| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
Click here to switch to the map view.
The map label for this gene is iscU
Identifier: 197294514
GI number: 197294514
Start: 457305
End: 457604
Strand: Direct
Name: iscU
Synonym: PAa_0456
Alternate gene names: NA
Gene position: 457305-457604 (Clockwise)
Preceding gene: 197294513
Following gene: 197294515
Centisome position: 51.97
GC content: 27.67
Gene sequence:
>300_bases GTGATTATCCAAGTCAAATTAAGCCCTTCCCAAACCATTTTAGATCTCAAATATGAAGCAAATGCTTGCTCTATTTGTGT TGCTTCTGCTAGTTTGATGTCTGTATTTGTGAAAAATTTAGATAAAACAACATCTTTAAATAAAATTAATCATTTTTGCG CAATGATTAACAAAAAAGCTTATGATAAAGAACAATTAGATGAAAATATTCAATCTTTAGATATAGTACATCAATTACCA AATAAAACTAATTGTGTTTTATTACCTTGGCAAACTTTGCAAGCTTTTTGGCTAAATTAG
Upstream 100 bases:
>100_bases ATTAATTCAAAAACATTACCAAAATCCACAAAATACAACAGAGTCCGATTTAAAAGGTTATCAAACATTTAAAAAAAATA TTTCTTGTTGTGGGGATCAA
Downstream 100 bases:
>100_bases TTAAGTGTTTTTTTGTTAACTTTTGGCTTTTGAAAGTTTAAAAAAAAGTTCATTATTCAAAATATAATGTTGGTATTTTG CAAGTTAAAAAAAGACTAAC
Product: NifU homolog involved in Fe-S cluster formation
Products: NA
Alternate protein names: NifU Homolog Involved In Fe-S Cluster Formation; NifU Homolog; IscU Protein
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MIIQVKLSPSQTILDLKYEANACSICVASASLMSVFVKNLDKTTSLNKINHFCAMINKKAYDKEQLDENIQSLDIVHQLP NKTNCVLLPWQTLQAFWLN
Sequences:
>Translated_99_residues MIIQVKLSPSQTILDLKYEANACSICVASASLMSVFVKNLDKTTSLNKINHFCAMINKKAYDKEQLDENIQSLDIVHQLP NKTNCVLLPWQTLQAFWLN >Mature_99_residues MIIQVKLSPSQTILDLKYEANACSICVASASLMSVFVKNLDKTTSLNKINHFCAMINKKAYDKEQLDENIQSLDIVHQLP NKTNCVLLPWQTLQAFWLN
Specific function: Unknown
COG id: COG0822
COG function: function code C; NifU homolog involved in Fe-S cluster formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11241; Mature: 11241
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIQVKLSPSQTILDLKYEANACSICVASASLMSVFVKNLDKTTSLNKINHFCAMINKKA CEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC YDKEQLDENIQSLDIVHQLPNKTNCVLLPWQTLQAFWLN CCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCC >Mature Secondary Structure MIIQVKLSPSQTILDLKYEANACSICVASASLMSVFVKNLDKTTSLNKINHFCAMINKKA CEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC YDKEQLDENIQSLDIVHQLPNKTNCVLLPWQTLQAFWLN CCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA