| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is fic
Identifier: 197294845
GI number: 197294845
Start: 869925
End: 870974
Strand: Direct
Name: fic
Synonym: PAa_0832
Alternate gene names: NA
Gene position: 869925-870974 (Clockwise)
Preceding gene: 197294834
Following gene: 197294852
Centisome position: 98.86
GC content: 25.81
Gene sequence:
>1050_bases TTGAAAATCTTTGATTACAATAAATTAAAAGACTTAAAAATTCCACACGACATCGCAAATATATTAAATAATATTTCACA ATATCAAGGTCGCCTAGGTTTATTCATTCAACAAAATAAATTAAAATCCCTTGATAATTTAATGATGCAATCAAAAATAT TTTCAATAGAATCATCTAACAAAATTGAAAATGTTTTCACCACCAACAAACGATTAAAAGAATTGTCTATTAACAAAATC AAACCTATCAATAGAAATGAAGAAGAAATTGTGGGATATAAAAACGTTTTGGATATAATTAATGAAAACTTTGATTCAAT TGAAATAAAACCTAATTATATTTTACAAATGCATCGCATTTTATATGATTACACAAATATTGATGGAGGGACTTATAAAA AAACTCAAAACTACATAACTCAAACATTAGCCAATAACGAAACAAAAATACGTTTTACTCCTATAGAACCTTATTTAATT TCCATTAAAATGGAAGAATTATGCAATACTTTCCAAGAAAACTTCAACAAACCGCAAACAAATAACCTCATCTTGATTTT TAATTTTATTTTTGATTTTGTCTCCATCCACCCTTTTACAGACGGAAATGGGCGTATCCAAAGGTTATTAATGACCCTTT TGTTATATAAAACAAACCACGTCATTGGAAAATACATTAGTTTAGATAAAATCATTGAATCAAGCAAAGAAACACACTAT GAAACTTTATTATCAAGTTCTTATAATTGGCACGAAAACACTAACGACACCACCCCTTTTATAAGATATATGTTAGGTAT TTTATTAAATGCTTATAAAACTTTTGAAAGAGCCGTTATTTTTCCTCATCTCCAAAAATTAACCGCGAAACAACAAATTG AATTAGTTTTTAAAAACACTTTATTAAAAATGACTAAAGCCAAAATAATTGAATTATTGCCTCACATAAGTCAAACTACA ATTGAGCTTTATTTGAACCAATTACTAAAAGAAAAATACATTACCAAAATCAATAATAATAAATTCAGCTATTACATTAA AAATAAATAA
Upstream 100 bases:
>100_bases TTCAACAAAAAAACAATCAACAATTATTTTTTTAATAATTATTAATTGCATAAAAATGTTATAATATATGCAGTTATTAA TAAAGAAAGGACTCCAAATT
Downstream 100 bases:
>100_bases AATAAAAAAAATTAAAATATCGCATTCTGAAAGAAAAAAAAGACAGAGTTAATAATGAGTTCTAAATTTTTTTTAAAAAT TAAAAAATATATAAGTTTTT
Product: Putative regulation factor cAMP
Products: NA
Alternate protein names: Fic Family Protein; AsnC Family Regulatory Protein; Fic Protein Family; Regulation Factor CAMP
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MKIFDYNKLKDLKIPHDIANILNNISQYQGRLGLFIQQNKLKSLDNLMMQSKIFSIESSNKIENVFTTNKRLKELSINKI KPINRNEEEIVGYKNVLDIINENFDSIEIKPNYILQMHRILYDYTNIDGGTYKKTQNYITQTLANNETKIRFTPIEPYLI SIKMEELCNTFQENFNKPQTNNLILIFNFIFDFVSIHPFTDGNGRIQRLLMTLLLYKTNHVIGKYISLDKIIESSKETHY ETLLSSSYNWHENTNDTTPFIRYMLGILLNAYKTFERAVIFPHLQKLTAKQQIELVFKNTLLKMTKAKIIELLPHISQTT IELYLNQLLKEKYITKINNNKFSYYIKNK
Sequences:
>Translated_349_residues MKIFDYNKLKDLKIPHDIANILNNISQYQGRLGLFIQQNKLKSLDNLMMQSKIFSIESSNKIENVFTTNKRLKELSINKI KPINRNEEEIVGYKNVLDIINENFDSIEIKPNYILQMHRILYDYTNIDGGTYKKTQNYITQTLANNETKIRFTPIEPYLI SIKMEELCNTFQENFNKPQTNNLILIFNFIFDFVSIHPFTDGNGRIQRLLMTLLLYKTNHVIGKYISLDKIIESSKETHY ETLLSSSYNWHENTNDTTPFIRYMLGILLNAYKTFERAVIFPHLQKLTAKQQIELVFKNTLLKMTKAKIIELLPHISQTT IELYLNQLLKEKYITKINNNKFSYYIKNK >Mature_349_residues MKIFDYNKLKDLKIPHDIANILNNISQYQGRLGLFIQQNKLKSLDNLMMQSKIFSIESSNKIENVFTTNKRLKELSINKI KPINRNEEEIVGYKNVLDIINENFDSIEIKPNYILQMHRILYDYTNIDGGTYKKTQNYITQTLANNETKIRFTPIEPYLI SIKMEELCNTFQENFNKPQTNNLILIFNFIFDFVSIHPFTDGNGRIQRLLMTLLLYKTNHVIGKYISLDKIIESSKETHY ETLLSSSYNWHENTNDTTPFIRYMLGILLNAYKTFERAVIFPHLQKLTAKQQIELVFKNTLLKMTKAKIIELLPHISQTT IELYLNQLLKEKYITKINNNKFSYYIKNK
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41252; Mature: 41252
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIFDYNKLKDLKIPHDIANILNNISQYQGRLGLFIQQNKLKSLDNLMMQSKIFSIESSN CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCC KIENVFTTNKRLKELSINKIKPINRNEEEIVGYKNVLDIINENFDSIEIKPNYILQMHRI CHHHHHHHHHHHHHHCHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHH LYDYTNIDGGTYKKTQNYITQTLANNETKIRFTPIEPYLISIKMEELCNTFQENFNKPQT HHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHCCCCCC NNLILIFNFIFDFVSIHPFTDGNGRIQRLLMTLLLYKTNHVIGKYISLDKIIESSKETHY CCEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETLLSSSYNWHENTNDTTPFIRYMLGILLNAYKTFERAVIFPHLQKLTAKQQIELVFKNT HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLKMTKAKIIELLPHISQTTIELYLNQLLKEKYITKINNNKFSYYIKNK HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC >Mature Secondary Structure MKIFDYNKLKDLKIPHDIANILNNISQYQGRLGLFIQQNKLKSLDNLMMQSKIFSIESSN CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCC KIENVFTTNKRLKELSINKIKPINRNEEEIVGYKNVLDIINENFDSIEIKPNYILQMHRI CHHHHHHHHHHHHHHCHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHH LYDYTNIDGGTYKKTQNYITQTLANNETKIRFTPIEPYLISIKMEELCNTFQENFNKPQT HHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHCCCCCC NNLILIFNFIFDFVSIHPFTDGNGRIQRLLMTLLLYKTNHVIGKYISLDKIIESSKETHY CCEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETLLSSSYNWHENTNDTTPFIRYMLGILLNAYKTFERAVIFPHLQKLTAKQQIELVFKNT HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLKMTKAKIIELLPHISQTTIELYLNQLLKEKYITKINNNKFSYYIKNK HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA