| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is smtA [H]
Identifier: 197294552
GI number: 197294552
Start: 499566
End: 500165
Strand: Reverse
Name: smtA [H]
Synonym: PAa_0507
Alternate gene names: 197294552
Gene position: 500165-499566 (Counterclockwise)
Preceding gene: 197294553
Following gene: 197294551
Centisome position: 56.84
GC content: 23.17
Gene sequence:
>600_bases ATGATGTTTCATAAAGAAAAATATTTGCAAAAATTAAAAAAATACGCCCAAGAAAACAATATCCCTATAATCAAAAATAA AAGCCTAGATTTTTTACTCCAAATAATTAACCAATTTAAAATACAAAATATTTTAGAAATAGGAACCGCTATTGGTTATA GCACTTTGTCGATGAGTTTTGAAAACACTCAAATAGATACTTTGGAAAGAGATTATCTGAATTATCATTTAGCTAAAAAC TTTCTTCAAAAAACTCCTTTTAAAATCAATGTCATTTGGACAGAAGCCTTAATTTATCCAATCAATAAATTAAAAAAATA TGATTTGATTTTTATTGATGCTGCAAAAGCTCAATATAAAAAAATATTTGTTAAATTTTGTTCTTTACTTAATCCTCAAG GGATAATTATTTGTGATAATTTGCATTTAAGTTGTTTTCGAAATGAAAAAAACACTGCAAAACAAAAAGGTATTTTCAAA AAAATGCAGGATTTCGAAATATTTTTGCAAAACCATCCAGATTTTCAAACTGTTTTTAAAAATATTGATGATGGTTTAAG TATTTCTTATAAAATAACAGATAAAATAAAAATAAATTAA
Upstream 100 bases:
>100_bases TTAAGACAAAATAACAAAAAGAAAAAGAAAATAAAAACACTTAAAGATGTCATTGCAGCTACTATTATTTTACAAAATTA TCTAGATTTTAAAGAGATCA
Downstream 100 bases:
>100_bases AAGAAAAGGTTTTTTATGAAAAATAAAATTTATGAACTAACCCAACCAGGAATTTTAAAATTAAAAAAAGAATTGACTTT TTTAAAAGAAGTTAAAAGAA
Product: SAM-dependent methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MMFHKEKYLQKLKKYAQENNIPIIKNKSLDFLLQIINQFKIQNILEIGTAIGYSTLSMSFENTQIDTLERDYLNYHLAKN FLQKTPFKINVIWTEALIYPINKLKKYDLIFIDAAKAQYKKIFVKFCSLLNPQGIIICDNLHLSCFRNEKNTAKQKGIFK KMQDFEIFLQNHPDFQTVFKNIDDGLSISYKITDKIKIN
Sequences:
>Translated_199_residues MMFHKEKYLQKLKKYAQENNIPIIKNKSLDFLLQIINQFKIQNILEIGTAIGYSTLSMSFENTQIDTLERDYLNYHLAKN FLQKTPFKINVIWTEALIYPINKLKKYDLIFIDAAKAQYKKIFVKFCSLLNPQGIIICDNLHLSCFRNEKNTAKQKGIFK KMQDFEIFLQNHPDFQTVFKNIDDGLSISYKITDKIKIN >Mature_199_residues MMFHKEKYLQKLKKYAQENNIPIIKNKSLDFLLQIINQFKIQNILEIGTAIGYSTLSMSFENTQIDTLERDYLNYHLAKN FLQKTPFKINVIWTEALIYPINKLKKYDLIFIDAAKAQYKKIFVKFCSLLNPQGIIICDNLHLSCFRNEKNTAKQKGIFK KMQDFEIFLQNHPDFQTVFKNIDDGLSISYKITDKIKIN
Specific function: Unknown
COG id: COG4122
COG function: function code R; Predicted O-methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. Type 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002935 [H]
Pfam domain/function: PF01596 Methyltransf_3 [H]
EC number: NA
Molecular weight: Translated: 23503; Mature: 23503
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMFHKEKYLQKLKKYAQENNIPIIKNKSLDFLLQIINQFKIQNILEIGTAIGYSTLSMSF CCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEE ENTQIDTLERDYLNYHLAKNFLQKTPFKINVIWTEALIYPINKLKKYDLIFIDAAKAQYK CCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHCCCEEEEEEECCHHHHH KIFVKFCSLLNPQGIIICDNLHLSCFRNEKNTAKQKGIFKKMQDFEIFLQNHPDFQTVFK HHHHHHHHHCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH NIDDGLSISYKITDKIKIN CCCCCCEEEEEEEEEEEEC >Mature Secondary Structure MMFHKEKYLQKLKKYAQENNIPIIKNKSLDFLLQIINQFKIQNILEIGTAIGYSTLSMSF CCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEE ENTQIDTLERDYLNYHLAKNFLQKTPFKINVIWTEALIYPINKLKKYDLIFIDAAKAQYK CCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHCCCEEEEEEECCHHHHH KIFVKFCSLLNPQGIIICDNLHLSCFRNEKNTAKQKGIFKKMQDFEIFLQNHPDFQTVFK HHHHHHHHHCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH NIDDGLSISYKITDKIKIN CCCCCCEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]