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The map label for this gene is codA [H]

Identifier: 197294746

GI number: 197294746

Start: 730960

End: 731460

Strand: Reverse

Name: codA [H]

Synonym: PAa_0712

Alternate gene names: 197294746

Gene position: 731460-730960 (Counterclockwise)

Preceding gene: 197294747

Following gene: 197294745

Centisome position: 83.12

GC content: 31.74

Gene sequence:

>501_bases
ATGACTCAAAATGACAAAAATCTCTTTTTTATGAAAGCAGCTTTTCAAGAAGCTTATAAAGCTTATTTGAAAAAAGAAGT
TCCTGTGGGTGCGGTAGTTGTTTTAAATAACCAGATTATTGCGCGAGCTCACAACAATCGGAAACAAAAAAACCTTTTTT
TTGGTCATGCTGAATTTTTAGCCCTTATAAAAGCTAATAAAAAATTAAAAAATCGTCGTTTGACTAATTCTTCTGTCTAT
GTTACTTTAGAACCTTGTTTAATGTGTGCGGGTGCTTTAATTCAGGCCGGAGTTAAACATGTGTATTATGGTGCCGCTGA
TTCTAAAACCGGTTGCATCAAAAGCTTATTGACTTCTTTTGAACTCCCATTGCCTCATAAAGTTATTGCTCATTCAGGTT
TTTTAGCGCAAGAAAGTTCAGATCTTTTAAAAACCTTTTTTCAACAATTAAGAAAAAAAGATGGTTCTAAAAAGACAAAA
AATACATCTATTTTATTATAA

Upstream 100 bases:

>100_bases
CATGAACCTCGTTGCCGCCGTCATCATGAATTATTAGACGTTGATAAAAAAACCATTAATTTATAAAAGTATTAAAAAAA
CAGGTGTATTTTAAGTTTTT

Downstream 100 bases:

>100_bases
AGACCATCTTTTAATGGTCTTTTTTTATTAATTAAAAACATTATTTGGATGGAGCACGATCAACCAATTTACAAAAGTAA
TAAAAATATGAAAAATTTAT

Product: Cytidine/deoxycytidylate deaminase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MTQNDKNLFFMKAAFQEAYKAYLKKEVPVGAVVVLNNQIIARAHNNRKQKNLFFGHAEFLALIKANKKLKNRRLTNSSVY
VTLEPCLMCAGALIQAGVKHVYYGAADSKTGCIKSLLTSFELPLPHKVIAHSGFLAQESSDLLKTFFQQLRKKDGSKKTK
NTSILL

Sequences:

>Translated_166_residues
MTQNDKNLFFMKAAFQEAYKAYLKKEVPVGAVVVLNNQIIARAHNNRKQKNLFFGHAEFLALIKANKKLKNRRLTNSSVY
VTLEPCLMCAGALIQAGVKHVYYGAADSKTGCIKSLLTSFELPLPHKVIAHSGFLAQESSDLLKTFFQQLRKKDGSKKTK
NTSILL
>Mature_165_residues
TQNDKNLFFMKAAFQEAYKAYLKKEVPVGAVVVLNNQIIARAHNNRKQKNLFFGHAEFLALIKANKKLKNRRLTNSSVYV
TLEPCLMCAGALIQAGVKHVYYGAADSKTGCIKSLLTSFELPLPHKVIAHSGFLAQESSDLLKTFFQQLRKKDGSKKTKN
TSILL

Specific function: Deaminates adenosine-34 to inosine in tRNA-Arg2 [H]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=168, Percent_Identity=31.547619047619, Blast_Score=80, Evalue=6e-16,
Organism=Escherichia coli, GI145693172, Length=156, Percent_Identity=38.4615384615385, Blast_Score=120, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI17541138, Length=156, Percent_Identity=31.4102564102564, Blast_Score=90, Evalue=5e-19,
Organism=Drosophila melanogaster, GI21355527, Length=145, Percent_Identity=32.4137931034483, Blast_Score=78, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 18575; Mature: 18444

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQNDKNLFFMKAAFQEAYKAYLKKEVPVGAVVVLNNQIIARAHNNRKQKNLFFGHAEFL
CCCCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCCHHCEEEHHHHHH
ALIKANKKLKNRRLTNSSVYVTLEPCLMCAGALIQAGVKHVYYGAADSKTGCIKSLLTSF
HHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHC
ELPLPHKVIAHSGFLAQESSDLLKTFFQQLRKKDGSKKTKNTSILL
CCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEECC
>Mature Secondary Structure 
TQNDKNLFFMKAAFQEAYKAYLKKEVPVGAVVVLNNQIIARAHNNRKQKNLFFGHAEFL
CCCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCCHHCEEEHHHHHH
ALIKANKKLKNRRLTNSSVYVTLEPCLMCAGALIQAGVKHVYYGAADSKTGCIKSLLTSF
HHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHC
ELPLPHKVIAHSGFLAQESSDLLKTFFQQLRKKDGSKKTKNTSILL
CCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1698458; 7584024; 9384377 [H]