFYSL HHHCCCCCCEEEEEECCCEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEC GTYPITCPSNRVISGPPPGMYWRISKEKFAELDADNRIWWGKDGNNTPRLKRFLNEVKQG CCEEEECCCCCEECCCCCCCEEEECHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHC IVPQTLWTYSNVGHTQDAKKQLLDVLQFESSSDVFSTPKPVQLMERILRIASNPGDTVLD CCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHH FFAGSGTFGQAVAKLNAEDGGHRKFILISNTEATQAQPDKNLCRDVCAERLRRVLGGYTN HHCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC TKGQAVPGLGGGFAYLRARRIPRHRLTMKLDHAEVWHALQLLHGKPLTPWPACGFTVDGE CCCCCCCCCCCHHHHHHHHCCCCHHEEEEECHHHHHHHHHHHCCCCCCCCCCCCEEECCC SGDVLAYLADFRVSSITRLDAWLAGATAGAMLYSWAPERLTERIGGLSCLPIPQYLRARF CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEECCCHHHHHHHC GR CC >Mature Secondary Structure PSQYDHLDRDALIRLLQRRDAERQLGLVWERDEIEADAAVNDDYVALSLDTSLSHGAAP CCCCCCCCHHHHHHHHHHCCHHHHHCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCC WPNLIIEGDNFDALRALRMTHRGAIRCIYIDPPYNTGNRDFVYNDCFIDKTHRYRHSLWL CCCEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECEEECCHHHHHHHHHH EFIYRRLQLAKELLADDGVIFVSIDDNELFRLGMLMDRVFGHDHFIANVIWQKIFSPKNT HHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCH AQHFSDDHEYILVFARNRTLWRSNPLPRSETQDKAYKNPDNDPRGPWTSGDLSARNFYSL HHHCCCCCCEEEEEECCCEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEC GTYPITCPSNRVISGPPPGMYWRISKEKFAELDADNRIWWGKDGNNTPRLKRFLNEVKQG CCEEEECCCCCEECCCCCCCEEEECHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHC IVPQTLWTYSNVGHTQDAKKQLLDVLQFESSSDVFSTPKPVQLMERILRIASNPGDTVLD CCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHH FFAGSGTFGQAVAKLNAEDGGHRKFILISNTEATQAQPDKNLCRDVCAERLRRVLGGYTN HHCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC TKGQAVPGLGGGFAYLRARRIPRHRLTMKLDHAEVWHALQLLHGKPLTPWPACGFTVDGE CCCCCCCCCCCHHHHHHHHCCCCHHEEEEECHHHHHHHHHHHCCCCCCCCCCCCEEECCC SGDVLAYLADFRVSSITRLDAWLAGATAGAMLYSWAPERLTERIGGLSCLPIPQYLRARF CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEECCCHHHHHHHC GR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8387444; 11677609 [H]