| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294520
Identifier: 197294520
GI number: 197294520
Start: 465707
End: 466708
Strand: Reverse
Name: 197294520
Synonym: PAa_0469
Alternate gene names: NA
Gene position: 466708-465707 (Counterclockwise)
Preceding gene: 197294521
Following gene: 197294519
Centisome position: 53.04
GC content: 18.46
Gene sequence:
>1002_bases ATGTTTAAATTACAAAATCAATTAAAAATAATAAGTATTTGTTTATTAGCTTTTTTAGGAATGTTATTAATAAATAATAA TCAAGTTATGGCAATGGCAATTGTAAAAAATGAAGAAACCATTAGTAAAAACAACAATATGCAAATTCATGGTTTTTATT TAGAAAAAGAAGAAGATATATTAAATTATTTAATAAATAAAAATTGTTATGAATGTTTTAGTTTTTTAACATTGGAATAT CCATGTTATAATGGAGAAAATGTTAAATATGATCTTAATTGTAGAATTAAAAACCCACCTGTGGTGCAATTAGGTTATAA TAACTACAGTTTAATGTGTGTTATATTCGATAAAGGGATTAGAGATAAAAAAGATGATTTTTATTCTTTAGAAAATTTGG AGAAAATGAGTAATGGAGCTTCAAATATGTATATTTTTTGGTTAAAACAACAAACATTCACTTTAAATTCGATAATCGAA AAACAAAAACACATAAAAGATATAAATCAAAGGATATTTTATCGATTAGAAATCGAATTTCAAAAAAACAAAATAGAAAA AATAAAGCATAAATTAAATTTATTACAAAAAGAAAAAAATGATTTAATTAATCAAATAAAAAGTGAAAAAAATTATTTCA AATCCCAATTAGAAACTAAAAAATTAGAAATTTTAAAGATTCAAATACAAAAGGATAATTTAGAAAATAGTCTTAAATTA AAACAACAAGAATTGTTAGATAATCAAAAATTAACCGAAATTGAAAAGACTAATTTAAAAAAAGAAATTAAAAATATTAA AATAAATTTAGATAACGAAATTAAAGAAAATCTAATAAAAAACAAAAAAATCGAAGAACTAAATACTCAATTAAATCTAT TAAACATAAAATTTCAAAATGAAAAAACAAAATATCAACAAATAAAGGAAAATTTAGAAAAAAAACACAATGATTATTTA GGAATTTTTGATTTCTTATATAAAAAAATTTTTCAATTTTAA
Upstream 100 bases:
>100_bases TCTTCACTTCAACCCAAAACAAAAATATATCACACTTTATACTAAGAAATTTAATACAAAAAATAAATAAAATAAATAAA AATAAGGAGTTTGGTAATTA
Downstream 100 bases:
>100_bases AAAAATTGAAATAATTGATTAAAAAAAATTATAAAAATAACATTAATTAAATTATTATTTAAATCACAAACCCTTCAACT AACGATTATTTTGATACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MFKLQNQLKIISICLLAFLGMLLINNNQVMAMAIVKNEETISKNNNMQIHGFYLEKEEDILNYLINKNCYECFSFLTLEY PCYNGENVKYDLNCRIKNPPVVQLGYNNYSLMCVIFDKGIRDKKDDFYSLENLEKMSNGASNMYIFWLKQQTFTLNSIIE KQKHIKDINQRIFYRLEIEFQKNKIEKIKHKLNLLQKEKNDLINQIKSEKNYFKSQLETKKLEILKIQIQKDNLENSLKL KQQELLDNQKLTEIEKTNLKKEIKNIKINLDNEIKENLIKNKKIEELNTQLNLLNIKFQNEKTKYQQIKENLEKKHNDYL GIFDFLYKKIFQF
Sequences:
>Translated_333_residues MFKLQNQLKIISICLLAFLGMLLINNNQVMAMAIVKNEETISKNNNMQIHGFYLEKEEDILNYLINKNCYECFSFLTLEY PCYNGENVKYDLNCRIKNPPVVQLGYNNYSLMCVIFDKGIRDKKDDFYSLENLEKMSNGASNMYIFWLKQQTFTLNSIIE KQKHIKDINQRIFYRLEIEFQKNKIEKIKHKLNLLQKEKNDLINQIKSEKNYFKSQLETKKLEILKIQIQKDNLENSLKL KQQELLDNQKLTEIEKTNLKKEIKNIKINLDNEIKENLIKNKKIEELNTQLNLLNIKFQNEKTKYQQIKENLEKKHNDYL GIFDFLYKKIFQF >Mature_333_residues MFKLQNQLKIISICLLAFLGMLLINNNQVMAMAIVKNEETISKNNNMQIHGFYLEKEEDILNYLINKNCYECFSFLTLEY PCYNGENVKYDLNCRIKNPPVVQLGYNNYSLMCVIFDKGIRDKKDDFYSLENLEKMSNGASNMYIFWLKQQTFTLNSIIE KQKHIKDINQRIFYRLEIEFQKNKIEKIKHKLNLLQKEKNDLINQIKSEKNYFKSQLETKKLEILKIQIQKDNLENSLKL KQQELLDNQKLTEIEKTNLKKEIKNIKINLDNEIKENLIKNKKIEELNTQLNLLNIKFQNEKTKYQQIKENLEKKHNDYL GIFDFLYKKIFQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40004; Mature: 40004
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKLQNQLKIISICLLAFLGMLLINNNQVMAMAIVKNEETISKNNNMQIHGFYLEKEEDI CCCCHHHHHHHHHHHHHHHHHHEECCCCEEEEEEEECCHHHCCCCCEEEEEEEECCHHHH LNYLINKNCYECFSFLTLEYPCYNGENVKYDLNCRIKNPPVVQLGYNNYSLMCVIFDKGI HHHHHCCCHHHHHHHHEEECCCCCCCCEEEEEEEEECCCCEEEECCCCEEEEEEEECCCC RDKKDDFYSLENLEKMSNGASNMYIFWLKQQTFTLNSIIEKQKHIKDINQRIFYRLEIEF CCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEEEEEE QKNKIEKIKHKLNLLQKEKNDLINQIKSEKNYFKSQLETKKLEILKIQIQKDNLENSLKL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHH KQQELLDNQKLTEIEKTNLKKEIKNIKINLDNEIKENLIKNKKIEELNTQLNLLNIKFQN HHHHHHCCCHHHHHHHHHHHHHHHEEEEEECHHHHHHHHCCCCHHHHCCEEEEEEEEECC EKTKYQQIKENLEKKHNDYLGIFDFLYKKIFQF CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MFKLQNQLKIISICLLAFLGMLLINNNQVMAMAIVKNEETISKNNNMQIHGFYLEKEEDI CCCCHHHHHHHHHHHHHHHHHHEECCCCEEEEEEEECCHHHCCCCCEEEEEEEECCHHHH LNYLINKNCYECFSFLTLEYPCYNGENVKYDLNCRIKNPPVVQLGYNNYSLMCVIFDKGI HHHHHCCCHHHHHHHHEEECCCCCCCCEEEEEEEEECCCCEEEECCCCEEEEEEEECCCC RDKKDDFYSLENLEKMSNGASNMYIFWLKQQTFTLNSIIEKQKHIKDINQRIFYRLEIEF CCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEEEEEE QKNKIEKIKHKLNLLQKEKNDLINQIKSEKNYFKSQLETKKLEILKIQIQKDNLENSLKL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHH KQQELLDNQKLTEIEKTNLKKEIKNIKINLDNEIKENLIKNKKIEELNTQLNLLNIKFQN HHHHHHCCCHHHHHHHHHHHHHHHEEEEEECHHHHHHHHCCCCHHHHCCEEEEEEEEECC EKTKYQQIKENLEKKHNDYLGIFDFLYKKIFQF CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA