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The map label for this gene is 197294829

Identifier: 197294829

GI number: 197294829

Start: 833979

End: 834650

Strand: Reverse

Name: 197294829

Synonym: PAa_0815

Alternate gene names: NA

Gene position: 834650-833979 (Counterclockwise)

Preceding gene: 197294830

Following gene: 197294828

Centisome position: 94.85

GC content: 30.51

Gene sequence:

>672_bases
ATGCCGACAGATGAAAATAGAAAAAAAGAATTATTTCAAGAATTTTTAAAAAATAAAAAAAATTTGCAAATCAGAAATCA
ACTTGTAGAAATTTATTACCCACTAGTTAATAAAATAGTTAGTAAGTTCAAATACTTCCCCTCAATACTTCAAAGACAAG
ATTTATTTCAAGAAGGCGTTTTAGGTTTAATCAATGCCCTCGAAGGGTATGATTTTCAAGTAGACATTGACCAGTTTATT
TATTATGCTTCAAAAAACATCAAATCTCACATCAGAGGCCTCATTAAAAAATGCCACCAAACAGCAATGCCTCGGCAAAA
CAATAAAAAAATAAATAAAGTTGATTTTGAAGAATGGGAAGAAGCAACACAACCCAAATGGAGCAAAATCCTTACGCCTC
ATCAACTATGGCTTAAACAAGCGCATCACGACATCTTTGTGCTAATATTAACCAAAAATTTAACTCCCAAGCAATTTGAT
GTAATCAAATTAAGTCTTGGAATTTCTGCAAAAGATGTTGAAGATAACAATAAATTTATTCGCTCCACCGAAGAAATTGC
GGAAGAATTAAAAAAGAAATACAATGAAAACTTTTCTCCGAGACAGGTATTTAAGCTCCGGGAAAATGGCATTATTAAAT
TACAAAAAATATTCAAAAAAAGGAGAAAATAA

Upstream 100 bases:

>100_bases
AAGACTGACTTATTTTAGTCGGTCTTTTTTTGTACCCAAAACTAAATAATAATAATTTTTCTATCTTTTCTAAAAAAACG
TTTTTTTAGAAAGGAGAACA

Downstream 100 bases:

>100_bases
CTAATGTTAAACAGAACCCAATTAATCGGCCGTCTAACAAACGACCCAAAAAAAGAATTTTTAAACAGCAAAGGAGAACA
AATTGCTAAAGTTGATTTTG

Product: DNA-directed RNA polymerase specialized sigma subunit

Products: NA

Alternate protein names: RNA Polymerase Sigma Factor; DNA-Directed RNA Polymerase Sigma Subunit

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MPTDENRKKELFQEFLKNKKNLQIRNQLVEIYYPLVNKIVSKFKYFPSILQRQDLFQEGVLGLINALEGYDFQVDIDQFI
YYASKNIKSHIRGLIKKCHQTAMPRQNNKKINKVDFEEWEEATQPKWSKILTPHQLWLKQAHHDIFVLILTKNLTPKQFD
VIKLSLGISAKDVEDNNKFIRSTEEIAEELKKKYNENFSPRQVFKLRENGIIKLQKIFKKRRK

Sequences:

>Translated_223_residues
MPTDENRKKELFQEFLKNKKNLQIRNQLVEIYYPLVNKIVSKFKYFPSILQRQDLFQEGVLGLINALEGYDFQVDIDQFI
YYASKNIKSHIRGLIKKCHQTAMPRQNNKKINKVDFEEWEEATQPKWSKILTPHQLWLKQAHHDIFVLILTKNLTPKQFD
VIKLSLGISAKDVEDNNKFIRSTEEIAEELKKKYNENFSPRQVFKLRENGIIKLQKIFKKRRK
>Mature_222_residues
PTDENRKKELFQEFLKNKKNLQIRNQLVEIYYPLVNKIVSKFKYFPSILQRQDLFQEGVLGLINALEGYDFQVDIDQFIY
YASKNIKSHIRGLIKKCHQTAMPRQNNKKINKVDFEEWEEATQPKWSKILTPHQLWLKQAHHDIFVLILTKNLTPKQFDV
IKLSLGISAKDVEDNNKFIRSTEEIAEELKKKYNENFSPRQVFKLRENGIIKLQKIFKKRRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26681; Mature: 26550

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS00715 SIGMA70_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTDENRKKELFQEFLKNKKNLQIRNQLVEIYYPLVNKIVSKFKYFPSILQRQDLFQEGV
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLINALEGYDFQVDIDQFIYYASKNIKSHIRGLIKKCHQTAMPRQNNKKINKVDFEEWE
HHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
EATQPKWSKILTPHQLWLKQAHHDIFVLILTKNLTPKQFDVIKLSLGISAKDVEDNNKFI
HHCCCHHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHEEEEEECCCCCCCCCCHHHH
RSTEEIAEELKKKYNENFSPRQVFKLRENGIIKLQKIFKKRRK
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
PTDENRKKELFQEFLKNKKNLQIRNQLVEIYYPLVNKIVSKFKYFPSILQRQDLFQEGV
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLINALEGYDFQVDIDQFIYYASKNIKSHIRGLIKKCHQTAMPRQNNKKINKVDFEEWE
HHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
EATQPKWSKILTPHQLWLKQAHHDIFVLILTKNLTPKQFDVIKLSLGISAKDVEDNNKFI
HHCCCHHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHEEEEEECCCCCCCCCCHHHH
RSTEEIAEELKKKYNENFSPRQVFKLRENGIIKLQKIFKKRRK
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA