| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is secE
Identifier: 197294705
GI number: 197294705
Start: 672042
End: 672452
Strand: Reverse
Name: secE
Synonym: PAa_0671
Alternate gene names: NA
Gene position: 672452-672042 (Counterclockwise)
Preceding gene: 197294706
Following gene: 197294704
Centisome position: 76.42
GC content: 28.71
Gene sequence:
>411_bases ATGGGAATTAAAGTAATTAACGAAAATAAACCAAATCAATTATTAGGCGTTATTCGCAGAAATTATAGTTTTTTTAATGT TTTTTTAATTTTCATATCTCTTTTGTCTTGTGGATTATACGGAGAATTGATAAATTTGCCCAACAGAGAAACGCAACCAT TTTCCGGTCACCCTCGTATTAATTTGGTTTTTCAAGCTTCATTGTTATTTTTTATTGTGGTCGCTCTTTTTGTGAATGCT TTTCGTTTTTTGAAAGACGCTTTTTTGCAAATTAATCAAATCAGTTTCCCTTCTTTAAGACAAGCTTTTTTCAACACCCT TCAAGTAATTTTTTTCACTTCCTTTTTGGTTGTATCTATTTGGTCTTTTGGGTTTATTATAGATAAATTATTAAGTTACA AATTTAGTTGA
Upstream 100 bases:
>100_bases AATTGCAACCACTCGCAACGTTTAAATTTGAAAAAATATTGCTCTTATTGTAATAAACATACTTTGCATCAAGAAACTAA GTAAAGGAGTTTTTTAGTTT
Downstream 100 bases:
>100_bases TCCATATGAAAAAAGAAAAAGCAAAGACAATTGATCAAAAAACAGAAAAACCTCAAGAATTACAAACAGAAGCTCCTCAA TTTAGGTGGTACATTGCTCA
Product: preprotein translocase subunit SecE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MGIKVINENKPNQLLGVIRRNYSFFNVFLIFISLLSCGLYGELINLPNRETQPFSGHPRINLVFQASLLFFIVVALFVNA FRFLKDAFLQINQISFPSLRQAFFNTLQVIFFTSFLVVSIWSFGFIIDKLLSYKFS
Sequences:
>Translated_136_residues MGIKVINENKPNQLLGVIRRNYSFFNVFLIFISLLSCGLYGELINLPNRETQPFSGHPRINLVFQASLLFFIVVALFVNA FRFLKDAFLQINQISFPSLRQAFFNTLQVIFFTSFLVVSIWSFGFIIDKLLSYKFS >Mature_135_residues GIKVINENKPNQLLGVIRRNYSFFNVFLIFISLLSCGLYGELINLPNRETQPFSGHPRINLVFQASLLFFIVVALFVNAF RFLKDAFLQINQISFPSLRQAFFNTLQVIFFTSFLVVSIWSFGFIIDKLLSYKFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15761; Mature: 15630
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIKVINENKPNQLLGVIRRNYSFFNVFLIFISLLSCGLYGELINLPNRETQPFSGHPRI CCCEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE NLVFQASLLFFIVVALFVNAFRFLKDAFLQINQISFPSLRQAFFNTLQVIFFTSFLVVSI EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH WSFGFIIDKLLSYKFS HHHHHHHHHHHHHCCC >Mature Secondary Structure GIKVINENKPNQLLGVIRRNYSFFNVFLIFISLLSCGLYGELINLPNRETQPFSGHPRI CCEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE NLVFQASLLFFIVVALFVNAFRFLKDAFLQINQISFPSLRQAFFNTLQVIFFTSFLVVSI EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH WSFGFIIDKLLSYKFS HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA