| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294256
Identifier: 197294256
GI number: 197294256
Start: 132510
End: 133430
Strand: Direct
Name: 197294256
Synonym: PAa_0119
Alternate gene names: NA
Gene position: 132510-133430 (Clockwise)
Preceding gene: 197294255
Following gene: 197294257
Centisome position: 15.06
GC content: 31.27
Gene sequence:
>921_bases TTGTTATTTTCAAAAAAATATCGTATACATTTTATTTTCAACCTTATTATTTGTGCTATTCTTTCGGGCTCATTAATAAG CGTTATTGCCCTAGATTGGCGTGAACCTAATAAGCAAGTTGAAAAAAACAGTCAAATCGCTTCTACCAGTGGTAATTTTG ATTTCTTTAATGTAGATGATGAAAAAAAATTGATTCCTCAAGGTATTAATAAATCATCTGATGAAGTTCATGAAAAAGAA TTTTTAATTAAATCCAAAGACGCATTAAATGAAAATCAACAAGCAACATTGGATATTAAGGCAACTGTAGAGGCGAAAGA TCATGGATTTAATGACCCAGAAAAAATACAAACATTAAATGATTTATTAAAAAATGCCGTAAAGTTTCAACATTTTATTG TAGAAGCAACAAATAATAATGAAACTGAATTGAATGCAAACACACGAGCAAAAGGAGAATTTATTGTAAAAACAAAAGTT TGGTTAGATAATAAAGTTTTAGGAGAATCCACAAACCAAGCTGCCTTTAATTTGTTAAAACAAGCAGCAACAAACTCTGA TTTCAGTTTAAGTTTTTCACATAGTTTGAAACTCAATAATGATATTTGGCACGACCAAATAGAACATGTTTGGGACATAA AATTAAATTTAGTAAATTACAATAATTCTTTAGAACAAGAAACAGTAACTTCACAAAATCCAACATTAAGTCCTGATGAT GCAACAGTAACTGATGGACGCCAAGGTTCAAAAGAATCTCAACTAGAAAATACCGTAAATACAAGTAATAATCGCGGAGG TTTGATCTTTAATCTTGGTTGGGGTTTGAACCGCTTTAGAGATGGAGCAGTTGCGGCGGGAAGGGGATTGATAAATGCTG GAAAACAATTATTGAGCGGCCAGGACGACAAAAAAAAATAA
Upstream 100 bases:
>100_bases ATTTTTTCATTTTTTTTCATACAGATGAAAGATTAAAAAGACTTAAAAATAACAAATAGAACAATTTCTTTCATAATAAA ATAAAAAAGGAGCAATTCCA
Downstream 100 bases:
>100_bases CCCACCAAACCAATCTTAATAACAAAATAATTTTAACTTTTAAAAACTATCATAAACGATAGTCTTTTTTTGTTCCGTTT CATTAAATTAATTATTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MLFSKKYRIHFIFNLIICAILSGSLISVIALDWREPNKQVEKNSQIASTSGNFDFFNVDDEKKLIPQGINKSSDEVHEKE FLIKSKDALNENQQATLDIKATVEAKDHGFNDPEKIQTLNDLLKNAVKFQHFIVEATNNNETELNANTRAKGEFIVKTKV WLDNKVLGESTNQAAFNLLKQAATNSDFSLSFSHSLKLNNDIWHDQIEHVWDIKLNLVNYNNSLEQETVTSQNPTLSPDD ATVTDGRQGSKESQLENTVNTSNNRGGLIFNLGWGLNRFRDGAVAAGRGLINAGKQLLSGQDDKKK
Sequences:
>Translated_306_residues MLFSKKYRIHFIFNLIICAILSGSLISVIALDWREPNKQVEKNSQIASTSGNFDFFNVDDEKKLIPQGINKSSDEVHEKE FLIKSKDALNENQQATLDIKATVEAKDHGFNDPEKIQTLNDLLKNAVKFQHFIVEATNNNETELNANTRAKGEFIVKTKV WLDNKVLGESTNQAAFNLLKQAATNSDFSLSFSHSLKLNNDIWHDQIEHVWDIKLNLVNYNNSLEQETVTSQNPTLSPDD ATVTDGRQGSKESQLENTVNTSNNRGGLIFNLGWGLNRFRDGAVAAGRGLINAGKQLLSGQDDKKK >Mature_306_residues MLFSKKYRIHFIFNLIICAILSGSLISVIALDWREPNKQVEKNSQIASTSGNFDFFNVDDEKKLIPQGINKSSDEVHEKE FLIKSKDALNENQQATLDIKATVEAKDHGFNDPEKIQTLNDLLKNAVKFQHFIVEATNNNETELNANTRAKGEFIVKTKV WLDNKVLGESTNQAAFNLLKQAATNSDFSLSFSHSLKLNNDIWHDQIEHVWDIKLNLVNYNNSLEQETVTSQNPTLSPDD ATVTDGRQGSKESQLENTVNTSNNRGGLIFNLGWGLNRFRDGAVAAGRGLINAGKQLLSGQDDKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34291; Mature: 34291
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFSKKYRIHFIFNLIICAILSGSLISVIALDWREPNKQVEKNSQIASTSGNFDFFNVDD CCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCCEEECCCCCEEEECCC EKKLIPQGINKSSDEVHEKEFLIKSKDALNENQQATLDIKATVEAKDHGFNDPEKIQTLN HHHHHHCCCCCCHHHHHHHHHHHHCHHHCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHH DLLKNAVKFQHFIVEATNNNETELNANTRAKGEFIVKTKVWLDNKVLGESTNQAAFNLLK HHHHHHHHHEEEEEEECCCCCEEECCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHH QAATNSDFSLSFSHSLKLNNDIWHDQIEHVWDIKLNLVNYNNSLEQETVTSQNPTLSPDD HHHCCCCEEEEEEECEEECCCCCHHHHHHEEEEEEEEEECCCCCCHHHHCCCCCCCCCCC ATVTDGRQGSKESQLENTVNTSNNRGGLIFNLGWGLNRFRDGAVAAGRGLINAGKQLLSG CCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCHHHCCCCHHHCCHHHHHHHHHHCC QDDKKK CCCCCC >Mature Secondary Structure MLFSKKYRIHFIFNLIICAILSGSLISVIALDWREPNKQVEKNSQIASTSGNFDFFNVDD CCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCCEEECCCCCEEEECCC EKKLIPQGINKSSDEVHEKEFLIKSKDALNENQQATLDIKATVEAKDHGFNDPEKIQTLN HHHHHHCCCCCCHHHHHHHHHHHHCHHHCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHH DLLKNAVKFQHFIVEATNNNETELNANTRAKGEFIVKTKVWLDNKVLGESTNQAAFNLLK HHHHHHHHHEEEEEEECCCCCEEECCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHH QAATNSDFSLSFSHSLKLNNDIWHDQIEHVWDIKLNLVNYNNSLEQETVTSQNPTLSPDD HHHCCCCEEEEEEECEEECCCCCHHHHHHEEEEEEEEEECCCCCCHHHHCCCCCCCCCCC ATVTDGRQGSKESQLENTVNTSNNRGGLIFNLGWGLNRFRDGAVAAGRGLINAGKQLLSG CCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCHHHCCCCHHHCCHHHHHHHHHHCC QDDKKK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA