| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is pgsA [H]
Identifier: 197294830
GI number: 197294830
Start: 835645
End: 836295
Strand: Reverse
Name: pgsA [H]
Synonym: PAa_0816
Alternate gene names: 197294830
Gene position: 836295-835645 (Counterclockwise)
Preceding gene: 197294832
Following gene: 197294829
Centisome position: 95.04
GC content: 28.11
Gene sequence:
>651_bases GTGTTTCCTTTGCTAGCTAATTTAATGACCGTATTTCGTATTTTATTAATTTTTGTTCTTTTGCCTTTAATGTCTTTTGA TGAGTATGATTGGAAATTCATTTTAATTTTTCAAATTATTTTTATAGCAGCCGCACTCACTGATTATCTAGATGGTTATA TTGCTAGAAAGTATAAACAGCAAACAGTTTTTGGTAAATTTTTTGATCCGATTGCTGATAAACTGCTCGTGATTATCGCT CTTTTTTATCTTTGCCAATTTCGTTTTTTAACAATCCCAAAAAACTTTTTTATTGAGAAGCGTTTTTTCCTTCCTATTTT GATGGTAATTATTATTAGGGAGTTTTTGGTTTCGGGTGTTCGTATGTTGGCTGCTGAAAATGAAGTTGTGGTTGAGGCTT CTTTTTTAGGCAAAGCCAAAACTTTATTTACTTTTTTAGCTATTTTTTTCCTTTTTTTTGGTTTATATTTGAATACAGAA GGAATCCCTCCATCCATTAAAGAAATATTTAGACATATAAATAAAATTGGAGATGTTTTTTTACTTTTAGCAACTTTTTT AACTATTATTTCAGGGATAGATTATTTTTGCAAAAATTTTCAACTGATTGTGAAAAATTTTTCACCTAATGAACTTGATC CAAAAAAATAA
Upstream 100 bases:
>100_bases AGAAATAAATTTTTGCAAACAATTTGAATTTGACTAATCCAATCATTTTGTAATTTTGCGAATATTTACATGAAAAAAAT GTTTGAAAGTAGGTTTTTTT
Downstream 100 bases:
>100_bases TTTTTTTGAAAGTGAGTCATCAGAAGAAATAAAAAAATTTGGTGTTATCAGTTTTTTTAATTTTTCAGTTCTTGAGACTA AAGTAGATATATTTTCTGTT
Product: Phosphatidylglycerophosphate synthase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MFPLLANLMTVFRILLIFVLLPLMSFDEYDWKFILIFQIIFIAAALTDYLDGYIARKYKQQTVFGKFFDPIADKLLVIIA LFYLCQFRFLTIPKNFFIEKRFFLPILMVIIIREFLVSGVRMLAAENEVVVEASFLGKAKTLFTFLAIFFLFFGLYLNTE GIPPSIKEIFRHINKIGDVFLLLATFLTIISGIDYFCKNFQLIVKNFSPNELDPKK
Sequences:
>Translated_216_residues MFPLLANLMTVFRILLIFVLLPLMSFDEYDWKFILIFQIIFIAAALTDYLDGYIARKYKQQTVFGKFFDPIADKLLVIIA LFYLCQFRFLTIPKNFFIEKRFFLPILMVIIIREFLVSGVRMLAAENEVVVEASFLGKAKTLFTFLAIFFLFFGLYLNTE GIPPSIKEIFRHINKIGDVFLLLATFLTIISGIDYFCKNFQLIVKNFSPNELDPKK >Mature_216_residues MFPLLANLMTVFRILLIFVLLPLMSFDEYDWKFILIFQIIFIAAALTDYLDGYIARKYKQQTVFGKFFDPIADKLLVIIA LFYLCQFRFLTIPKNFFIEKRFFLPILMVIIIREFLVSGVRMLAAENEVVVEASFLGKAKTLFTFLAIFFLFFGLYLNTE GIPPSIKEIFRHINKIGDVFLLLATFLTIISGIDYFCKNFQLIVKNFSPNELDPKK
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=168, Percent_Identity=32.1428571428571, Blast_Score=76, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 25229; Mature: 25229
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPLLANLMTVFRILLIFVLLPLMSFDEYDWKFILIFQIIFIAAALTDYLDGYIARKYKQ CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTVFGKFFDPIADKLLVIIALFYLCQFRFLTIPKNFFIEKRFFLPILMVIIIREFLVSGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RMLAAENEVVVEASFLGKAKTLFTFLAIFFLFFGLYLNTEGIPPSIKEIFRHINKIGDVF HHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LLLATFLTIISGIDYFCKNFQLIVKNFSPNELDPKK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MFPLLANLMTVFRILLIFVLLPLMSFDEYDWKFILIFQIIFIAAALTDYLDGYIARKYKQ CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTVFGKFFDPIADKLLVIIALFYLCQFRFLTIPKNFFIEKRFFLPILMVIIIREFLVSGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RMLAAENEVVVEASFLGKAKTLFTFLAIFFLFFGLYLNTEGIPPSIKEIFRHINKIGDVF HHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LLLATFLTIISGIDYFCKNFQLIVKNFSPNELDPKK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA