| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294293
Identifier: 197294293
GI number: 197294293
Start: 187197
End: 188246
Strand: Reverse
Name: 197294293
Synonym: PAa_0156
Alternate gene names: NA
Gene position: 188246-187197 (Counterclockwise)
Preceding gene: 197294296
Following gene: 197294292
Centisome position: 21.39
GC content: 32.19
Gene sequence:
>1050_bases ATGAATAATTACCCAAACTACCCAACCCCATTTCCGCAAAAAAACAACAAACTTCTTTACTCCATTATTGCAATTGTTTC TGCTGTAATCGTTATTTTTGCAATAATTTTCTTTTATAACAAAAACAAAACTACTTCCAACCCCCAAAACCCCGAACAAC AAGAAACCCCAAACAATAGGAATACTTCAAACAAACCAAACTCTCAAAAAAACACACCAACACATCCTGAAAATACTAGA CCATCCAGAACTTCAGGAAATCCATCTGATTTTTCAGGCGATAATTCTTTACCATCTTCCAATTTCAAACCTCAAGATGA AAAAAATAATAAAAACACATCAAATTCCTCCTCTTCTCCACAATCACCAACAACCCCTCAATTTTACACAAACACTCCAA ACCCCAATTCTTCATCATCTCCTCAATCCCCAACCGACTCTACTGAAGAAATAAACCACCTTTCTGCTGAAAACGATTTA CTTTCTCAAGAACTCGAAACATTGTTTAACTATGATTTCAAAAACCACTCTTATGCTTCACAAAAACAAATCACAGACCC TTTAGTTTTCACATCTTCTAATTTGAATGGTTTAAATTACGAACTAGGAGATCGACGCAAATTTTTAAATTTTTACATTA GTGCGTTTGAAACAAACAACGAGCATCATAAAGATTGTTCAACTGTAGAACGAAAATATATTAAAAAAGAAAAAGAATTA TATAATCGCCCTGAATTTTCTCCTTTAAATAATTTAACAAAATTAAATAACAAATTAAAAGAAGAAAAAACAACAGTTGA ACAAAGGATCAAGGAGTCTGTTCAACAAATAGAATCAAGAAACCTTTTATACCCTACTTTTTCTAAATTAAAATCAACAA ATGAAGAATTAGAAAAAATCTCAACTGTAGTTAAAGAAATATCGAGAATGTATTCTAATATCCACAGAAACAAAGAAGAA ACCGCCCGCCAAGCAAACACCAAATACACCCAAATCAAAGCGGACGCCCAAACTAAAAACATCATTCTTCCTAATATCCC TTTTAACTAA
Upstream 100 bases:
>100_bases TCTTTTTTATATCCTTTCCGTTTTATTTGCAAAAAAAAAAAAAACGGTATAATGGAATTGTATTATTTTTTCATTATACT TAATTAGAAAGGACTTAAAT
Downstream 100 bases:
>100_bases ACCCCTCTCAAAAGAGCCTATATTTTCCTTAGGCTCTTTTTTTTATATGCTTTTTTCACTTTTTTTGCACTTCAACTGTT ATCTTTAAAATAATTTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MNNYPNYPTPFPQKNNKLLYSIIAIVSAVIVIFAIIFFYNKNKTTSNPQNPEQQETPNNRNTSNKPNSQKNTPTHPENTR PSRTSGNPSDFSGDNSLPSSNFKPQDEKNNKNTSNSSSSPQSPTTPQFYTNTPNPNSSSSPQSPTDSTEEINHLSAENDL LSQELETLFNYDFKNHSYASQKQITDPLVFTSSNLNGLNYELGDRRKFLNFYISAFETNNEHHKDCSTVERKYIKKEKEL YNRPEFSPLNNLTKLNNKLKEEKTTVEQRIKESVQQIESRNLLYPTFSKLKSTNEELEKISTVVKEISRMYSNIHRNKEE TARQANTKYTQIKADAQTKNIILPNIPFN
Sequences:
>Translated_349_residues MNNYPNYPTPFPQKNNKLLYSIIAIVSAVIVIFAIIFFYNKNKTTSNPQNPEQQETPNNRNTSNKPNSQKNTPTHPENTR PSRTSGNPSDFSGDNSLPSSNFKPQDEKNNKNTSNSSSSPQSPTTPQFYTNTPNPNSSSSPQSPTDSTEEINHLSAENDL LSQELETLFNYDFKNHSYASQKQITDPLVFTSSNLNGLNYELGDRRKFLNFYISAFETNNEHHKDCSTVERKYIKKEKEL YNRPEFSPLNNLTKLNNKLKEEKTTVEQRIKESVQQIESRNLLYPTFSKLKSTNEELEKISTVVKEISRMYSNIHRNKEE TARQANTKYTQIKADAQTKNIILPNIPFN >Mature_349_residues MNNYPNYPTPFPQKNNKLLYSIIAIVSAVIVIFAIIFFYNKNKTTSNPQNPEQQETPNNRNTSNKPNSQKNTPTHPENTR PSRTSGNPSDFSGDNSLPSSNFKPQDEKNNKNTSNSSSSPQSPTTPQFYTNTPNPNSSSSPQSPTDSTEEINHLSAENDL LSQELETLFNYDFKNHSYASQKQITDPLVFTSSNLNGLNYELGDRRKFLNFYISAFETNNEHHKDCSTVERKYIKKEKEL YNRPEFSPLNNLTKLNNKLKEEKTTVEQRIKESVQQIESRNLLYPTFSKLKSTNEELEKISTVVKEISRMYSNIHRNKEE TARQANTKYTQIKADAQTKNIILPNIPFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40036; Mature: 40036
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNYPNYPTPFPQKNNKLLYSIIAIVSAVIVIFAIIFFYNKNKTTSNPQNPEQQETPNNR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCC NTSNKPNSQKNTPTHPENTRPSRTSGNPSDFSGDNSLPSSNFKPQDEKNNKNTSNSSSSP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QSPTTPQFYTNTPNPNSSSSPQSPTDSTEEINHLSAENDLLSQELETLFNYDFKNHSYAS CCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH QKQITDPLVFTSSNLNGLNYELGDRRKFLNFYISAFETNNEHHKDCSTVERKYIKKEKEL HHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH YNRPEFSPLNNLTKLNNKLKEEKTTVEQRIKESVQQIESRNLLYPTFSKLKSTNEELEKI HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHH STVVKEISRMYSNIHRNKEETARQANTKYTQIKADAQTKNIILPNIPFN HHHHHHHHHHHHHHHCCHHHHHHHHCCCHHEEECCCCCCCEECCCCCCC >Mature Secondary Structure MNNYPNYPTPFPQKNNKLLYSIIAIVSAVIVIFAIIFFYNKNKTTSNPQNPEQQETPNNR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCC NTSNKPNSQKNTPTHPENTRPSRTSGNPSDFSGDNSLPSSNFKPQDEKNNKNTSNSSSSP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QSPTTPQFYTNTPNPNSSSSPQSPTDSTEEINHLSAENDLLSQELETLFNYDFKNHSYAS CCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH QKQITDPLVFTSSNLNGLNYELGDRRKFLNFYISAFETNNEHHKDCSTVERKYIKKEKEL HHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH YNRPEFSPLNNLTKLNNKLKEEKTTVEQRIKESVQQIESRNLLYPTFSKLKSTNEELEKI HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHH STVVKEISRMYSNIHRNKEETARQANTKYTQIKADAQTKNIILPNIPFN HHHHHHHHHHHHHHHCCHHHHHHHHCCCHHEEECCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA