| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681413
Identifier: 182681413
GI number: 182681413
Start: 1012914
End: 1013948
Strand: Direct
Name: 182681413
Synonym: XfasM23_0863
Alternate gene names: NA
Gene position: 1012914-1013948 (Clockwise)
Preceding gene: 182681412
Following gene: 182681415
Centisome position: 39.95
GC content: 54.3
Gene sequence:
>1035_bases ATGAACAAGAAGCACTATTTGTTGTACGGATCAGAACGCTATGCACTGGCGATTCTGCGTCCGCTACAGGCAGCGATTCG GGCGCGTGGTGATGAGGCAGCATGGTTCTTCGATGGTCCAGGCGCAGAGGACCTTGCGGCTGACGAGCAGTTACTCAGTG TGGCGCAGGTGCGTCTCTGGAAGCCATACGCGGTGATCACCAGTAGTAATGCGGTGCCGCATTTTTTTCCAGGTGTGAAG GTTGAGGTGTTTCATGGCTTCAATGCGGGCAAACCGCGTCATGTCTATAGCCGTGGTTTCTTTGATCTGTATTGCACTAC TGGCCCGCGTGATACTGCTGCGTTCGGTGAGCTGGCCGACAGGCTCGGCCACTTTGCAGTGAAGCAGACCGGATGGCCAA AGATCGATCCGTTTATGGGTGAGATGAGCCAAGCATTGGTTCCAGTACGCCAGCCACCAGTGATTCTCTATCATTCGACG TTCTCGCCATCGTGGAGCGCAGCTGACATCCTTTACGATGAGATCAAGCGTTTGTCGTTGCGTGGTGAGTGGCGTTGGAT TGTGACGTTCCATCCGAAGATGAATCCAGATGTGGTCGCGCGCTATCGTGCGCTGCAGAGCGAGCATCTGTGTTTTTCCG ATAATGACAATATTCTTGAGCTGTTTCCGCATGTCGACATGATGTGTTCCGACACTTCTTCGGCGCTGAACGAGTTCCTG TTGACCTGCAAGCCAGTTGTAACGTTTAAAAACAGGAATCCTGGGCCACAACTGATCGATATTGATGATCCCGCTCAGTT TGAGTCGGCGATCCGGCGTGCCTTGTCCCGTCCGCCGGAACTGCTGTCTGCCATCCGTGCCTATGCGGATGCGATCCATC CATACTGGGATGGCCGTTCTAGTGAGCGCGTCCTTGAGGCTATTGATGCCTTCGTCGCTGAGGGAGGACGTAATCGCCGC ACCAAGCCGTTGAATCTATGGCGTAAGTTCAAGCTGCGTAAACGCATCGGCTATTGGGGGCCTGCGTGGCTGTGA
Upstream 100 bases:
>100_bases ATGCGCTCTATAAGCGGATGCGTTACTACGAGATGCGGCGCAATCCTGATTCGATCCAACAGGCGCGCACACAATTGTGT AAGCATCGTTTGGAGCATGA
Downstream 100 bases:
>100_bases GTGTTGCTGTGTGCTTTGATGTTACGAGAGATGTTTGCGCTCTTACCTGTCTGTTGTTGGTGTGTGTATGTGGAGTGCGT GATGCGTGTGCGTCCGTATG
Product: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MNKKHYLLYGSERYALAILRPLQAAIRARGDEAAWFFDGPGAEDLAADEQLLSVAQVRLWKPYAVITSSNAVPHFFPGVK VEVFHGFNAGKPRHVYSRGFFDLYCTTGPRDTAAFGELADRLGHFAVKQTGWPKIDPFMGEMSQALVPVRQPPVILYHST FSPSWSAADILYDEIKRLSLRGEWRWIVTFHPKMNPDVVARYRALQSEHLCFSDNDNILELFPHVDMMCSDTSSALNEFL LTCKPVVTFKNRNPGPQLIDIDDPAQFESAIRRALSRPPELLSAIRAYADAIHPYWDGRSSERVLEAIDAFVAEGGRNRR TKPLNLWRKFKLRKRIGYWGPAWL
Sequences:
>Translated_344_residues MNKKHYLLYGSERYALAILRPLQAAIRARGDEAAWFFDGPGAEDLAADEQLLSVAQVRLWKPYAVITSSNAVPHFFPGVK VEVFHGFNAGKPRHVYSRGFFDLYCTTGPRDTAAFGELADRLGHFAVKQTGWPKIDPFMGEMSQALVPVRQPPVILYHST FSPSWSAADILYDEIKRLSLRGEWRWIVTFHPKMNPDVVARYRALQSEHLCFSDNDNILELFPHVDMMCSDTSSALNEFL LTCKPVVTFKNRNPGPQLIDIDDPAQFESAIRRALSRPPELLSAIRAYADAIHPYWDGRSSERVLEAIDAFVAEGGRNRR TKPLNLWRKFKLRKRIGYWGPAWL >Mature_344_residues MNKKHYLLYGSERYALAILRPLQAAIRARGDEAAWFFDGPGAEDLAADEQLLSVAQVRLWKPYAVITSSNAVPHFFPGVK VEVFHGFNAGKPRHVYSRGFFDLYCTTGPRDTAAFGELADRLGHFAVKQTGWPKIDPFMGEMSQALVPVRQPPVILYHST FSPSWSAADILYDEIKRLSLRGEWRWIVTFHPKMNPDVVARYRALQSEHLCFSDNDNILELFPHVDMMCSDTSSALNEFL LTCKPVVTFKNRNPGPQLIDIDDPAQFESAIRRALSRPPELLSAIRAYADAIHPYWDGRSSERVLEAIDAFVAEGGRNRR TKPLNLWRKFKLRKRIGYWGPAWL
Specific function: Unknown
COG id: COG1887
COG function: function code M; Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39194; Mature: 39194
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKHYLLYGSERYALAILRPLQAAIRARGDEAAWFFDGPGAEDLAADEQLLSVAQVRLW CCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHC KPYAVITSSNAVPHFFPGVKVEVFHGFNAGKPRHVYSRGFFDLYCTTGPRDTAAFGELAD CCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEECCCCCEEEEECCCCCCHHHHHHHHH RLGHFAVKQTGWPKIDPFMGEMSQALVPVRQPPVILYHSTFSPSWSAADILYDEIKRLSL HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHC RGEWRWIVTFHPKMNPDVVARYRALQSEHLCFSDNDNILELFPHVDMMCSDTSSALNEFL CCCEEEEEEECCCCCHHHHHHHHHHHCCCCEECCCCCCEEECCCCCCEECCHHHHHHHHH LTCKPVVTFKNRNPGPQLIDIDDPAQFESAIRRALSRPPELLSAIRAYADAIHPYWDGRS HHCCEEEEECCCCCCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC SERVLEAIDAFVAEGGRNRRTKPLNLWRKFKLRKRIGYWGPAWL HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNKKHYLLYGSERYALAILRPLQAAIRARGDEAAWFFDGPGAEDLAADEQLLSVAQVRLW CCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHC KPYAVITSSNAVPHFFPGVKVEVFHGFNAGKPRHVYSRGFFDLYCTTGPRDTAAFGELAD CCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEECCCCCEEEEECCCCCCHHHHHHHHH RLGHFAVKQTGWPKIDPFMGEMSQALVPVRQPPVILYHSTFSPSWSAADILYDEIKRLSL HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHC RGEWRWIVTFHPKMNPDVVARYRALQSEHLCFSDNDNILELFPHVDMMCSDTSSALNEFL CCCEEEEEEECCCCCHHHHHHHHHHHCCCCEECCCCCCEEECCCCCCEECCHHHHHHHHH LTCKPVVTFKNRNPGPQLIDIDDPAQFESAIRRALSRPPELLSAIRAYADAIHPYWDGRS HHCCEEEEECCCCCCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC SERVLEAIDAFVAEGGRNRRTKPLNLWRKFKLRKRIGYWGPAWL HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA