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The map label for this gene is nusG [H]

Identifier: 197294704

GI number: 197294704

Start: 671431

End: 672045

Strand: Reverse

Name: nusG [H]

Synonym: PAa_0670

Alternate gene names: 197294704

Gene position: 672045-671431 (Counterclockwise)

Preceding gene: 197294705

Following gene: 197294703

Centisome position: 76.37

GC content: 30.89

Gene sequence:

>615_bases
TTGATCCATATGAAAAAAGAAAAAGCAAAGACAATTGATCAAAAAACAGAAAAACCTCAAGAATTACAAACAGAAGCTCC
TCAATTTAGGTGGTACATTGCTCAGACTTATTTAGGTTATGAAAACACTGTTAAACAAGATTTACTAAGAAGAGTTGAAA
GCCTTGGCATTGGAGAATTAATTTCTAATGTTTTATCCCCTAGAGAAACTTATTATGAAACTCGCGCAGATGGAAAAAAA
ACTTCTAAAGAAAGAAATTTATATCCAGGATATGTTTTTATTGAGATGATTATTACTGATCATTCTTGGTTTGTAGTTAA
AAATACTCCAAGGATAACCGGTTTTTTAGGTTCTAGCGGGATGAGTTCTAAACCTATTCCTTTATCCGAAAAAGAAATTA
ATCCGGTTTTGTTTAAAATGGGCATCATGAGTAAACCAAATTATGACCATTTAATTGGTAAAAAAGTAGAAATTATTTCT
GGTTCTTTAGCCAACCAACAAGCCAAAGTTTCCATTATAGATAATGACCGAGAAAAAATAATTGTAGAAGTGGATTTGTT
TGGTAGGACAGTTCCAGTTGAAATCTCATTTAGTGATTTTAAAGAAATATCTTGA

Upstream 100 bases:

>100_bases
TTTTCAACACCCTTCAAGTAATTTTTTTCACTTCCTTTTTGGTTGTATCTATTTGGTCTTTTGGGTTTATTATAGATAAA
TTATTAAGTTACAAATTTAG

Downstream 100 bases:

>100_bases
TTTTCTTTTGTTAAATCATTTTAAATTATTTGTTAATTAATAATAATTAAAATAACGCAAAAATAATAAAAAAATTTATT
TTACCGTTTATTTTTATAAA

Product: Transcription antitermination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MIHMKKEKAKTIDQKTEKPQELQTEAPQFRWYIAQTYLGYENTVKQDLLRRVESLGIGELISNVLSPRETYYETRADGKK
TSKERNLYPGYVFIEMIITDHSWFVVKNTPRITGFLGSSGMSSKPIPLSEKEINPVLFKMGIMSKPNYDHLIGKKVEIIS
GSLANQQAKVSIIDNDREKIIVEVDLFGRTVPVEISFSDFKEIS

Sequences:

>Translated_204_residues
MIHMKKEKAKTIDQKTEKPQELQTEAPQFRWYIAQTYLGYENTVKQDLLRRVESLGIGELISNVLSPRETYYETRADGKK
TSKERNLYPGYVFIEMIITDHSWFVVKNTPRITGFLGSSGMSSKPIPLSEKEINPVLFKMGIMSKPNYDHLIGKKVEIIS
GSLANQQAKVSIIDNDREKIIVEVDLFGRTVPVEISFSDFKEIS
>Mature_204_residues
MIHMKKEKAKTIDQKTEKPQELQTEAPQFRWYIAQTYLGYENTVKQDLLRRVESLGIGELISNVLSPRETYYETRADGKK
TSKERNLYPGYVFIEMIITDHSWFVVKNTPRITGFLGSSGMSSKPIPLSEKEINPVLFKMGIMSKPNYDHLIGKKVEIIS
GSLANQQAKVSIIDNDREKIIVEVDLFGRTVPVEISFSDFKEIS

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=178, Percent_Identity=33.7078651685393, Blast_Score=122, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 23364; Mature: 23364

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHMKKEKAKTIDQKTEKPQELQTEAPQFRWYIAQTYLGYENTVKQDLLRRVESLGIGEL
CCCCCHHHHHHHHHHCCCCHHHHHCCCHHEEEEEHHHCCCHHHHHHHHHHHHHHCCHHHH
ISNVLSPRETYYETRADGKKTSKERNLYPGYVFIEMIITDHSWFVVKNTPRITGFLGSSG
HHHHHCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEECCCCEEEEECCCC
MSSKPIPLSEKEINPVLFKMGIMSKPNYDHLIGKKVEIISGSLANQQAKVSIIDNDREKI
CCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHCCEEEEEECCCCCCCEEEEEEECCCEEE
IVEVDLFGRTVPVEISFSDFKEIS
EEEEEECCCEEEEEEEHHHHCCCC
>Mature Secondary Structure
MIHMKKEKAKTIDQKTEKPQELQTEAPQFRWYIAQTYLGYENTVKQDLLRRVESLGIGEL
CCCCCHHHHHHHHHHCCCCHHHHHCCCHHEEEEEHHHCCCHHHHHHHHHHHHHHCCHHHH
ISNVLSPRETYYETRADGKKTSKERNLYPGYVFIEMIITDHSWFVVKNTPRITGFLGSSG
HHHHHCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEECCCCEEEEECCCC
MSSKPIPLSEKEINPVLFKMGIMSKPNYDHLIGKKVEIISGSLANQQAKVSIIDNDREKI
CCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHCCEEEEEECCCCCCCEEEEEEECCCEEE
IVEVDLFGRTVPVEISFSDFKEIS
EEEEEECCCEEEEEEEHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA