| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is yqeK [H]
Identifier: 197294549
GI number: 197294549
Start: 497956
End: 498534
Strand: Reverse
Name: yqeK [H]
Synonym: PAa_0504
Alternate gene names: 197294549
Gene position: 498534-497956 (Counterclockwise)
Preceding gene: 197294550
Following gene: 197294548
Centisome position: 56.65
GC content: 25.73
Gene sequence:
>579_bases ATGTTATTAATCAAAATTCGCCAAGCTGTTGAAAATAAATTAAAAAATCATCCATTACGTTTATCCCATTCTTTAAGAGT TTATCGAACTGCTACCAAAATGGCAAGGCACTATAAAAAACCCTTGTTACCTATTCAAATTGCTGCTTTGTTTCATGATT ATAATAAAAATGATTCTTTAGAAGAGCAAAGAATTTACTTAAATAAAGCAAGCATCACCAAATATCAAGATACACCAGCC ATTTTTCATGCCTTATCAGCAGCTAATTGCTTAAAGCAAAATTTCAATATTAATAATAAAATTATTTTAAATGCCATTAA AAAACATGTTTGGGGTGATGTCAAAATGAATTATTGTGATAAAATTGTTTTTATAAGTGACAAAATTGAGCCTAAAAGAA ATTTTCCTCAAAAATTATATTTTGAAAAATTAGCCTATTTAGATATCCATCGTGCTGCATACGAAATTTTAAAAAATAAT TTCGAATTTTTTCAAAAAAAAGGTTATCCGCTTCCATCTAATTATCAATTAATTCTTGAATCTTTAAAAAAAGACATTAA AAAAAGAAAGATATTATGA
Upstream 100 bases:
>100_bases TTTAATCGCTTTTACAGAGAAAAAAAATTTTTAAAAAAGATAAAAAAAGAAAATTATTCACTATGGAAAAATAAATTTGA ACATTTTGAAAGAAAATAAG
Downstream 100 bases:
>100_bases CAAAAACTACTAAAATCATTAGCGGAAAATATAAAGGTCATAAAATCAAATTAGTGTCATCTCCCAAAACAAAAGCGACT AATTCCTTAGTTAAAGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MLLIKIRQAVENKLKNHPLRLSHSLRVYRTATKMARHYKKPLLPIQIAALFHDYNKNDSLEEQRIYLNKASITKYQDTPA IFHALSAANCLKQNFNINNKIILNAIKKHVWGDVKMNYCDKIVFISDKIEPKRNFPQKLYFEKLAYLDIHRAAYEILKNN FEFFQKKGYPLPSNYQLILESLKKDIKKRKIL
Sequences:
>Translated_192_residues MLLIKIRQAVENKLKNHPLRLSHSLRVYRTATKMARHYKKPLLPIQIAALFHDYNKNDSLEEQRIYLNKASITKYQDTPA IFHALSAANCLKQNFNINNKIILNAIKKHVWGDVKMNYCDKIVFISDKIEPKRNFPQKLYFEKLAYLDIHRAAYEILKNN FEFFQKKGYPLPSNYQLILESLKKDIKKRKIL >Mature_192_residues MLLIKIRQAVENKLKNHPLRLSHSLRVYRTATKMARHYKKPLLPIQIAALFHDYNKNDSLEEQRIYLNKASITKYQDTPA IFHALSAANCLKQNFNINNKIILNAIKKHVWGDVKMNYCDKIVFISDKIEPKRNFPQKLYFEKLAYLDIHRAAYEILKNN FEFFQKKGYPLPSNYQLILESLKKDIKKRKIL
Specific function: Unknown
COG id: COG1713
COG function: function code H; Predicted HD superfamily hydrolase involved in NAD metabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005249 - InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22790; Mature: 22790
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLIKIRQAVENKLKNHPLRLSHSLRVYRTATKMARHYKKPLLPIQIAALFHDYNKNDSL CEEEHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCH EEQRIYLNKASITKYQDTPAIFHALSAANCLKQNFNINNKIILNAIKKHVWGDVKMNYCD HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEECCCC KIVFISDKIEPKRNFPQKLYFEKLAYLDIHRAAYEILKNNFEFFQKKGYPLPSNYQLILE EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH SLKKDIKKRKIL HHHHHHHHHCCC >Mature Secondary Structure MLLIKIRQAVENKLKNHPLRLSHSLRVYRTATKMARHYKKPLLPIQIAALFHDYNKNDSL CEEEHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCH EEQRIYLNKASITKYQDTPAIFHALSAANCLKQNFNINNKIILNAIKKHVWGDVKMNYCD HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEECCCC KIVFISDKIEPKRNFPQKLYFEKLAYLDIHRAAYEILKNNFEFFQKKGYPLPSNYQLILE EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH SLKKDIKKRKIL HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]