| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is yqeG [H]
Identifier: 197294550
GI number: 197294550
Start: 498536
End: 499090
Strand: Reverse
Name: yqeG [H]
Synonym: PAa_0505
Alternate gene names: 197294550
Gene position: 499090-498536 (Counterclockwise)
Preceding gene: 197294551
Following gene: 197294549
Centisome position: 56.72
GC content: 21.62
Gene sequence:
>555_bases ATGTTAAATAAAAAAAAATATATACCTCAATATTATTTCCCTTCAGTTTTCCAAATTCCTTTTGATTTTTTTCAAAAAAA AGGGATTAAAGCTTTGTTTTTTGATTTAGATAACACTTTAGTTGATTGTAAAAAAGATGAATTAGATGAAGACATTAAAA AACTTTTAAATCTAATTTCATCTTCTTTTAAAATAATCATCCTTTCAAACGCTTCCCATAAACGGTTACAAAAAATTTTG AAAAAAAACTTTCATTTCATTTACTTAAATTTATTTATTAAAAAACCTTCCATCATATCATTTCAAAAAGCTTTAAAAGT AGTTAATTTAGAACCTTCTCAAGTAATGATGATAGGTGATCAACTTCATACAGATATTAATGGTTCTAATCATGCAGGAA TTACTTCTTTATTAGTTAGACCATTAAATTATCAAAAAGAAAATTTATGGACTAAATTTAATCGCTTTTACAGAGAAAAA AAATTTTTAAAAAAGATAAAAAAAGAAAATTATTCACTATGGAAAAATAAATTTGAACATTTTGAAAGAAAATAA
Upstream 100 bases:
>100_bases ATTGAATCCCCTTTAGGAAAAAAAATTAAGGGACATGAGATAGGAGATGTTGTCTTTATAACTAGCGAAACGGGTACGAA ATTTAAGGTAAAAATTTTAG
Downstream 100 bases:
>100_bases GATGTTATTAATCAAAATTCGCCAAGCTGTTGAAAATAAATTAAAAAATCATCCATTACGTTTATCCCATTCTTTAAGAG TTTATCGAACTGCTACCAAA
Product: Putative hydrolase of the HAD superfamily
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MLNKKKYIPQYYFPSVFQIPFDFFQKKGIKALFFDLDNTLVDCKKDELDEDIKKLLNLISSSFKIIILSNASHKRLQKIL KKNFHFIYLNLFIKKPSIISFQKALKVVNLEPSQVMMIGDQLHTDINGSNHAGITSLLVRPLNYQKENLWTKFNRFYREK KFLKKIKKENYSLWKNKFEHFERK
Sequences:
>Translated_184_residues MLNKKKYIPQYYFPSVFQIPFDFFQKKGIKALFFDLDNTLVDCKKDELDEDIKKLLNLISSSFKIIILSNASHKRLQKIL KKNFHFIYLNLFIKKPSIISFQKALKVVNLEPSQVMMIGDQLHTDINGSNHAGITSLLVRPLNYQKENLWTKFNRFYREK KFLKKIKKENYSLWKNKFEHFERK >Mature_184_residues MLNKKKYIPQYYFPSVFQIPFDFFQKKGIKALFFDLDNTLVDCKKDELDEDIKKLLNLISSSFKIIILSNASHKRLQKIL KKNFHFIYLNLFIKKPSIISFQKALKVVNLEPSQVMMIGDQLHTDINGSNHAGITSLLVRPLNYQKENLWTKFNRFYREK KFLKKIKKENYSLWKNKFEHFERK
Specific function: Unknown
COG id: COG2179
COG function: function code R; Predicted hydrolase of the HAD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006549 - InterPro: IPR010021 [H]
Pfam domain/function: PF09419 DUF2010 [H]
EC number: NA
Molecular weight: Translated: 22087; Mature: 22087
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNKKKYIPQYYFPSVFQIPFDFFQKKGIKALFFDLDNTLVDCKKDELDEDIKKLLNLIS CCCCCCCCCCHHCCHHHHCCHHHHHHCCCEEEEEECCCHHHHCCHHHHHHHHHHHHHHHC SSFKIIILSNASHKRLQKILKKNFHFIYLNLFIKKPSIISFQKALKVVNLEPSQVMMIGD CCCEEEEECCCCHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEECH QLHTDINGSNHAGITSLLVRPLNYQKENLWTKFNRFYREKKFLKKIKKENYSLWKNKFEH HHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH FERK HCCC >Mature Secondary Structure MLNKKKYIPQYYFPSVFQIPFDFFQKKGIKALFFDLDNTLVDCKKDELDEDIKKLLNLIS CCCCCCCCCCHHCCHHHHCCHHHHHHCCCEEEEEECCCHHHHCCHHHHHHHHHHHHHHHC SSFKIIILSNASHKRLQKILKKNFHFIYLNLFIKKPSIISFQKALKVVNLEPSQVMMIGD CCCEEEEECCCCHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEECH QLHTDINGSNHAGITSLLVRPLNYQKENLWTKFNRFYREKKFLKKIKKENYSLWKNKFEH HHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH FERK HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]