| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294678
Identifier: 197294678
GI number: 197294678
Start: 635328
End: 636074
Strand: Reverse
Name: 197294678
Synonym: PAa_0636
Alternate gene names: NA
Gene position: 636074-635328 (Counterclockwise)
Preceding gene: 197294679
Following gene: 197294677
Centisome position: 72.28
GC content: 26.1
Gene sequence:
>747_bases GTGCAATTTTTGTCAAGTTTATGGGATATAGTAAGACAATTTAATTTTTTTATTACTTATATTAGTGGTTTTGTTAGTGG TTTGGTTTTTGCTTTTTTTATATATTTCTTTTTGGCTTTGCGCAGAATCGAAAAAGATTTTGCTAAAGGAAGGCCAGCAA AAAAAGACGTTAACCGAGATACTATTATCGAATTAATTGATGCCAAAGGAAAAGATTTTAAAGCTAAAATAAAAAAAGAT AAAGATAATTTTGGCAATCTTTTGCTTGCATCATTAAAAGAACTAACTTTAGAAATTCCTAAACATTTTTATCCCGACTC CAAATATCCTTATTTAGAGCTAACTATTGAAGAAAGTTTAATTTTAATGCTTTACATTAACAAACGAATTGACAATATTT TTCAAAATAAAATTTTAAGAATATTTCGCAAAATGACTTTAAAAAGAATTTTTGTCATCAGGGGAGCAATCGTTAAGAAA AATATTGTTCAAAAATACCAGAAAACTAAAAAAGTTGTCAATACTTTTGGTAATGTCAAAAACTTCCTGAATCCCTTTCA TTGGATTAAAAAATTAGTTTTTGATAAACCTTTGGAATTGATTTTTATTCAAATAGGTGTTTCTTTGATCTCTATTACAG GAGAAGAATTTTACAAAATTTATAGCAAGAAGATTTTTGAACCTGAAAATGACGTTGAACAAGATTTAAAAAAAGTTTTG GAATCTCTTTCTGATGATACAAATTAA
Upstream 100 bases:
>100_bases TTAGTTTTAACTTTTTATTTTTTTGAAAACGATTTTTGTTATATAATGAAAATAGTTGTTAGAAAAAATTAATTAAAAGA AATAAAGGATATAAAATATT
Downstream 100 bases:
>100_bases AATTTTATTTTTAAAAAATAGGAATAAACAAATAAAAACATTTCATTGGCTTTTTTTATATATAAATTTAAAATGTTTCC AATTTAAATATATCAACCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MQFLSSLWDIVRQFNFFITYISGFVSGLVFAFFIYFFLALRRIEKDFAKGRPAKKDVNRDTIIELIDAKGKDFKAKIKKD KDNFGNLLLASLKELTLEIPKHFYPDSKYPYLELTIEESLILMLYINKRIDNIFQNKILRIFRKMTLKRIFVIRGAIVKK NIVQKYQKTKKVVNTFGNVKNFLNPFHWIKKLVFDKPLELIFIQIGVSLISITGEEFYKIYSKKIFEPENDVEQDLKKVL ESLSDDTN
Sequences:
>Translated_248_residues MQFLSSLWDIVRQFNFFITYISGFVSGLVFAFFIYFFLALRRIEKDFAKGRPAKKDVNRDTIIELIDAKGKDFKAKIKKD KDNFGNLLLASLKELTLEIPKHFYPDSKYPYLELTIEESLILMLYINKRIDNIFQNKILRIFRKMTLKRIFVIRGAIVKK NIVQKYQKTKKVVNTFGNVKNFLNPFHWIKKLVFDKPLELIFIQIGVSLISITGEEFYKIYSKKIFEPENDVEQDLKKVL ESLSDDTN >Mature_248_residues MQFLSSLWDIVRQFNFFITYISGFVSGLVFAFFIYFFLALRRIEKDFAKGRPAKKDVNRDTIIELIDAKGKDFKAKIKKD KDNFGNLLLASLKELTLEIPKHFYPDSKYPYLELTIEESLILMLYINKRIDNIFQNKILRIFRKMTLKRIFVIRGAIVKK NIVQKYQKTKKVVNTFGNVKNFLNPFHWIKKLVFDKPLELIFIQIGVSLISITGEEFYKIYSKKIFEPENDVEQDLKKVL ESLSDDTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29321; Mature: 29321
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFLSSLWDIVRQFNFFITYISGFVSGLVFAFFIYFFLALRRIEKDFAKGRPAKKDVNRD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH TIIELIDAKGKDFKAKIKKDKDNFGNLLLASLKELTLEIPKHFYPDSKYPYLELTIEESL HHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHH ILMLYINKRIDNIFQNKILRIFRKMTLKRIFVIRGAIVKKNIVQKYQKTKKVVNTFGNVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NFLNPFHWIKKLVFDKPLELIFIQIGVSLISITGEEFYKIYSKKIFEPENDVEQDLKKVL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ESLSDDTN HHHCCCCC >Mature Secondary Structure MQFLSSLWDIVRQFNFFITYISGFVSGLVFAFFIYFFLALRRIEKDFAKGRPAKKDVNRD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH TIIELIDAKGKDFKAKIKKDKDNFGNLLLASLKELTLEIPKHFYPDSKYPYLELTIEESL HHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHH ILMLYINKRIDNIFQNKILRIFRKMTLKRIFVIRGAIVKKNIVQKYQKTKKVVNTFGNVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NFLNPFHWIKKLVFDKPLELIFIQIGVSLISITGEEFYKIYSKKIFEPENDVEQDLKKVL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ESLSDDTN HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA