| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681402
Identifier: 182681402
GI number: 182681402
Start: 1003246
End: 1004583
Strand: Direct
Name: 182681402
Synonym: XfasM23_0851
Alternate gene names: NA
Gene position: 1003246-1004583 (Clockwise)
Preceding gene: 182681399
Following gene: 182681403
Centisome position: 39.57
GC content: 51.79
Gene sequence:
>1338_bases ATGTCGACTAAGTTGAGCCATGTGTTGCAGGAGCTGCGCGATGTGCGGCAAGCATCGCACAAGGTGTCGCAGGGCGCGCG CGTATTGTTTCCGTGTGAATTGCTATCAGCGCTTTCTCTCTTGCAGACTTCGGCACAGGCGAGTTATCAGGCGGTGGTCG AGACTGGTCTAGGATTGGCGAGGGGTTTGCGTGAGCAGATTCTGAAGGCGGCGGCCATACTTGGTGTGGCAGATCCATCC GGGATATACATCCAACCTGAGGATGAACATAGGCTTGATGTGGTCGGACGGCTGTTCGAGGCGATGTTGCGTGATAGTTG CTTATATCCACAATCGCGTGTGTGGATTGGGCACTTGTTGGTGCCGGTTGCGAAGGTTGCATTGCGTGACAGTTGTTTAT TAGAGACTGATCACCATCCGGTATGGCGGTTACTGATGTTGTTAGTCGATGCTTGCAATGGCAACAAGGGGGAGGATCCA GCTGAGCATGCGTTATTGATGCAGGTGCGCGAGACTGTAGAGACGGTAGTCCGTGAATTCGATGATGATGTGACTTTGTT CCAGACGCAGCAAGCCGCATTGAGTATGCATTATGAGCAGTATGTGGCCAAAACGCGGAATACCCAGCGTCATGTGGCTG AATGTGAGATCACCGAAGAGCGACGTCAACAGGCTCAACGGGTTGCTGATGATGCACTGAAGCAGTGCCTTCTGGGACAT GTGTTGCCTCAACAGATTGAACATTTTCTTAGGCGCATCTGGTGTGCTCATGTACAGCAGGTTGCGTTGCTTAATGATGA TAACGGCCAAGCGCTTAAGGCAGTCCTGGCATTGGGAGATGCATTGCTGGTCCAGTGGCGTCAGGCCAGCGAGGGAAGCA TCCCGGAACGACCTTGGTTGTATGAGGAGCGTGCTGGGATATTGGAGGCTTTCTGTATTGCTGGGATGACTCTGGTTGAA GCTGAAGCTGGGTTTGCCAATTTGCAGCATGTGTTGGCGGCGGCCACGCCACAATCGTCAGTGATTGCCACATCGACGCA GACTCAGAGTTTTGATACGTTCATCTCAGTACCGGATACGTCGGCTACATCCGAGTTGAATACTGCGAGTCCTTCCTATT TTCGTGAGCTTCCCCTGGGGACCTGGTTAGACTTTATTGGCATTGATGGTCGTATCCAAAGTGGCCAATTATCTTGGGTT AGCCCAATTTCAGGACGATTGATGTTTGTTAATCATCGTGGTCGACGTTTGTGTGTGACCGCTCCAGAGGAGCTTTCCAC ATTGATGTGCTTAGGGCGGTTACGTTTGCACCGTGCTGGAGATTCTTTGATGAGTTGA
Upstream 100 bases:
>100_bases GGACTTCATCTAGCATGCCTTTGCCGATTGAATTGAGGAGTACGTCTGCTTGTTTGGAGCGGTGGCGTGGAAGTTGCAAA TATTTCAGGATGCCCACTAG
Downstream 100 bases:
>100_bases TGACTCTGCTTCCCATGCATAGGGGGGGGGATGCTGGATTAGTTGGTTTTATTGACGCCTGCTACGCTGGGGGAGCCTTT CTGCATAAAGGTTACGTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MSTKLSHVLQELRDVRQASHKVSQGARVLFPCELLSALSLLQTSAQASYQAVVETGLGLARGLREQILKAAAILGVADPS GIYIQPEDEHRLDVVGRLFEAMLRDSCLYPQSRVWIGHLLVPVAKVALRDSCLLETDHHPVWRLLMLLVDACNGNKGEDP AEHALLMQVRETVETVVREFDDDVTLFQTQQAALSMHYEQYVAKTRNTQRHVAECEITEERRQQAQRVADDALKQCLLGH VLPQQIEHFLRRIWCAHVQQVALLNDDNGQALKAVLALGDALLVQWRQASEGSIPERPWLYEERAGILEAFCIAGMTLVE AEAGFANLQHVLAAATPQSSVIATSTQTQSFDTFISVPDTSATSELNTASPSYFRELPLGTWLDFIGIDGRIQSGQLSWV SPISGRLMFVNHRGRRLCVTAPEELSTLMCLGRLRLHRAGDSLMS
Sequences:
>Translated_445_residues MSTKLSHVLQELRDVRQASHKVSQGARVLFPCELLSALSLLQTSAQASYQAVVETGLGLARGLREQILKAAAILGVADPS GIYIQPEDEHRLDVVGRLFEAMLRDSCLYPQSRVWIGHLLVPVAKVALRDSCLLETDHHPVWRLLMLLVDACNGNKGEDP AEHALLMQVRETVETVVREFDDDVTLFQTQQAALSMHYEQYVAKTRNTQRHVAECEITEERRQQAQRVADDALKQCLLGH VLPQQIEHFLRRIWCAHVQQVALLNDDNGQALKAVLALGDALLVQWRQASEGSIPERPWLYEERAGILEAFCIAGMTLVE AEAGFANLQHVLAAATPQSSVIATSTQTQSFDTFISVPDTSATSELNTASPSYFRELPLGTWLDFIGIDGRIQSGQLSWV SPISGRLMFVNHRGRRLCVTAPEELSTLMCLGRLRLHRAGDSLMS >Mature_444_residues STKLSHVLQELRDVRQASHKVSQGARVLFPCELLSALSLLQTSAQASYQAVVETGLGLARGLREQILKAAAILGVADPSG IYIQPEDEHRLDVVGRLFEAMLRDSCLYPQSRVWIGHLLVPVAKVALRDSCLLETDHHPVWRLLMLLVDACNGNKGEDPA EHALLMQVRETVETVVREFDDDVTLFQTQQAALSMHYEQYVAKTRNTQRHVAECEITEERRQQAQRVADDALKQCLLGHV LPQQIEHFLRRIWCAHVQQVALLNDDNGQALKAVLALGDALLVQWRQASEGSIPERPWLYEERAGILEAFCIAGMTLVEA EAGFANLQHVLAAATPQSSVIATSTQTQSFDTFISVPDTSATSELNTASPSYFRELPLGTWLDFIGIDGRIQSGQLSWVS PISGRLMFVNHRGRRLCVTAPEELSTLMCLGRLRLHRAGDSLMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49441; Mature: 49310
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKLSHVLQELRDVRQASHKVSQGARVLFPCELLSALSLLQTSAQASYQAVVETGLGLA CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGLREQILKAAAILGVADPSGIYIQPEDEHRLDVVGRLFEAMLRDSCLYPQSRVWIGHLL HHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH VPVAKVALRDSCLLETDHHPVWRLLMLLVDACNGNKGEDPAEHALLMQVRETVETVVREF HHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHC DDDVTLFQTQQAALSMHYEQYVAKTRNTQRHVAECEITEERRQQAQRVADDALKQCLLGH CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLPQQIEHFLRRIWCAHVQQVALLNDDNGQALKAVLALGDALLVQWRQASEGSIPERPWL HHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC YEERAGILEAFCIAGMTLVEAEAGFANLQHVLAAATPQSSVIATSTQTQSFDTFISVPDT HHHHHHHHHHHHHCCCHHEECCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEECCCC SATSELNTASPSYFRELPLGTWLDFIGIDGRIQSGQLSWVSPISGRLMFVNHRGRRLCVT CCCCCCCCCCHHHHHHCCHHHHHHHHCCCCEECCCCCEEECCCCCEEEEEECCCCEEEEE APEELSTLMCLGRLRLHRAGDSLMS CHHHHHHHHHHHHHHHHHCCHHHCC >Mature Secondary Structure STKLSHVLQELRDVRQASHKVSQGARVLFPCELLSALSLLQTSAQASYQAVVETGLGLA CCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGLREQILKAAAILGVADPSGIYIQPEDEHRLDVVGRLFEAMLRDSCLYPQSRVWIGHLL HHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH VPVAKVALRDSCLLETDHHPVWRLLMLLVDACNGNKGEDPAEHALLMQVRETVETVVREF HHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHC DDDVTLFQTQQAALSMHYEQYVAKTRNTQRHVAECEITEERRQQAQRVADDALKQCLLGH CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLPQQIEHFLRRIWCAHVQQVALLNDDNGQALKAVLALGDALLVQWRQASEGSIPERPWL HHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC YEERAGILEAFCIAGMTLVEAEAGFANLQHVLAAATPQSSVIATSTQTQSFDTFISVPDT HHHHHHHHHHHHHCCCHHEECCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEECCCC SATSELNTASPSYFRELPLGTWLDFIGIDGRIQSGQLSWVSPISGRLMFVNHRGRRLCVT CCCCCCCCCCHHHHHHCCHHHHHHHHCCCCEECCCCCEEECCCCCEEEEEECCCCEEEEE APEELSTLMCLGRLRLHRAGDSLMS CHHHHHHHHHHHHHHHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA