| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294513
Identifier: 197294513
GI number: 197294513
Start: 456017
End: 456907
Strand: Direct
Name: 197294513
Synonym: PAa_0455
Alternate gene names: NA
Gene position: 456017-456907 (Clockwise)
Preceding gene: 197294512
Following gene: 197294514
Centisome position: 51.82
GC content: 27.95
Gene sequence:
>891_bases ATGAAACAAATAATCAAGCTAGCAACTCCTTTTGAACGAGTATTCAATGCTTTAGAAGAAATTAAAAATAATTTTTTAAA ATATAATGTTCAATTGGAAATTTTAAGCGAAAAACAAGTGATGGAAAAATACCAAATATCTAGCAATGATGCCTTAAAAA AAGGGTTGATTGATGCAAATATTAGTAATAATTTTCATACAATGCAGGCTTATAATAAATTATACTCAAATGACTACAAT GAATTTCCTTTGGTGATGGTAAGTCCTTTATTTCATCCTAAATATGGTCTATACATTCATAAAAACAACCCTTTAGGTTT AAAAAACTTAGACGATGTTAAAAAACATTCTAAACTCCGTCTTTTATTCGCTCCCTTTAATGAGTTGCACATTGCCCCTT GTGATTTATCGCGTTCACTTTTCCTATTGAAAAAACTTGGCCTTGTAGAAATTGATGAAAGCAAAATAACAGAAAAAGGT TTTAACTTAAATTTACAAGATGTTAAAAACACTTATGATTTAGAATTCATTAAAACTTTGCATTTATTAGAAATATCAAA AAAATTTCAAAATTACCAAAAATATGATTTAGCCATTAATTGTCCTGGTTTGATGAGGGATCCAAATTTTATTCGTATCG GATCCATTGGAGAAGGCAAAGAAGAAAACATAGAACCTCGAGAAAAAGTTTTTTTATCTTATGCTGTTATCTTGGCTGCT AAAAAAGGAACAGAAAAGAATGAAAAAATCAATCTTTTAAAAGAAGTTTTAAATAATTCGAATTACAAAAAGATTCAATT TAAATATGGTGGCGCTACTAATGATTATATTATGGTTCCAAATCAGGAAAGCCTCAAAGAAGAAATAGAGACAAACTACA AACACTTATAA
Upstream 100 bases:
>100_bases TATATTATGATTCAAGACCCTGAAAAAACAGGTCAAAGAATTAAAGAATTATGGCTTAAAGCTTATTAATAAAAATAAAT TTAAAAAGGATTAAATAACG
Downstream 100 bases:
>100_bases TAATTTTGAATTCATCTTTGGATTGTTATTTATTAAATAAATCAATCCTGTTAAAACAAAATATGGACTGAGCTGTTTGA AAACACTATACAACTTTTTT
Product: Putative ABC-type metal ion transport system periplasmic component/surface antigen
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MKQIIKLATPFERVFNALEEIKNNFLKYNVQLEILSEKQVMEKYQISSNDALKKGLIDANISNNFHTMQAYNKLYSNDYN EFPLVMVSPLFHPKYGLYIHKNNPLGLKNLDDVKKHSKLRLLFAPFNELHIAPCDLSRSLFLLKKLGLVEIDESKITEKG FNLNLQDVKNTYDLEFIKTLHLLEISKKFQNYQKYDLAINCPGLMRDPNFIRIGSIGEGKEENIEPREKVFLSYAVILAA KKGTEKNEKINLLKEVLNNSNYKKIQFKYGGATNDYIMVPNQESLKEEIETNYKHL
Sequences:
>Translated_296_residues MKQIIKLATPFERVFNALEEIKNNFLKYNVQLEILSEKQVMEKYQISSNDALKKGLIDANISNNFHTMQAYNKLYSNDYN EFPLVMVSPLFHPKYGLYIHKNNPLGLKNLDDVKKHSKLRLLFAPFNELHIAPCDLSRSLFLLKKLGLVEIDESKITEKG FNLNLQDVKNTYDLEFIKTLHLLEISKKFQNYQKYDLAINCPGLMRDPNFIRIGSIGEGKEENIEPREKVFLSYAVILAA KKGTEKNEKINLLKEVLNNSNYKKIQFKYGGATNDYIMVPNQESLKEEIETNYKHL >Mature_296_residues MKQIIKLATPFERVFNALEEIKNNFLKYNVQLEILSEKQVMEKYQISSNDALKKGLIDANISNNFHTMQAYNKLYSNDYN EFPLVMVSPLFHPKYGLYIHKNNPLGLKNLDDVKKHSKLRLLFAPFNELHIAPCDLSRSLFLLKKLGLVEIDESKITEKG FNLNLQDVKNTYDLEFIKTLHLLEISKKFQNYQKYDLAINCPGLMRDPNFIRIGSIGEGKEENIEPREKVFLSYAVILAA KKGTEKNEKINLLKEVLNNSNYKKIQFKYGGATNDYIMVPNQESLKEEIETNYKHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34418; Mature: 34418
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQIIKLATPFERVFNALEEIKNNFLKYNVQLEILSEKQVMEKYQISSNDALKKGLIDAN CCCHHHHCCHHHHHHHHHHHHHHHHEEEEEEEEEECHHHHHHHHCCCCCHHHHHCCEECC ISNNFHTMQAYNKLYSNDYNEFPLVMVSPLFHPKYGLYIHKNNPLGLKNLDDVKKHSKLR CCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHCCCEE LLFAPFNELHIAPCDLSRSLFLLKKLGLVEIDESKITEKGFNLNLQDVKNTYDLEFIKTL EEEECCCCEEEECCCCCHHHHHHHHCCCEEECHHHHHHCCCCCCHHHHCCCHHHHHHHHH HLLEISKKFQNYQKYDLAINCPGLMRDPNFIRIGSIGEGKEENIEPREKVFLSYAVILAA HHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHEE KKGTEKNEKINLLKEVLNNSNYKKIQFKYGGATNDYIMVPNQESLKEEIETNYKHL CCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEECCCHHHHHHHHHHCCCCC >Mature Secondary Structure MKQIIKLATPFERVFNALEEIKNNFLKYNVQLEILSEKQVMEKYQISSNDALKKGLIDAN CCCHHHHCCHHHHHHHHHHHHHHHHEEEEEEEEEECHHHHHHHHCCCCCHHHHHCCEECC ISNNFHTMQAYNKLYSNDYNEFPLVMVSPLFHPKYGLYIHKNNPLGLKNLDDVKKHSKLR CCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHCCCEE LLFAPFNELHIAPCDLSRSLFLLKKLGLVEIDESKITEKGFNLNLQDVKNTYDLEFIKTL EEEECCCCEEEECCCCCHHHHHHHHCCCEEECHHHHHHCCCCCCHHHHCCCHHHHHHHHH HLLEISKKFQNYQKYDLAINCPGLMRDPNFIRIGSIGEGKEENIEPREKVFLSYAVILAA HHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHEE KKGTEKNEKINLLKEVLNNSNYKKIQFKYGGATNDYIMVPNQESLKEEIETNYKHL CCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEECCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA