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The map label for this gene is rbgA [H]

Identifier: 197294677

GI number: 197294677

Start: 634038

End: 634925

Strand: Reverse

Name: rbgA [H]

Synonym: PAa_0635

Alternate gene names: 197294677

Gene position: 634925-634038 (Counterclockwise)

Preceding gene: 197294678

Following gene: 197294676

Centisome position: 72.15

GC content: 25.34

Gene sequence:

>888_bases
ATGAAAACATTCAATTGGTTCCCCGGTCATATGAAAAAAGCTTTTGATCAAATTAAAAATAATTTGTTTTTGGTTGATAT
AGTTTTCATGATTTTAGATGCAAGAATTCCCTTTTCTAGCATTAATTTTAAAGTTTTGTCTTTGATTCAACAACGCCACA
AACCTTTTTTATTTTTATTAAATAAAAGTTCTTTAGCTGATAATCATAAAACAACTCATTTTACCAAATATTATTTGAAA
AAAGCAATATCTTCCTTATCGATTGATGTTATCCAACAAAATCCAAAATTTTTTCTATATGAACAAGCAATCAAAAAAAT
CCAATCTCAAAAAAATAATTTTTCGAACAAAGCCAACATTAAAATAATGATAGTAGGGATGCCAAATGTTGGCAAATCAA
CTTTAATTAATAGTTTTGCTAGTAAAAAAGTTTTAAAAACTGCTAATTTGGCTGGCACTACCATCAAAAATCAATGGATT
AAAATTTTAAGCCCTAATATTCAATTTTTAGATACTCCAGGAATTTTATCTCATAACGTTGATGAAACAAAAATTAACTT
AAGTTTAGCATTAACTGGTTGCTTCAAAGATTCAACTTTGGCTTTAGATCAAATAGGAAAACATACGTTAAATTATTTAC
AAAAACATTATTTTAACAGTTTGAAAAAAAGATTTAATTTAGGAATTGATTCGCGCGCAGATGATCTTGTGGAATTTATT
GGTGAAAAAAGAAAAATTTATACTAAAAATCAACAAATTGATCGGAATAAAGTTTATCAAATGATTTTAAAAGAAACAAG
AGAAGGTAGATTAGGAAAAATGAATTTTGATTTAGATATTTTGCCTTCTTTAGATGATTTTTTTCAAAAACAGATGAAAT
TAAGTTAA

Upstream 100 bases:

>100_bases
TTGCCATTGTTTTGAAATCAAAAAAACGAAAAGTTTCTAAATCTTTTATTAATATTAAAAATAATTAGACTTTTATTTTA
AAAAAAGCAGGAATAAACAA

Downstream 100 bases:

>100_bases
ATACTTTTACGAGGAATTAAATGAAAAAAAAAGTTATTATAGTTGAGTCTCCTGCCAAAATTAAAACATTAAGCCGTTTT
TTTGATGATAAAGTGGAAAT

Product: GTPase of unknown function

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MKTFNWFPGHMKKAFDQIKNNLFLVDIVFMILDARIPFSSINFKVLSLIQQRHKPFLFLLNKSSLADNHKTTHFTKYYLK
KAISSLSIDVIQQNPKFFLYEQAIKKIQSQKNNFSNKANIKIMIVGMPNVGKSTLINSFASKKVLKTANLAGTTIKNQWI
KILSPNIQFLDTPGILSHNVDETKINLSLALTGCFKDSTLALDQIGKHTLNYLQKHYFNSLKKRFNLGIDSRADDLVEFI
GEKRKIYTKNQQIDRNKVYQMILKETREGRLGKMNFDLDILPSLDDFFQKQMKLS

Sequences:

>Translated_295_residues
MKTFNWFPGHMKKAFDQIKNNLFLVDIVFMILDARIPFSSINFKVLSLIQQRHKPFLFLLNKSSLADNHKTTHFTKYYLK
KAISSLSIDVIQQNPKFFLYEQAIKKIQSQKNNFSNKANIKIMIVGMPNVGKSTLINSFASKKVLKTANLAGTTIKNQWI
KILSPNIQFLDTPGILSHNVDETKINLSLALTGCFKDSTLALDQIGKHTLNYLQKHYFNSLKKRFNLGIDSRADDLVEFI
GEKRKIYTKNQQIDRNKVYQMILKETREGRLGKMNFDLDILPSLDDFFQKQMKLS
>Mature_295_residues
MKTFNWFPGHMKKAFDQIKNNLFLVDIVFMILDARIPFSSINFKVLSLIQQRHKPFLFLLNKSSLADNHKTTHFTKYYLK
KAISSLSIDVIQQNPKFFLYEQAIKKIQSQKNNFSNKANIKIMIVGMPNVGKSTLINSFASKKVLKTANLAGTTIKNQWI
KILSPNIQFLDTPGILSHNVDETKINLSLALTGCFKDSTLALDQIGKHTLNYLQKHYFNSLKKRFNLGIDSRADDLVEFI
GEKRKIYTKNQQIDRNKVYQMILKETREGRLGKMNFDLDILPSLDDFFQKQMKLS

Specific function: Binds GTP and GDP [H]

COG id: COG1161

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI93277113, Length=306, Percent_Identity=29.0849673202614, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI7019419, Length=267, Percent_Identity=25.0936329588015, Blast_Score=69, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI193211047, Length=227, Percent_Identity=29.0748898678414, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17534827, Length=192, Percent_Identity=26.5625, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6320842, Length=194, Percent_Identity=30.9278350515464, Blast_Score=67, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6324381, Length=265, Percent_Identity=21.5094339622642, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI85815858, Length=309, Percent_Identity=28.1553398058252, Blast_Score=103, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023179
- InterPro:   IPR019991
- InterPro:   IPR016478
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 34133; Mature: 34133

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFNWFPGHMKKAFDQIKNNLFLVDIVFMILDARIPFSSINFKVLSLIQQRHKPFLFLL
CCCCCCCCHHHHHHHHHHHCCEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEE
NKSSLADNHKTTHFTKYYLKKAISSLSIDVIQQNPKFFLYEQAIKKIQSQKNNFSNKANI
ECCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCEEHHHHHHHHHHHHHCCCCCCCCE
KIMIVGMPNVGKSTLINSFASKKVLKTANLAGTTIKNQWIKILSPNIQFLDTPGILSHNV
EEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEEECCCCEEEECCCCCCCCC
DETKINLSLALTGCFKDSTLALDQIGKHTLNYLQKHYFNSLKKRFNLGIDSRADDLVEFI
CCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
GEKRKIYTKNQQIDRNKVYQMILKETREGRLGKMNFDLDILPSLDDFFQKQMKLS
CCCCEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCCEEECCCHHHHHHHHHCCC
>Mature Secondary Structure
MKTFNWFPGHMKKAFDQIKNNLFLVDIVFMILDARIPFSSINFKVLSLIQQRHKPFLFLL
CCCCCCCCHHHHHHHHHHHCCEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEE
NKSSLADNHKTTHFTKYYLKKAISSLSIDVIQQNPKFFLYEQAIKKIQSQKNNFSNKANI
ECCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCEEHHHHHHHHHHHHHCCCCCCCCE
KIMIVGMPNVGKSTLINSFASKKVLKTANLAGTTIKNQWIKILSPNIQFLDTPGILSHNV
EEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEEECCCCEEEECCCCCCCCC
DETKINLSLALTGCFKDSTLALDQIGKHTLNYLQKHYFNSLKKRFNLGIDSRADDLVEFI
CCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
GEKRKIYTKNQQIDRNKVYQMILKETREGRLGKMNFDLDILPSLDDFFQKQMKLS
CCCCEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCCEEECCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]