| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
Click here to switch to the map view.
The map label for this gene is nox [H]
Identifier: 197294850
GI number: 197294850
Start: 875623
End: 876963
Strand: Reverse
Name: nox [H]
Synonym: PAa_0837
Alternate gene names: 197294850
Gene position: 876963-875623 (Counterclockwise)
Preceding gene: 197294851
Following gene: 197294849
Centisome position: 99.66
GC content: 31.39
Gene sequence:
>1341_bases ATGAAAGTTATAATCATTGGTTGCACTCACGCAGGAACTGCAGCGGCCAAAACTATTAAAAAAACATCACCCCAAACTGA TATTGTAGTTTATGAGAGAAATGATAATATTTCCTTCCTTTCTTGTGGACTTGCATTATATGTTGGCGGAGTTGTTAAAG ATAGTCGTGGACTTTTTTATTCCAACCCTGAAGAATTAATCCACATGGGAATAAATACCAAATTACAACATGACGTTTTA AAAATAGATTTTGAAAAAAAAGAAGTTTTGGTTTGCAACCTAGAAACCAAACAAGAGTTTAAAGATAATTACGATAAATT AGTTATTGCGGCAGGATCATGGCCGGTTGTTCCTCCAATTGAAGGAATTCATAGCAAAAACGTTTTATTATCTAAAAACT TTAATCAAGCTAAAGAAATTATTTCTTATAGTCAAAAAGTTAATAAAATAACAGTGGTTGGAGCCGGTTATATTGGAGTT GAATTAGCAGAAGCTTTTGCTTTGCGAAAAAAAGAAGTGGTTTTAATTGATGCCGAAACTCGTATTATGCCTAAATATTT AGATGAAGAATTTACTGATGTAGCTCAAAAAGAATTAACCGATCATGGAGTTAAATTAGCTTTAGGACAAAGAATAGTCG GTTTTGAAACAAAAGATGGATTAGTTACTAAAGTTAAAACCGACAAGGACACTTTTGAAACTGAAATGGTTATTATGTGT ATCGGATTCAAACCTAACACTAAATTATTTAATCAAGCTTTAAAAACCTTACCTAATGGTGCTTTAATAGTTAATGAATA TATGCAAACATCAAACCCTGATGTTTATGCTTGTGGGGATTGTGTTAATGTTTATTCCAACCCTAAAAAAATCACCCAAT ATATTCCTTTAGCAACTAATGCTGTTAGAATGGGAACACTTGTTGGTCTAAATTTAATGAAAAACCAAGTTAAATATTTA GGAACCCAAGGAACAAGCGGTATCAAAATCATTGATTTAAATATTTCTTCTACTGGTTTAACAGAAACAGTTGCCAAAGA ATTAGGAAAAAACTATGACACTGTTACCATTAAAGACGCTAACCGACCTGAATTTATGCCTGATTTTGAAACAGTTACTT TAAAATTAGTTTTTGACAAAGATTCTCGTAAAATTTTAGGTGGTCAAATCGTTTCTCGAATGGATTTAACTGAAAAAATA AACACTTTAAGTGTTTGTATTCAAAACGAAATGACAGTTGAACAATTAGCTTTTGTAGACTTTTTCTTCCAACCTCATTT TAATAAACCTTGGAGCCTTCTTAATTTGGCAGGACTCAAAGCTTTAGAAAAAAAGATTTAA
Upstream 100 bases:
>100_bases TATTTGTTTTGTCAACTTAGTTATTTTTTTATTGTATAATTAAAAGTGTATAGTTTAAGAGAAACTTGAAAGCAAAATAA AATTTTAAAAGGAGTTTATT
Downstream 100 bases:
>100_bases AACCATTTATTTTTCTTGAAAAAACAAAAAGGAGTTTTTTAAAATGCAATTTAGTTTGCCGCCTTTAAATTTTAAATATG ACGCTTTGGAACCATTTTTA
Product: Putative NADH oxidase H2O2-forming
Products: NA
Alternate protein names: NOXase [H]
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MKVIIIGCTHAGTAAAKTIKKTSPQTDIVVYERNDNISFLSCGLALYVGGVVKDSRGLFYSNPEELIHMGINTKLQHDVL KIDFEKKEVLVCNLETKQEFKDNYDKLVIAAGSWPVVPPIEGIHSKNVLLSKNFNQAKEIISYSQKVNKITVVGAGYIGV ELAEAFALRKKEVVLIDAETRIMPKYLDEEFTDVAQKELTDHGVKLALGQRIVGFETKDGLVTKVKTDKDTFETEMVIMC IGFKPNTKLFNQALKTLPNGALIVNEYMQTSNPDVYACGDCVNVYSNPKKITQYIPLATNAVRMGTLVGLNLMKNQVKYL GTQGTSGIKIIDLNISSTGLTETVAKELGKNYDTVTIKDANRPEFMPDFETVTLKLVFDKDSRKILGGQIVSRMDLTEKI NTLSVCIQNEMTVEQLAFVDFFFQPHFNKPWSLLNLAGLKALEKKI
Sequences:
>Translated_446_residues MKVIIIGCTHAGTAAAKTIKKTSPQTDIVVYERNDNISFLSCGLALYVGGVVKDSRGLFYSNPEELIHMGINTKLQHDVL KIDFEKKEVLVCNLETKQEFKDNYDKLVIAAGSWPVVPPIEGIHSKNVLLSKNFNQAKEIISYSQKVNKITVVGAGYIGV ELAEAFALRKKEVVLIDAETRIMPKYLDEEFTDVAQKELTDHGVKLALGQRIVGFETKDGLVTKVKTDKDTFETEMVIMC IGFKPNTKLFNQALKTLPNGALIVNEYMQTSNPDVYACGDCVNVYSNPKKITQYIPLATNAVRMGTLVGLNLMKNQVKYL GTQGTSGIKIIDLNISSTGLTETVAKELGKNYDTVTIKDANRPEFMPDFETVTLKLVFDKDSRKILGGQIVSRMDLTEKI NTLSVCIQNEMTVEQLAFVDFFFQPHFNKPWSLLNLAGLKALEKKI >Mature_446_residues MKVIIIGCTHAGTAAAKTIKKTSPQTDIVVYERNDNISFLSCGLALYVGGVVKDSRGLFYSNPEELIHMGINTKLQHDVL KIDFEKKEVLVCNLETKQEFKDNYDKLVIAAGSWPVVPPIEGIHSKNVLLSKNFNQAKEIISYSQKVNKITVVGAGYIGV ELAEAFALRKKEVVLIDAETRIMPKYLDEEFTDVAQKELTDHGVKLALGQRIVGFETKDGLVTKVKTDKDTFETEMVIMC IGFKPNTKLFNQALKTLPNGALIVNEYMQTSNPDVYACGDCVNVYSNPKKITQYIPLATNAVRMGTLVGLNLMKNQVKYL GTQGTSGIKIIDLNISSTGLTETVAKELGKNYDTVTIKDANRPEFMPDFETVTLKLVFDKDSRKILGGQIVSRMDLTEKI NTLSVCIQNEMTVEQLAFVDFFFQPHFNKPWSLLNLAGLKALEKKI
Specific function: Catalyzes the four-electron reduction of molecular oxygen to water [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI21389617, Length=332, Percent_Identity=24.3975903614458, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI65787454, Length=332, Percent_Identity=24.3975903614458, Blast_Score=80, Evalue=6e-15, Organism=Homo sapiens, GI226437568, Length=332, Percent_Identity=24.3975903614458, Blast_Score=79, Evalue=7e-15, Organism=Escherichia coli, GI1789065, Length=198, Percent_Identity=32.8282828282828, Blast_Score=105, Evalue=5e-24, Organism=Escherichia coli, GI87082354, Length=408, Percent_Identity=25.7352941176471, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1786307, Length=324, Percent_Identity=24.3827160493827, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1789765, Length=292, Percent_Identity=21.9178082191781, Blast_Score=75, Evalue=9e-15, Organism=Escherichia coli, GI1787352, Length=271, Percent_Identity=28.4132841328413, Blast_Score=65, Evalue=8e-12, Organism=Drosophila melanogaster, GI24585130, Length=187, Percent_Identity=29.4117647058824, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24639257, Length=292, Percent_Identity=23.2876712328767, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI281359715, Length=292, Percent_Identity=23.2876712328767, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI281359713, Length=292, Percent_Identity=23.2876712328767, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24639250, Length=292, Percent_Identity=23.2876712328767, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI18543267, Length=292, Percent_Identity=23.2876712328767, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24639252, Length=292, Percent_Identity=23.2876712328767, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.6.99.3 [H]
Molecular weight: Translated: 49637; Mature: 49637
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVIIIGCTHAGTAAAKTIKKTSPQTDIVVYERNDNISFLSCGLALYVGGVVKDSRGLFY CEEEEEEECCCCHHHHHHHHCCCCCCEEEEEEECCCEEEEEHHHHHHCCCEEECCCCCEE SNPEELIHMGINTKLQHDVLKIDFEKKEVLVCNLETKQEFKDNYDKLVIAAGSWPVVPPI CCHHHHEEECCCCCCCCCEEEEEECCCEEEEEECCHHHHHHCCCCEEEEEECCCCCCCCC EGIHSKNVLLSKNFNQAKEIISYSQKVNKITVVGAGYIGVELAEAFALRKKEVVLIDAET CCCCCCCEEEECCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCC RIMPKYLDEEFTDVAQKELTDHGVKLALGQRIVGFETKDGLVTKVKTDKDTFETEMVIMC CCCHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEECCCCEEEEEECCCCCCCCEEEEEE IGFKPNTKLFNQALKTLPNGALIVNEYMQTSNPDVYACGDCVNVYSNPKKITQYIPLATN ECCCCCHHHHHHHHHHCCCCEEEEEHHHHCCCCCEEEECCHHHHCCCHHHHHHHCCCCCC AVRMGTLVGLNLMKNQVKYLGTQGTSGIKIIDLNISSTGLTETVAKELGKNYDTVTIKDA HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEECC NRPEFMPDFETVTLKLVFDKDSRKILGGQIVSRMDLTEKINTLSVCIQNEMTVEQLAFVD CCCCCCCCCCEEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHH FFFQPHFNKPWSLLNLAGLKALEKKI HEECCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKVIIIGCTHAGTAAAKTIKKTSPQTDIVVYERNDNISFLSCGLALYVGGVVKDSRGLFY CEEEEEEECCCCHHHHHHHHCCCCCCEEEEEEECCCEEEEEHHHHHHCCCEEECCCCCEE SNPEELIHMGINTKLQHDVLKIDFEKKEVLVCNLETKQEFKDNYDKLVIAAGSWPVVPPI CCHHHHEEECCCCCCCCCEEEEEECCCEEEEEECCHHHHHHCCCCEEEEEECCCCCCCCC EGIHSKNVLLSKNFNQAKEIISYSQKVNKITVVGAGYIGVELAEAFALRKKEVVLIDAET CCCCCCCEEEECCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCC RIMPKYLDEEFTDVAQKELTDHGVKLALGQRIVGFETKDGLVTKVKTDKDTFETEMVIMC CCCHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEECCCCEEEEEECCCCCCCCEEEEEE IGFKPNTKLFNQALKTLPNGALIVNEYMQTSNPDVYACGDCVNVYSNPKKITQYIPLATN ECCCCCHHHHHHHHHHCCCCEEEEEHHHHCCCCCEEEECCHHHHCCCHHHHHHHCCCCCC AVRMGTLVGLNLMKNQVKYLGTQGTSGIKIIDLNISSTGLTETVAKELGKNYDTVTIKDA HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEECC NRPEFMPDFETVTLKLVFDKDSRKILGGQIVSRMDLTEKINTLSVCIQNEMTVEQLAFVD CCCCCCCCCCEEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHH FFFQPHFNKPWSLLNLAGLKALEKKI HEECCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1404382; 12663927; 2511195; 8262333 [H]