| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is cshA [H]
Identifier: 197294292
GI number: 197294292
Start: 184816
End: 186510
Strand: Reverse
Name: cshA [H]
Synonym: PAa_0155
Alternate gene names: 197294292
Gene position: 186510-184816 (Counterclockwise)
Preceding gene: 197294293
Following gene: 197294289
Centisome position: 21.2
GC content: 29.03
Gene sequence:
>1695_bases ATGAATATTTTATTCGAACAATTACCTATTTTAGAACAAACTAAAAAAGCTTTGCAAGAGCTTAACTTTATCGAAGCAAC ACCCATTCAAGCTTTAGTGATCCCAGAAATTATCCAAGGACACGATGTAATTGGACAAGCGCAAACAGGAACAGGAAAAA CTTTTGCCTTTGGAATCCCTATTATTGAAAAAATTGATTATAAATTATCTAAAACTCAAAGTTTAATTTTATGCCCTACT AGAGAATTAACTTTGCAAGTTTATGAAGAGTTGAAAAAATTACTACGTTATTACCCGCAAATTAGAATTGCAGTTGTTTT TGGTGGTGAATCCTACACTAAACAATTTAGAGCTTTAGAAAGTAAACCACATTTAATTATTGCAACTCCAGGAAGAGTGA TTGACCACATAGAAAGAGGCAAAATTGATTTATCAGCGTTAAAAATTTTAACTTTAGATGAAGCCGATGAAATGTTAAAA ATGGGATTTCAAGAAGCTTTAGAAACTATATTAAAACAAATCCCAGAAGAAAGACAAACTGTTTTATTTTCTGCCACTCT TCCTCCTTCCATCAAACAAATTGCAAGCAAATACCAAAAAAACACTAAAATTTTACAAGTTCCTGTTAAAAAACTTGCCG TTAACGCAATTGAACAATATTATTTTTTAGTCAAAGAATTTGATAAAAACAAGTTATTAGTTCGTTTATTAGACTTAAAA AGAGATTATTCAACCATTCTATTTGCCAACACCAAAAAAGACGTGGATGAAATTACTTCTTTTTTACAAGACAAAGGGTT TTTAGCTGATGCTGTTCACGGAGACTTAAAACAAAATCAAAGACAATATGTCATGAATAATTTCCGCAAAGGAAAAATAA AAATCTTAATCGCAACCGATGTGGCTGCAAGAGGGATTGATATTTCTGACATCAAAATGGTAGTTAACTATGATTTACCT CACGAAGATGAAGTTTATGTCCACAGAATCGGAAGAACTGGACGCGCAGGCAAAAAAGGTTTGGCTTATAGTTTTATCAG TCCAAGAAAATTCAGTCAACTCAAAAAATTAGAATATTATTTAAAAGAAAAAGTAAAATTCTTAGAAATTCCTTCAGTTG AAGAAATCAAAAAACAAATTTTGGAAAACTTTGAACAAAAAGTAATAGATATTATTGAAAAAAATAGCCAAGAAAACGCT AATAATCCAATGATTGAAAAATTATTACAAAAATTTTCTTCTGAACAAATCATTCAAGGTTTATTAACAAACATCCAACC AAAAGCAAAAAATTATACAGATATTATACCTCCAAGAATGACATTTACTCCAAGAGAAACATTTAATAACAATTCTTTTG GTAATAGAAGATTTGGAGAAAAACGTTTCCAGAATCCAAAATTTAGCTCCTATAATTCTTATAATTCCTATAATTCTTAT AATTCCTATAGTCAAAAAAGAAATGACTTCATTGAAGCAACAATTAACCTTGGTAAAAAAGATAATATTAACCCAACTGT TTTGATTCGATTATTAAAAGATGAGTACCAAATTTATGGTAAAAACATTGGCAATATCAAACATTTAACCCATGAAACTA TTTTTGAAATTCCGAGTCGTTTTTGGAATCAAATGAAAAATAAATCAGACATTCGCTTCCAAAACAAAATTTTAGTTATC AATAAAAAAGAATAA
Upstream 100 bases:
>100_bases TTTCTTAAAGCAATTTTTAAAAATATTCATTAAGCGCTTGAGCAAAAACATTTTATATTTTTACTTGTATAATTCAAAAA AAGAAAGAAATGAGGAAATT
Downstream 100 bases:
>100_bases AAAAAGATAAAAGAAAAGGCCTTTGTGGGCCTTTATTATTTTTTGTCTCTTCCAACTGCGTTTTTTTTGAAAATATATAA TCACAATTTGAAAAAATCTG
Product: DEAD/DEAH box helicase-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 564; Mature: 564
Protein sequence:
>564_residues MNILFEQLPILEQTKKALQELNFIEATPIQALVIPEIIQGHDVIGQAQTGTGKTFAFGIPIIEKIDYKLSKTQSLILCPT RELTLQVYEELKKLLRYYPQIRIAVVFGGESYTKQFRALESKPHLIIATPGRVIDHIERGKIDLSALKILTLDEADEMLK MGFQEALETILKQIPEERQTVLFSATLPPSIKQIASKYQKNTKILQVPVKKLAVNAIEQYYFLVKEFDKNKLLVRLLDLK RDYSTILFANTKKDVDEITSFLQDKGFLADAVHGDLKQNQRQYVMNNFRKGKIKILIATDVAARGIDISDIKMVVNYDLP HEDEVYVHRIGRTGRAGKKGLAYSFISPRKFSQLKKLEYYLKEKVKFLEIPSVEEIKKQILENFEQKVIDIIEKNSQENA NNPMIEKLLQKFSSEQIIQGLLTNIQPKAKNYTDIIPPRMTFTPRETFNNNSFGNRRFGEKRFQNPKFSSYNSYNSYNSY NSYSQKRNDFIEATINLGKKDNINPTVLIRLLKDEYQIYGKNIGNIKHLTHETIFEIPSRFWNQMKNKSDIRFQNKILVI NKKE
Sequences:
>Translated_564_residues MNILFEQLPILEQTKKALQELNFIEATPIQALVIPEIIQGHDVIGQAQTGTGKTFAFGIPIIEKIDYKLSKTQSLILCPT RELTLQVYEELKKLLRYYPQIRIAVVFGGESYTKQFRALESKPHLIIATPGRVIDHIERGKIDLSALKILTLDEADEMLK MGFQEALETILKQIPEERQTVLFSATLPPSIKQIASKYQKNTKILQVPVKKLAVNAIEQYYFLVKEFDKNKLLVRLLDLK RDYSTILFANTKKDVDEITSFLQDKGFLADAVHGDLKQNQRQYVMNNFRKGKIKILIATDVAARGIDISDIKMVVNYDLP HEDEVYVHRIGRTGRAGKKGLAYSFISPRKFSQLKKLEYYLKEKVKFLEIPSVEEIKKQILENFEQKVIDIIEKNSQENA NNPMIEKLLQKFSSEQIIQGLLTNIQPKAKNYTDIIPPRMTFTPRETFNNNSFGNRRFGEKRFQNPKFSSYNSYNSYNSY NSYSQKRNDFIEATINLGKKDNINPTVLIRLLKDEYQIYGKNIGNIKHLTHETIFEIPSRFWNQMKNKSDIRFQNKILVI NKKE >Mature_564_residues MNILFEQLPILEQTKKALQELNFIEATPIQALVIPEIIQGHDVIGQAQTGTGKTFAFGIPIIEKIDYKLSKTQSLILCPT RELTLQVYEELKKLLRYYPQIRIAVVFGGESYTKQFRALESKPHLIIATPGRVIDHIERGKIDLSALKILTLDEADEMLK MGFQEALETILKQIPEERQTVLFSATLPPSIKQIASKYQKNTKILQVPVKKLAVNAIEQYYFLVKEFDKNKLLVRLLDLK RDYSTILFANTKKDVDEITSFLQDKGFLADAVHGDLKQNQRQYVMNNFRKGKIKILIATDVAARGIDISDIKMVVNYDLP HEDEVYVHRIGRTGRAGKKGLAYSFISPRKFSQLKKLEYYLKEKVKFLEIPSVEEIKKQILENFEQKVIDIIEKNSQENA NNPMIEKLLQKFSSEQIIQGLLTNIQPKAKNYTDIIPPRMTFTPRETFNNNSFGNRRFGEKRFQNPKFSSYNSYNSYNSY NSYSQKRNDFIEATINLGKKDNINPTVLIRLLKDEYQIYGKNIGNIKHLTHETIFEIPSRFWNQMKNKSDIRFQNKILVI NKKE
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI301171475, Length=377, Percent_Identity=41.1140583554377, Blast_Score=263, Evalue=3e-70, Organism=Homo sapiens, GI301171467, Length=377, Percent_Identity=41.1140583554377, Blast_Score=263, Evalue=4e-70, Organism=Homo sapiens, GI87196351, Length=377, Percent_Identity=41.1140583554377, Blast_Score=263, Evalue=4e-70, Organism=Homo sapiens, GI4758138, Length=351, Percent_Identity=39.6011396011396, Blast_Score=260, Evalue=3e-69, Organism=Homo sapiens, GI7661920, Length=368, Percent_Identity=36.4130434782609, Blast_Score=259, Evalue=5e-69, Organism=Homo sapiens, GI148613856, Length=358, Percent_Identity=39.6648044692737, Blast_Score=259, Evalue=6e-69, Organism=Homo sapiens, GI38201710, Length=358, Percent_Identity=39.6648044692737, Blast_Score=259, Evalue=6e-69, Organism=Homo sapiens, GI169881239, Length=376, Percent_Identity=40.4255319148936, Blast_Score=256, Evalue=3e-68, Organism=Homo sapiens, GI13514809, Length=376, Percent_Identity=40.4255319148936, Blast_Score=256, Evalue=3e-68, Organism=Homo sapiens, GI20149629, Length=362, Percent_Identity=37.292817679558, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI50659095, Length=392, Percent_Identity=38.0102040816327, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI13129006, Length=391, Percent_Identity=36.3171355498721, Blast_Score=240, Evalue=3e-63, Organism=Homo sapiens, GI262231852, Length=358, Percent_Identity=36.8715083798883, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI13518015, Length=359, Percent_Identity=36.7688022284123, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI216548263, Length=358, Percent_Identity=36.8715083798883, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI262118318, Length=358, Percent_Identity=36.5921787709497, Blast_Score=236, Evalue=4e-62, Organism=Homo sapiens, GI41327771, Length=365, Percent_Identity=37.5342465753425, Blast_Score=236, Evalue=4e-62, Organism=Homo sapiens, GI45446747, Length=352, Percent_Identity=35.7954545454545, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI45446743, Length=352, Percent_Identity=35.7954545454545, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI224593278, Length=411, Percent_Identity=34.5498783454988, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI31542656, Length=379, Percent_Identity=34.5646437994723, Blast_Score=225, Evalue=8e-59, Organism=Homo sapiens, GI21071032, Length=348, Percent_Identity=38.2183908045977, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI188035877, Length=367, Percent_Identity=33.7874659400545, Blast_Score=222, Evalue=8e-58, Organism=Homo