| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is dut [H]
Identifier: 197294565
GI number: 197294565
Start: 512973
End: 513434
Strand: Reverse
Name: dut [H]
Synonym: PAa_0520
Alternate gene names: 197294565
Gene position: 513434-512973 (Counterclockwise)
Preceding gene: 197294566
Following gene: 197294564
Centisome position: 58.35
GC content: 30.74
Gene sequence:
>462_bases ATGTCTCAAAAAAAAAGGTTTTTTGAAAAAATAACCCTTTATCAAACCGAAAATATTAATCTTCCTCAAAGACAAACCGA AAAAAGTGGAGGATATGATTTTGAAGCAGCCCAAAATATAGAAATAAAACCACAAACAGTTCAATTAGTTCCTACAGGAA TTAAGGCTTTTTTTTCTGAAAACGAAACACTCTTGATTTATGCAAGGTCATCTTTGGCTTTGAAAAAACAATTAATGATG GCAAACGGTGTTGGAGTGGTTGATAGCGATTATTATAATAATTTGCAAAATGAAGGTCATATTTTTATCCCCTTATATAA TTTTTCTTCTCAAACTGTTAAAATTGAAAAGGGAGAAAGAATAGCCCAAGGGATTTTTCAACCTTTTTTATTAAGCACAA ATGAAGAAAAACCTTCTTTTTTAAGAAAAGGCGGCTTTGGTAGCACCACTAAAAACAACTAA
Upstream 100 bases:
>100_bases TAATAATGGAATTAATTTTTTGCAGCAAAAGTAAATATCTGGATGATGAAAAACGCATCAATTTTGATTTTAAAAAATAA GAAAGGAGTTTTTTAATTTT
Downstream 100 bases:
>100_bases AAAAGTTATTAATATAACAAATTATTTGCTAAATAGTTTGAAATATGCTAAAATAATTTAGGCAAAAAAATCTCTTTTAT TTGTTTTTCTTTTCTTAATT
Product: DeoxyUTP pyrophosphatase
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MSQKKRFFEKITLYQTENINLPQRQTEKSGGYDFEAAQNIEIKPQTVQLVPTGIKAFFSENETLLIYARSSLALKKQLMM ANGVGVVDSDYYNNLQNEGHIFIPLYNFSSQTVKIEKGERIAQGIFQPFLLSTNEEKPSFLRKGGFGSTTKNN
Sequences:
>Translated_153_residues MSQKKRFFEKITLYQTENINLPQRQTEKSGGYDFEAAQNIEIKPQTVQLVPTGIKAFFSENETLLIYARSSLALKKQLMM ANGVGVVDSDYYNNLQNEGHIFIPLYNFSSQTVKIEKGERIAQGIFQPFLLSTNEEKPSFLRKGGFGSTTKNN >Mature_152_residues SQKKRFFEKITLYQTENINLPQRQTEKSGGYDFEAAQNIEIKPQTVQLVPTGIKAFFSENETLLIYARSSLALKKQLMMA NGVGVVDSDYYNNLQNEGHIFIPLYNFSSQTVKIEKGERIAQGIFQPFLLSTNEEKPSFLRKGGFGSTTKNN
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family [H]
Homologues:
Organism=Homo sapiens, GI70906444, Length=141, Percent_Identity=31.2056737588652, Blast_Score=65, Evalue=3e-11, Organism=Homo sapiens, GI4503423, Length=141, Percent_Identity=31.2056737588652, Blast_Score=64, Evalue=4e-11, Organism=Homo sapiens, GI70906441, Length=141, Percent_Identity=31.2056737588652, Blast_Score=63, Evalue=9e-11, Organism=Escherichia coli, GI1790071, Length=113, Percent_Identity=34.5132743362832, Blast_Score=69, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 17383; Mature: 17252
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKKRFFEKITLYQTENINLPQRQTEKSGGYDFEAAQNIEIKPQTVQLVPTGIKAFFSE CCHHHHHHHHHHEEECCCCCCCHHHHHCCCCCCCCCCCCCEECCCEEEEEECCHHHHHCC NETLLIYARSSLALKKQLMMANGVGVVDSDYYNNLQNEGHIFIPLYNFSSQTVKIEKGER CCEEEEEECCCHHHHHHHHHHCCCCEECCHHHHCCCCCCEEEEEEECCCCCEEEEECCCH IAQGIFQPFLLSTNEEKPSFLRKGGFGSTTKNN HHHHHHHHHEECCCCCCCHHHHCCCCCCCCCCC >Mature Secondary Structure SQKKRFFEKITLYQTENINLPQRQTEKSGGYDFEAAQNIEIKPQTVQLVPTGIKAFFSE CHHHHHHHHHHEEECCCCCCCHHHHHCCCCCCCCCCCCCEECCCEEEEEECCHHHHHCC NETLLIYARSSLALKKQLMMANGVGVVDSDYYNNLQNEGHIFIPLYNFSSQTVKIEKGER CCEEEEEECCCHHHHHHHHHHCCCCEECCHHHHCCCCCCEEEEEEECCCCCEEEEECCCH IAQGIFQPFLLSTNEEKPSFLRKGGFGSTTKNN HHHHHHHHHEECCCCCCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11337471 [H]