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The map label for this gene is iscU [H]

Identifier: 197294588

GI number: 197294588

Start: 552177

End: 552620

Strand: Reverse

Name: iscU [H]

Synonym: PAa_0544

Alternate gene names: 197294588

Gene position: 552620-552177 (Counterclockwise)

Preceding gene: 197294589

Following gene: 197294580

Centisome position: 62.8

GC content: 25.0

Gene sequence:

>444_bases
ATGTTAGAAATAAATAAATTATATCGCGATATAATTATGAAACATTATCAAGAACCTCAAAATTGGGGTTTATCACAAGA
CAAAAGCTTTATTTCTTTGACTCATAAAAATATTTCTTGCGGAGACTCTATTGTTTTACAAATTAAGTTTGGCGGCCAAA
AAGCCAATCAAAAGATAGAAGATATTAAATATAAAACTCAATCTTGTGCTATTTGTCGCGCATCAGCTAGCTTAATGTCA
CTTTATTTAAAAAATTTAGAAATTAATCAATGTTTAAACAAAATAAATACTTTTTTAGCTATGATTAATAATCAAGATTT
AGATGAAACAAAAATAGAAAAAGAATTATTATTATTTAAACATTTTTGTCAATTTCAAGGAAGAAGAGTTTGTGTTGCTC
TTCCTTGGCAAGCTTTAGAAAAAATAATTCAAAAAAATAGATAA

Upstream 100 bases:

>100_bases
GTGTTTATAATAATCAAGAAGATATTGATATTTTAATTAAAAATTTAAAAAAAGCACGAGATTTTTTTATAAAATGTGCT
AAAAAGTAAAAGGTTTTAAA

Downstream 100 bases:

>100_bases
TAGATAGAATAAAACTACCTCGAAAGGTAGTTTTATTTTTTTATTTTTTAAAAAAATGTGATTATTTTTTTATATTTCAT
CAATTTTTTGGACATTTACT

Product: NifU homolog

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MLEINKLYRDIIMKHYQEPQNWGLSQDKSFISLTHKNISCGDSIVLQIKFGGQKANQKIEDIKYKTQSCAICRASASLMS
LYLKNLEINQCLNKINTFLAMINNQDLDETKIEKELLLFKHFCQFQGRRVCVALPWQALEKIIQKNR

Sequences:

>Translated_147_residues
MLEINKLYRDIIMKHYQEPQNWGLSQDKSFISLTHKNISCGDSIVLQIKFGGQKANQKIEDIKYKTQSCAICRASASLMS
LYLKNLEINQCLNKINTFLAMINNQDLDETKIEKELLLFKHFCQFQGRRVCVALPWQALEKIIQKNR
>Mature_147_residues
MLEINKLYRDIIMKHYQEPQNWGLSQDKSFISLTHKNISCGDSIVLQIKFGGQKANQKIEDIKYKTQSCAICRASASLMS
LYLKNLEINQCLNKINTFLAMINNQDLDETKIEKELLLFKHFCQFQGRRVCVALPWQALEKIIQKNR

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871
- InterPro:   IPR011341 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 17154; Mature: 17154

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEINKLYRDIIMKHYQEPQNWGLSQDKSFISLTHKNISCGDSIVLQIKFGGQKANQKIE
CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEECCCCCCCCEEEEEEEECCCCHHHHHH
DIKYKTQSCAICRASASLMSLYLKNLEINQCLNKINTFLAMINNQDLDETKIEKELLLFK
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
HFCQFQGRRVCVALPWQALEKIIQKNR
HHHHHCCCEEEEECCHHHHHHHHHCCC
>Mature Secondary Structure
MLEINKLYRDIIMKHYQEPQNWGLSQDKSFISLTHKNISCGDSIVLQIKFGGQKANQKIE
CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEECCCCCCCCEEEEEEEECCCCHHHHHH
DIKYKTQSCAICRASASLMSLYLKNLEINQCLNKINTFLAMINNQDLDETKIEKELLLFK
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
HFCQFQGRRVCVALPWQALEKIIQKNR
HHHHHCCCEEEEECCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]