sapiens, GI222352149, Length=352, Percent_Identity=37.5, Blast_Score=219, Evalue=5e-57, Organism=Homo sapiens, GI164664518, Length=373, Percent_Identity=31.9034852546917, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI55749865, Length=353, Percent_Identity=35.1274787535411, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI41327773, Length=340, Percent_Identity=36.1764705882353, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI83700235, Length=369, Percent_Identity=34.6883468834688, Blast_Score=213, Evalue=4e-55, Organism=Homo sapiens, GI4503529, Length=369, Percent_Identity=34.9593495934959, Blast_Score=213, Evalue=4e-55, Organism=Homo sapiens, GI51094101, Length=371, Percent_Identity=33.9622641509434, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI164419743, Length=371, Percent_Identity=33.9622641509434, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI21040371, Length=335, Percent_Identity=32.2388059701493, Blast_Score=210, Evalue=3e-54, Organism=Homo sapiens, GI4758112, Length=335, Percent_Identity=31.9402985074627, Blast_Score=209, Evalue=7e-54, Organism=Homo sapiens, GI18375623, Length=335, Percent_Identity=31.9402985074627, Blast_Score=209, Evalue=7e-54, Organism=Homo sapiens, GI41327776, Length=362, Percent_Identity=33.9779005524862, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI41327779, Length=362, Percent_Identity=35.0828729281768, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI8922886, Length=386, Percent_Identity=31.0880829015544, Blast_Score=195, Evalue=8e-50, Organism=Homo sapiens, GI6005743, Length=386, Percent_Identity=31.0880829015544, Blast_Score=195, Evalue=1e-49, Organism=Homo sapiens, GI164419732, Length=369, Percent_Identity=31.9783197831978, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI62241024, Length=348, Percent_Identity=32.183908045977, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI62241022, Length=370, Percent_Identity=31.3513513513514, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI13514831, Length=376, Percent_Identity=33.2446808510638, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI38327634, Length=396, Percent_Identity=32.5757575757576, Blast_Score=186, Evalue=6e-47, Organism=Homo sapiens, GI256223453, Length=352, Percent_Identity=29.8295454545455, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI38569503, Length=338, Percent_Identity=32.8402366863905, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI38569505, Length=338, Percent_Identity=32.8402366863905, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI17505907, Length=388, Percent_Identity=30.9278350515464, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI9506931, Length=396, Percent_Identity=27.7777777777778, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI4826686, Length=337, Percent_Identity=29.9703264094956, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI154759257, Length=390, Percent_Identity=28.4615384615385, Blast_Score=140, Evalue=5e-33, Organism=Homo sapiens, GI9966805, Length=320, Percent_Identity=30.3125, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI256773275, Length=399, Percent_Identity=27.8195488721804, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI20336298, Length=185, Percent_Identity=37.2972972972973, Blast_Score=120, Evalue=4e-27, Organism=Homo sapiens, GI284005309, Length=386, Percent_Identity=20.9844559585492, Blast_Score=75, Evalue=2e-13, Organism=Escherichia coli, GI87082221, Length=532, Percent_Identity=35.5263157894737, Blast_Score=334, Evalue=1e-92, Organism=Escherichia coli, GI1787605, Length=359, Percent_Identity=42.0612813370474, Blast_Score=316, Evalue=3e-87, Organism=Escherichia coli, GI1787016, Length=388, Percent_Identity=35.5670103092784, Blast_Score=247, Evalue=1e-66, Organism=Escherichia coli, GI1790214, Length=370, Percent_Identity=35.1351351351351, Blast_Score=236, Evalue=2e-63, Organism=Escherichia coli, GI1788930, Length=362, Percent_Identity=35.9116022099448, Blast_Score=212, Evalue=4e-56, Organism=Escherichia coli, GI48994977, Length=365, Percent_Identity=24.9315068493151, Blast_Score=83, Evalue=5e-17, Organism=Caenorhabditis elegans, GI71995724, Length=368, Percent_Identity=37.5, Blast_Score=264, Evalue=1e-70, Organism=Caenorhabditis elegans, GI71987143, Length=368, Percent_Identity=35.8695652173913, Blast_Score=263, Evalue=2e-70, Organism=Caenorhabditis elegans, GI17507121, Length=368, Percent_Identity=37.2282608695652, Blast_Score=263, Evalue=2e-70, Organism=Caenorhabditis elegans, GI115533224, Length=368, Percent_Identity=38.8586956521739, Blast_Score=257, Evalue=1e-68, Organism=Caenorhabditis elegans, GI17555296, Length=403, Percent_Identity=36.2282878411911, Blast_Score=250, Evalue=2e-66, Organism=Caenorhabditis elegans, GI71995718, Length=368, Percent_Identity=38.0434782608696, Blast_Score=237, Evalue=1e-62, Organism=Caenorhabditis elegans, GI17510309, Length=347, Percent_Identity=38.9048991354467, Blast_Score=233, Evalue=1e-61, Organism=Caenorhabditis elegans, GI17510307, Length=347, Percent_Identity=38.9048991354467, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI71995514, Length=348, Percent_Identity=38.7931034482759, Blast_Score=233, Evalue=3e-61, Organism=Caenorhabditis elegans, GI32565321, Length=378, Percent_Identity=34.6560846560847, Blast_Score=231, Evalue=8e-61, Organism=Caenorhabditis elegans, GI115532546, Length=379, Percent_Identity=33.245382585752, Blast_Score=228, Evalue=7e-60, Organism=Caenorhabditis elegans, GI115532548, Length=379, Percent_Identity=33.245382585752, Blast_Score=227, Evalue=1e-59, Organism=Caenorhabditis elegans, GI17537549, Length=393, Percent_Identity=33.587786259542, Blast_Score=225, Evalue=5e-59, Organism=Caenorhabditis elegans, GI17552114, Length=362, Percent_Identity=32.5966850828729, Blast_Score=222, Evalue=4e-58, Organism=Caenorhabditis elegans, GI86570094, Length=342, Percent_Identity=38.3040935672515, Blast_Score=221, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17510559, Length=440, Percent_Identity=31.5909090909091, Blast_Score=220, Evalue=2e-57, Organism=Caenorhabditis elegans, GI71999646, Length=369, Percent_Identity=33.3333333333333, Blast_Score=218, Evalue=6e-57, Organism=Caenorhabditis elegans, GI71999644, Length=369, Percent_Identity=33.3333333333333, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI71982858, Length=335, Percent_Identity=31.9402985074627, Blast_Score=214, Evalue=1e-55, Organism=Caenorhabditis elegans, GI17552642, Length=376, Percent_Identity=35.1063829787234, Blast_Score=212, Evalue=3e-55, Organism=Caenorhabditis elegans, GI17507945, Length=359, Percent_Identity=35.6545961002786, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI17507879, Length=370, Percent_Identity=35.6756756756757, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17507877, Length=370, Percent_Identity=34.0540540540541, Blast_Score=199, Evalue=4e-51, Organism=Caenorhabditis elegans, GI193206561, Length=386, Percent_Identity=29.5336787564767, Blast_Score=194, Evalue=8e-50, Organism=Caenorhabditis elegans, GI17507881, Length=370, Percent_Identity=33.7837837837838, Blast_Score=190, Evalue=2e-48, Organism=Caenorhabditis elegans, GI17509811, Length=369, Percent_Identity=31.9783197831978, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI193208216, Length=378, Percent_Identity=32.010582010582, Blast_Score=185, Evalue=5e-47, Organism=Caenorhabditis elegans, GI17536099, Length=400, Percent_Identity=31.5, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17536101, Length=400, Percent_Identity=31.5, Blast_Score=179, Evalue=5e-45, Organism=Caenorhabditis elegans, GI17536103, Length=400, Percent_Identity=31.5, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17505370, Length=389, Percent_Identity=31.6195372750643, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17553716, Length=361, Percent_Identity=29.0858725761773, Blast_Score=171, Evalue=7e-43, Organism=Caenorhabditis elegans, GI71990816, Length=374, Percent_Identity=32.0855614973262, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17508543, Length=367, Percent_Identity=28.8828337874659, Blast_Score=161, Evalue=7e-40, Organism=Caenorhabditis elegans, GI17507641, Length=386, Percent_Identity=30.5699481865285, Blast_Score=161, Evalue=9e-40, Organism=Caenorhabditis elegans, GI32564046, Length=379, Percent_Identity=30.8707124010554, Blast_Score=157, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17556951, Length=378, Percent_Identity=29.3650793650794, Blast_Score=148, Evalue=6e-36, Organism=Caenorhabditis elegans, GI25148291, Length=408, Percent_Identity=26.2254901960784, Blast_Score=138, Evalue=8e-33, Organism=Caenorhabditis elegans, GI25148203, Length=411, Percent_Identity=25.5474452554745, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI71997889, Length=367, Percent_Identity=28.3378746594005, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI71982862, Length=195, Percent_Identity=30.2564102564103, Blast_Score=125, Evalue=8e-29, Organism=Caenorhabditis elegans, GI25148205, Length=335, Percent_Identity=24.1791044776119, Blast_Score=105, Evalue=9e-23, Organism=Caenorhabditis elegans, GI71987152, Length=110, Percent_Identity=41.8181818181818, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17566630, Length=334, Percent_Identity=26.6467065868263, Blast_Score=92, Evalue=8e-19, Organism=Caenorhabditis elegans, GI32564293, Length=111, Percent_Identity=32.4324324324324, Blast_Score=77, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6321856, Length=363, Percent_Identity=40.2203856749311, Blast_Score=260, Evalue=4e-70, Organism=Saccharomyces cerevisiae, GI6324217, Length=337, Percent_Identity=41.839762611276, Blast_Score=258, Evalue=2e-69, Organism=Saccharomyces cerevisiae, GI6324778, Length=392, Percent_Identity=37.5, Blast_Score=253, Evalue=5e-68, Organism=Saccharomyces cerevisiae, GI6325138, Length=399, Percent_Identity=37.34335839599, Blast_Score=251, Evalue=2e-67, Organism=Saccharomyces cerevisiae, GI6323021, Length=353, Percent_Identity=37.3937677053824, Blast_Score=237, Evalue=4e-63, Organism=Saccharomyces cerevisiae, GI6321360, Length=335, Percent_Identity=39.7014925373134, Blast_Score=234, Evalue=2e-62, Organism=Saccharomyces cerevisiae, GI6322912, Length=369, Percent_Identity=36.5853658536585, Blast_Score=234, Evalue=3e-62, Organism=Saccharomyces cerevisiae, GI6322323, Length=369, Percent_Identity=36.5853658536585, Blast_Score=234, Evalue=3e-62, Organism=Saccharomyces cerevisiae, GI6320224, Length=365, Percent_Identity=35.6164383561644, Blast_Score=233, Evalue=6e-62, Organism=Saccharomyces cerevisiae, GI6320041, Length=366, Percent_Identity=35.792349726776, Blast_Score=227, Evalue=3e-60, Organism=Saccharomyces cerevisiae, GI6321963, Length=375, Percent_Identity=36, Blast_Score=221, Evalue=3e-58, Organism=Saccharomyces cerevisiae, GI6320119, Length=340, Percent_Identity=34.1176470588235, Blast_Score=216, Evalue=5e-57, Organism=Saccharomyces cerevisiae, GI6324620, Length=398, Percent_Identity=33.9195979899498, Blast_Score=214, Evalue=3e-56, Organism=Saccharomyces cerevisiae, GI6322427, Length=363, Percent_Identity=34.9862258953168, Blast_Score=205, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6320449, Length=355, Percent_Identity=34.3661971830986, Blast_Score=202, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6323947, Length=364, Percent_Identity=32.967032967033, Blast_Score=192, Evalue=9e-50, Organism=Saccharomyces cerevisiae, GI6321111, Length=413, Percent_Identity=32.2033898305085, Blast_Score=191, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6319618, Length=422, Percent_Identity=32.4644549763033, Blast_Score=182, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6320400, Length=431, Percent_Identity=31.554524361949, Blast_Score=174, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6319714, Length=400, Percent_Identity=28.5, Blast_Score=169, Evalue=8e-43, Organism=Saccharomyces cerevisiae, GI6323306, Length=413, Percent_Identity=30.5084745762712, Blast_Score=162, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6320173, Length=274, Percent_Identity=33.5766423357664, Blast_Score=144, Evalue=4e-35, Organism=Saccharomyces cerevisiae, GI6321267, Length=324, Percent_Identity=30.8641975308642, Blast_Score=142, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6322876, Length=410, Percent_Identity=27.8048780487805, Blast_Score=137, Evalue=4e-33, Organism=Saccharomyces cerevisiae, GI6324366, Length=348, Percent_Identity=28.448275862069, Blast_Score=132, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6321374, Length=476, Percent_Identity=23.3193277310924, Blast_Score=93, Evalue=1e-19, Organism=Drosophila melanogaster, GI24584399, Length=331, Percent_Identity=40.1812688821752, Blast_Score=261, Evalue=1e-69, Organism=Drosophila melanogaster, GI28574962, Length=373, Percent_Identity=38.6058981233244, Blast_Score=260, Evalue=1e-69, Organism=Drosophila melanogaster, GI17985987, Length=398, Percent_Identity=38.9447236180905, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI24645031, Length=368, Percent_Identity=37.2282608695652, Blast_Score=255, Evalue=5e-68, Organism=Drosophila melanogaster, GI21355075, Length=380, Percent_Identity=37.6315789473684, Blast_Score=251, Evalue=1e-66, Organism=Drosophila melanogaster, GI18857967, Length=380, Percent_Identity=37.1052631578947, Blast_Score=241, Evalue=9e-64, Organism=Drosophila melanogaster, GI24644483, Length=387, Percent_Identity=35.9173126614987, Blast_Score=238, Evalue=1e-62, Organism=Drosophila melanogaster, GI281361218, Length=387, Percent_Identity=35.9173126614987, Blast_Score=238, Evalue=1e-62, Organism=Drosophila melanogaster, GI24644481, Length=387, Percent_Identity=35.9173126614987, Blast_Score=238, Evalue=1e-62, Organism=Drosophila melanogaster, GI24644487, Length=387, Percent_Identity=35.9173126614987, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI45551833, Length=387, Percent_Identity=35.9173126614987, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI24644485, Length=387, Percent_Identity=35.9173126614987, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI24644479, Length=387, Percent_Identity=35.9173126614987, Blast_Score=237, Evalue=2e-62, Organism=Drosophila melanogaster, GI24585582, Length=364, Percent_Identity=36.8131868131868, Blast_Score=236, Evalue=3e-62, Organism=Drosophila melanogaster, GI24582080, Length=371, Percent_Identity=36.3881401617251, Blast_Score=235, Evalue=6e-62, Organism=Drosophila melanogaster, GI24582078, Length=371, Percent_Identity=36.3881401617251, Blast_Score=235, Evalue=6e-62, Organism=Drosophila melanogaster, GI17136248, Length=371, Percent_Identity=36.3881401617251, Blast_Score=235, Evalue=6e-62, Organism=Drosophila melanogaster, GI24582075, Length=371, Percent_Identity=36.3881401617251, Blast_Score=235, Evalue=6e-62, Organism=Drosophila melanogaster, GI24662330, Length=350, Percent_Identity=37.4285714285714, Blast_Score=233, Evalue=4e-61, Organism=Drosophila melanogaster, GI24584994, Length=364, Percent_Identity=37.3626373626374, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI24642151, Length=353, Percent_Identity=35.6940509915014, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI28575014, Length=369, Percent_Identity=34.9593495934959, Blast_Score=225, Evalue=6e-59, Organism=Drosophila melanogaster, GI24583279, Length=369, Percent_Identity=33.0623306233062, Blast_Score=222, Evalue=5e-58, Organism=Drosophila melanogaster, GI17136814, Length=361, Percent_Identity=35.7340720221607, Blast_Score=222, Evalue=5e-58, Organism=Drosophila melanogaster, GI24583281, Length=369, Percent_Identity=33.0623306233062, Blast_Score=221, Evalue=8e-58, Organism=Drosophila melanogaster, GI21356161, Length=349, Percent_Identity=36.9627507163324, Blast_Score=218, Evalue=1e-56, Organism=Drosophila melanogaster, GI17977678, Length=337, Percent_Identity=36.7952522255193, Blast_Score=215, Evalue=6e-56, Organism=Drosophila melanogaster, GI281365720, Length=316, Percent_Identity=37.6582278481013, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI24581954, Length=336, Percent_Identity=32.1428571428571, Blast_Score=201, Evalue=2e-51, Organism=Drosophila melanogaster, GI24581952, Length=336, Percent_Identity=32.1428571428571, Blast_Score=201, Evalue=2e-51, Organism=Drosophila melanogaster, GI24581956, Length=336, Percent_Identity=32.1428571428571, Blast_Score=201, Evalue=2e-51, Organism=Drosophila melanogaster, GI28571808, Length=443, Percent_Identity=30.4740406320542, Blast_Score=188, Evalue=8e-48, Organism=Drosophila melanogaster, GI28571809, Length=443, Percent_Identity=30.4740406320542, Blast_Score=188, Evalue=8e-48, Organism=Drosophila melanogaster, GI17647335, Length=377, Percent_Identity=27.8514588859416, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI24642822, Length=376, Percent_Identity=31.6489361702128, Blast_Score=179, Evalue=5e-45, Organism=Drosophila melanogaster, GI24666101, Length=368, Percent_Identity=31.7934782608696, Blast_Score=172, Evalue=5e-43, Organism=Drosophila melanogaster, GI21355559, Length=368, Percent_Identity=30.4347826086957, Blast_Score=166, Evalue=3e-41, Organism=Drosophila melanogaster, GI24643725, Length=382, Percent_Identity=29.3193717277487, Blast_Score=162, Evalue=6e-40, Organism=Drosophila melanogaster, GI20130173, Length=440, Percent_Identity=29.3181818181818, Blast_Score=152, Evalue=8e-37, Organism=Drosophila melanogaster, GI24668515, Length=327, Percent_Identity=29.0519877675841, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI17136666, Length=427, Percent_Identity=27.4004683840749, Blast_Score=141, Evalue=2e-33, Organism=Drosophila melanogaster, GI19920478, Length=352, Percent_Identity=27.8409090909091, Blast_Score=129, Evalue=4e-30, Organism=Drosophila melanogaster, GI18859659, Length=199, Percent_Identity=34.1708542713568, Blast_Score=122, Evalue=7e-28, Organism=Drosophila melanogaster, GI28571338, Length=199, Percent_Identity=34.1708542713568, Blast_Score=122, Evalue=7e-28, Organism=Drosophila melanogaster, GI24640164, Length=391, Percent_Identity=24.2966751918159, Blast_Score=102, Evalue=8e-22, Organism=Drosophila melanogaster, GI24646066, Length=344, Percent_Identity=22.093023255814, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 65389; Mature: 65389
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILFEQLPILEQTKKALQELNFIEATPIQALVIPEIIQGHDVIGQAQTGTGKTFAFGIP CCCCHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCC IIEKIDYKLSKTQSLILCPTRELTLQVYEELKKLLRYYPQIRIAVVFGGESYTKQFRALE HHHHHCCHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHC SKPHLIIATPGRVIDHIERGKIDLSALKILTLDEADEMLKMGFQEALETILKQIPEERQT CCCCEEEECCCHHHHHHHCCCEEEHHEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHE VLFSATLPPSIKQIASKYQKNTKILQVPVKKLAVNAIEQYYFLVKEFDKNKLLVRLLDLK EEEEECCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC RDYSTILFANTKKDVDEITSFLQDKGFLADAVHGDLKQNQRQYVMNNFRKGKIKILIATD CCCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC VAARGIDISDIKMVVNYDLPHEDEVYVHRIGRTGRAGKKGLAYSFISPRKFSQLKKLEYY HHHCCCCHHHEEEEEECCCCCCCCHHEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHHH LKEKVKFLEIPSVEEIKKQILENFEQKVIDIIEKNSQENANNPMIEKLLQKFSSEQIIQG HHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHHH LLTNIQPKAKNYTDIIPPRMTFTPRETFNNNSFGNRRFGEKRFQNPKFSSYNSYNSYNSY HHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC NSYSQKRNDFIEATINLGKKDNINPTVLIRLLKDEYQIYGKNIGNIKHLTHETIFEIPSR HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH FWNQMKNKSDIRFQNKILVINKKE HHHHHCCCCCCEEECEEEEEECCC >Mature Secondary Structure MNILFEQLPILEQTKKALQELNFIEATPIQALVIPEIIQGHDVIGQAQTGTGKTFAFGIP CCCCHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCC IIEKIDYKLSKTQSLILCPTRELTLQVYEELKKLLRYYPQIRIAVVFGGESYTKQFRALE HHHHHCCHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHC SKPHLIIATPGRVIDHIERGKIDLSALKILTLDEADEMLKMGFQEALETILKQIPEERQT CCCCEEEECCCHHHHHHHCCCEEEHHEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHE VLFSATLPPSIKQIASKYQKNTKILQVPVKKLAVNAIEQYYFLVKEFDKNKLLVRLLDLK EEEEECCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC RDYSTILFANTKKDVDEITSFLQDKGFLADAVHGDLKQNQRQYVMNNFRKGKIKILIATD CCCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC VAARGIDISDIKMVVNYDLPHEDEVYVHRIGRTGRAGKKGLAYSFISPRKFSQLKKLEYY HHHCCCCHHHEEEEEECCCCCCCCHHEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHHH LKEKVKFLEIPSVEEIKKQILENFEQKVIDIIEKNSQENANNPMIEKLLQKFSSEQIIQG HHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHHH LLTNIQPKAKNYTDIIPPRMTFTPRETFNNNSFGNRRFGEKRFQNPKFSSYNSYNSYNSY HHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC NSYSQKRNDFIEATINLGKKDNINPTVLIRLLKDEYQIYGKNIGNIKHLTHETIFEIPSR HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH FWNQMKNKSDIRFQNKILVINKKE HHHHHCCCCCCEEECEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA