| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is fabH [H]
Identifier: 182681430
GI number: 182681430
Start: 1040279
End: 1041295
Strand: Direct
Name: fabH [H]
Synonym: XfasM23_0881
Alternate gene names: 182681430
Gene position: 1040279-1041295 (Clockwise)
Preceding gene: 182681429
Following gene: 182681431
Centisome position: 41.03
GC content: 53.79
Gene sequence:
>1017_bases ATGCTCTTCAATAATGTCTCGATTGCGGGACTGGCTCACATTGATGCCCCGTGTACACTCACGTCGCAGGAAATTAACGC CCGTTTGCAACCGATGCTTGAGCGGATTGGCATTAAAAGCGATGTCTTCGCCGATATTGTCGGCATCAATGCACGCCGGT TGTGGAATACCAACGTACAGACCTCCGATGTTGCAACGATGGCAGCGCGTAAAGCATTGCAGGATGCAGGGGTGGCTGTG GACCGTATCGGCTTGGTGGTCAACACTTCGGTGAGTCGCGATTACCTAGAACCGTCCACTGCTTCGATTGTCTCCGGCAA CCTTGGTGTTGGCGAGCAATGCATTGCCTTCGATGTGGCCAATGCCTGCCTGGCCTTCCTAAACGGCATGGACATTGCGG GACAAATGCTGGAGCGTGGGGACATTGATTATGCCTTGGTGGTTAACGCCGAGACTGCTAACCGTGTTTATGAAAAAACG CTTGAGCGGATGAGTGCCCCAGGTGTTACCGAGCAGGAGTTCCGCGAGGAAATGGCGGCCTTAACCCTGGGGTGCGGTGC GGTGGCGATGGTACTGGCGCGTACCGCTTTGGTGCCTGATGCACCTCAATACAAAGGGGGAGTGACCCGCTCTGCGACTG AATGGAACAAGCTATGTTGCGGGAATCTGGATCGCATGGTTACTGACACCCGCTTGATGCTCATTGAGGGGATCAAACTA GCAAAGAAAACCTTTGTTGTCGCCAAACAAGTGCTGGGTTGGGCGGTGGAGGAGTTGGATCAGTTTGTTATCCACCAGGT CAGCCGCCCACACACTGAGGCGTTTATCAAGTCATTCGGTATTGATCCCGCCAAGGTGATGACCATTTTCCGTGAGTACG GCAACATCGGCCCCGCTTCTGTGCCGATTGTGCTGAGTAAGCTCAAGGAACTGGGCCGTCTCAAAAAAGGTGACCGCATT GCCTTGCTGGGTATTGGTTCGGGGCTGAATTGTTCTATGGCAGAAGTTGTGTGGTGA
Upstream 100 bases:
>100_bases TAAAAGCGTTTAATCGCTAAAGTAACTTTTAATTAAACTGCCGGAAACCTCTTTTTGGAATCTGGCTCTATTTTTTTATT TACTTTAGCGTACTCATTTT
Downstream 100 bases:
>100_bases TTCCAAAATGGGCCGATAGGCACTTGATCTTGTAGAAATGACTGAGAATCTTTCGGATTTTCCCAGCATGTTCATTCCTT ACAGATCAATGCTCAATGCA
Product: 3-oxoacyl-(acyl carrier protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MLFNNVSIAGLAHIDAPCTLTSQEINARLQPMLERIGIKSDVFADIVGINARRLWNTNVQTSDVATMAARKALQDAGVAV DRIGLVVNTSVSRDYLEPSTASIVSGNLGVGEQCIAFDVANACLAFLNGMDIAGQMLERGDIDYALVVNAETANRVYEKT LERMSAPGVTEQEFREEMAALTLGCGAVAMVLARTALVPDAPQYKGGVTRSATEWNKLCCGNLDRMVTDTRLMLIEGIKL AKKTFVVAKQVLGWAVEELDQFVIHQVSRPHTEAFIKSFGIDPAKVMTIFREYGNIGPASVPIVLSKLKELGRLKKGDRI ALLGIGSGLNCSMAEVVW
Sequences:
>Translated_338_residues MLFNNVSIAGLAHIDAPCTLTSQEINARLQPMLERIGIKSDVFADIVGINARRLWNTNVQTSDVATMAARKALQDAGVAV DRIGLVVNTSVSRDYLEPSTASIVSGNLGVGEQCIAFDVANACLAFLNGMDIAGQMLERGDIDYALVVNAETANRVYEKT LERMSAPGVTEQEFREEMAALTLGCGAVAMVLARTALVPDAPQYKGGVTRSATEWNKLCCGNLDRMVTDTRLMLIEGIKL AKKTFVVAKQVLGWAVEELDQFVIHQVSRPHTEAFIKSFGIDPAKVMTIFREYGNIGPASVPIVLSKLKELGRLKKGDRI ALLGIGSGLNCSMAEVVW >Mature_338_residues MLFNNVSIAGLAHIDAPCTLTSQEINARLQPMLERIGIKSDVFADIVGINARRLWNTNVQTSDVATMAARKALQDAGVAV DRIGLVVNTSVSRDYLEPSTASIVSGNLGVGEQCIAFDVANACLAFLNGMDIAGQMLERGDIDYALVVNAETANRVYEKT LERMSAPGVTEQEFREEMAALTLGCGAVAMVLARTALVPDAPQYKGGVTRSATEWNKLCCGNLDRMVTDTRLMLIEGIKL AKKTFVVAKQVLGWAVEELDQFVIHQVSRPHTEAFIKSFGIDPAKVMTIFREYGNIGPASVPIVLSKLKELGRLKKGDRI ALLGIGSGLNCSMAEVVW
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=301, Percent_Identity=27.906976744186, Blast_Score=87, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.41 [H]
Molecular weight: Translated: 36532; Mature: 36532
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFNNVSIAGLAHIDAPCTLTSQEINARLQPMLERIGIKSDVFADIVGINARRLWNTNVQ CCCCCCEEEEEEECCCCCEECHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHEEECCCCC TSDVATMAARKALQDAGVAVDRIGLVVNTSVSRDYLEPSTASIVSGNLGVGEQCIAFDVA HHHHHHHHHHHHHHHCCCHHHHHCEEEECCCCHHHCCCCHHHHEECCCCCCCHHHHHHHH NACLAFLNGMDIAGQMLERGDIDYALVVNAETANRVYEKTLERMSAPGVTEQEFREEMAA HHHHHHHCCCHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LTLGCGAVAMVLARTALVPDAPQYKGGVTRSATEWNKLCCGNLDRMVTDTRLMLIEGIKL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH AKKTFVVAKQVLGWAVEELDQFVIHQVSRPHTEAFIKSFGIDPAKVMTIFREYGNIGPAS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCH VPIVLSKLKELGRLKKGDRIALLGIGSGLNCSMAEVVW HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHCC >Mature Secondary Structure MLFNNVSIAGLAHIDAPCTLTSQEINARLQPMLERIGIKSDVFADIVGINARRLWNTNVQ CCCCCCEEEEEEECCCCCEECHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHEEECCCCC TSDVATMAARKALQDAGVAVDRIGLVVNTSVSRDYLEPSTASIVSGNLGVGEQCIAFDVA HHHHHHHHHHHHHHHCCCHHHHHCEEEECCCCHHHCCCCHHHHEECCCCCCCHHHHHHHH NACLAFLNGMDIAGQMLERGDIDYALVVNAETANRVYEKTLERMSAPGVTEQEFREEMAA HHHHHHHCCCHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LTLGCGAVAMVLARTALVPDAPQYKGGVTRSATEWNKLCCGNLDRMVTDTRLMLIEGIKL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH AKKTFVVAKQVLGWAVEELDQFVIHQVSRPHTEAFIKSFGIDPAKVMTIFREYGNIGPAS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCH VPIVLSKLKELGRLKKGDRIALLGIGSGLNCSMAEVVW HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA