| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is waaE [H]
Identifier: 182681412
GI number: 182681412
Start: 1012042
End: 1012917
Strand: Direct
Name: waaE [H]
Synonym: XfasM23_0862
Alternate gene names: 182681412
Gene position: 1012042-1012917 (Clockwise)
Preceding gene: 182681411
Following gene: 182681413
Centisome position: 39.91
GC content: 54.22
Gene sequence:
>876_bases ATGCGAATGGAGCGAGAGGATCACAGTCCCCAGGCAGAGTCTGCCGTGTTGTTGCCCATGAGTTTGGTGGTGATGACCTA CAACGAGGCGGCCAATATCGCACGTTGCTTGGACAGTGTGCCGTTTGTTTCCGAAAAACTCGTGGTGGATTGTGGCAGTA CGGATGAAACGGTGGAGATTGCACGCGCTCATGGCGCTCGTGTGGTCGAGCAGGCGTGGTTGGGGTTTGGACCGCAACGC AATTTTGCTTCTGAGCAAGCGACCTATGATTGGATCTTAGTCCTTGATGCTGACGAATTTCTGTCGCACTTGCTACGTGA AGAATGTTTGCGGCGTTTGCCGGAGTTGCTGTTGGATGAAGGTCGTGAGAAGCCATTAGCCGCAATTTGGCTGCGCCGCA GTACCTGGTACATGGGGGCACCGATGCGTTGGTACCGGCCGATGGTGGGGGAGCACTTGGCCCGTGTGTATCATCGTCGC CGCGCCTTTTGGACTGAAGTGCGTGTTCATGAATCGCTGTGTTTTGATGGTCGCAGCGCTGAGTTTGTTGCTCCGTTCCA TCATCTGCACAATCCGACGTTGGTGCACAAGCAGTTGAAGGTGTTGCGTTATGCCGAGTTAAAAGCGTTGGACTGGAATA GCAAAGCGCGGTCGGCGCGTATGTGGCAAGCGCCGTTGGTATTTGTGGCTGCTTTCTTAAAGGATTATGTGCTCCGCTTG GCGATACTCGATGGTTGGCGTGGGTTTGTGGTGGCGCAGACGGCTGCCAGTTATGCGCTCTATAAGCGGATGCGTTACTA CGAGATGCGGCGCAATCCTGATTCGATCCAACAGGCGCGCACACAATTGTGTAAGCATCGTTTGGAGCATGAATGA
Upstream 100 bases:
>100_bases TGGCAGTTGGTGTGTGTATTGGTTTGGCGTTGCGTGAGGTGAAGTTGCGGGGCGCTTTATAATTCTGATTCTTTATCAGA ACAGCCTGAAAAGAGTATAG
Downstream 100 bases:
>100_bases ACAAGAAGCACTATTTGTTGTACGGATCAGAACGCTATGCACTGGCGATTCTGCGTCCGCTACAGGCAGCGATTCGGGCG CGTGGTGATGAGGCAGCATG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MRMEREDHSPQAESAVLLPMSLVVMTYNEAANIARCLDSVPFVSEKLVVDCGSTDETVEIARAHGARVVEQAWLGFGPQR NFASEQATYDWILVLDADEFLSHLLREECLRRLPELLLDEGREKPLAAIWLRRSTWYMGAPMRWYRPMVGEHLARVYHRR RAFWTEVRVHESLCFDGRSAEFVAPFHHLHNPTLVHKQLKVLRYAELKALDWNSKARSARMWQAPLVFVAAFLKDYVLRL AILDGWRGFVVAQTAASYALYKRMRYYEMRRNPDSIQQARTQLCKHRLEHE
Sequences:
>Translated_291_residues MRMEREDHSPQAESAVLLPMSLVVMTYNEAANIARCLDSVPFVSEKLVVDCGSTDETVEIARAHGARVVEQAWLGFGPQR NFASEQATYDWILVLDADEFLSHLLREECLRRLPELLLDEGREKPLAAIWLRRSTWYMGAPMRWYRPMVGEHLARVYHRR RAFWTEVRVHESLCFDGRSAEFVAPFHHLHNPTLVHKQLKVLRYAELKALDWNSKARSARMWQAPLVFVAAFLKDYVLRL AILDGWRGFVVAQTAASYALYKRMRYYEMRRNPDSIQQARTQLCKHRLEHE >Mature_291_residues MRMEREDHSPQAESAVLLPMSLVVMTYNEAANIARCLDSVPFVSEKLVVDCGSTDETVEIARAHGARVVEQAWLGFGPQR NFASEQATYDWILVLDADEFLSHLLREECLRRLPELLLDEGREKPLAAIWLRRSTWYMGAPMRWYRPMVGEHLARVYHRR RAFWTEVRVHESLCFDGRSAEFVAPFHHLHNPTLVHKQLKVLRYAELKALDWNSKARSARMWQAPLVFVAAFLKDYVLRL AILDGWRGFVVAQTAASYALYKRMRYYEMRRNPDSIQQARTQLCKHRLEHE
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 34042; Mature: 34042
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMEREDHSPQAESAVLLPMSLVVMTYNEAANIARCLDSVPFVSEKLVVDCGSTDETVEI CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHH ARAHGARVVEQAWLGFGPQRNFASEQATYDWILVLDADEFLSHLLREECLRRLPELLLDE HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHC GREKPLAAIWLRRSTWYMGAPMRWYRPMVGEHLARVYHRRRAFWTEVRVHESLCFDGRSA CCCCCHHHHEEECCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EFVAPFHHLHNPTLVHKQLKVLRYAELKALDWNSKARSARMWQAPLVFVAAFLKDYVLRL CEEHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AILDGWRGFVVAQTAASYALYKRMRYYEMRRNPDSIQQARTQLCKHRLEHE HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRMEREDHSPQAESAVLLPMSLVVMTYNEAANIARCLDSVPFVSEKLVVDCGSTDETVEI CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHH ARAHGARVVEQAWLGFGPQRNFASEQATYDWILVLDADEFLSHLLREECLRRLPELLLDE HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHC GREKPLAAIWLRRSTWYMGAPMRWYRPMVGEHLARVYHRRRAFWTEVRVHESLCFDGRSA CCCCCHHHHEEECCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EFVAPFHHLHNPTLVHKQLKVLRYAELKALDWNSKARSARMWQAPLVFVAAFLKDYVLRL CEEHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AILDGWRGFVVAQTAASYALYKRMRYYEMRRNPDSIQQARTQLCKHRLEHE HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11371519 [H]