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The map label for this gene is yqfA [H]

Identifier: 197294257

GI number: 197294257

Start: 133720

End: 134424

Strand: Direct

Name: yqfA [H]

Synonym: PAa_0120

Alternate gene names: 197294257

Gene position: 133720-134424 (Clockwise)

Preceding gene: 197294256

Following gene: 197294258

Centisome position: 15.2

GC content: 32.91

Gene sequence:

>705_bases
ATGATTATGAAATGGCCTACCAAAAAAACCGGCAGACAAACTTATGGCGAAGAAATTGCCAACGCCATTTCTCATGGTTT
AATGGTCTTTTTTGGAATTTTTATTCTTGTTTTTTTCATCATCCAAACTAACAAAAAAAGCCCATCTGACGTCCCTATTG
TTTTAATTTTTAGTATTTCTGTCATCCTTCTTTATTTGGCAAGCACTCTCAACCATTCCTTATCCTTCACCAAAGCACAT
AAATTTTTTCAAAAAAGCGACCATATTAGTATTTATGTGCTTATTTGGGGCACTTTTGCACCTATTTTGCTACTTTTAAA
GGGTTTGCAAGGCCCTTCCTTGGTTAGTGAAATAATACCATACCTTACTAAAGGTCGCCTGATTTTTGTTTGTCAATGTC
TTTTGGTTTTGTTAGGAATTGTTGGCAAAATCTTTTGGTTTGAAAAATGGGAACACTTGCACCTCACTCTTTTTCTTTTG
TTTGGGTGGAGTGGTTTGCTATTTGTTAAGGAATTGTTTCAACCAGGCAACGAACTCTTTTTTCTTTTTATTTTCTTAGG
GGGTTGTTTTTATAGTGTTGGGGTTTATTTTTTTGTGAAAGACTATAAAAAATATTTCCATTTTATTTGGCATCTTTTTG
TTATTTTAGGGACTACATTTCATGCTTTGGGTATTTTTTATATGTTGAATAGTTTGAACAAATAA

Upstream 100 bases:

>100_bases
TTTAGGTGTTTAGCTATTTTTTTCTTTTTAATAAAAACATTTGCAAATTAGGGTTTTGATATGCTAAAATATATGTGATA
TTTTAAAATAATTAAGGAGA

Downstream 100 bases:

>100_bases
AACTTTTTTAATCCTTTGTTTTTTTATTTAATTCCACCCAAAAAAATCCCTTTTTATTTTTTTTGATTCAAGTGTATTAT
TGAAAAAAGTTTAAAACAAA

Product: Hemolysin III related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MIMKWPTKKTGRQTYGEEIANAISHGLMVFFGIFILVFFIIQTNKKSPSDVPIVLIFSISVILLYLASTLNHSLSFTKAH
KFFQKSDHISIYVLIWGTFAPILLLLKGLQGPSLVSEIIPYLTKGRLIFVCQCLLVLLGIVGKIFWFEKWEHLHLTLFLL
FGWSGLLFVKELFQPGNELFFLFIFLGGCFYSVGVYFFVKDYKKYFHFIWHLFVILGTTFHALGIFYMLNSLNK

Sequences:

>Translated_234_residues
MIMKWPTKKTGRQTYGEEIANAISHGLMVFFGIFILVFFIIQTNKKSPSDVPIVLIFSISVILLYLASTLNHSLSFTKAH
KFFQKSDHISIYVLIWGTFAPILLLLKGLQGPSLVSEIIPYLTKGRLIFVCQCLLVLLGIVGKIFWFEKWEHLHLTLFLL
FGWSGLLFVKELFQPGNELFFLFIFLGGCFYSVGVYFFVKDYKKYFHFIWHLFVILGTTFHALGIFYMLNSLNK
>Mature_234_residues
MIMKWPTKKTGRQTYGEEIANAISHGLMVFFGIFILVFFIIQTNKKSPSDVPIVLIFSISVILLYLASTLNHSLSFTKAH
KFFQKSDHISIYVLIWGTFAPILLLLKGLQGPSLVSEIIPYLTKGRLIFVCQCLLVLLGIVGKIFWFEKWEHLHLTLFLL
FGWSGLLFVKELFQPGNELFFLFIFLGGCFYSVGVYFFVKDYKKYFHFIWHLFVILGTTFHALGIFYMLNSLNK

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Escherichia coli, GI1789266, Length=228, Percent_Identity=35.9649122807018, Blast_Score=111, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 27076; Mature: 27076

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMKWPTKKTGRQTYGEEIANAISHGLMVFFGIFILVFFIIQTNKKSPSDVPIVLIFSIS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
VILLYLASTLNHSLSFTKAHKFFQKSDHISIYVLIWGTFAPILLLLKGLQGPSLVSEIIP
HHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHH
YLTKGRLIFVCQCLLVLLGIVGKIFWFEKWEHLHLTLFLLFGWSGLLFVKELFQPGNELF
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHH
FLFIFLGGCFYSVGVYFFVKDYKKYFHFIWHLFVILGTTFHALGIFYMLNSLNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIMKWPTKKTGRQTYGEEIANAISHGLMVFFGIFILVFFIIQTNKKSPSDVPIVLIFSIS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
VILLYLASTLNHSLSFTKAHKFFQKSDHISIYVLIWGTFAPILLLLKGLQGPSLVSEIIP
HHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHH
YLTKGRLIFVCQCLLVLLGIVGKIFWFEKWEHLHLTLFLLFGWSGLLFVKELFQPGNELF
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHH
FLFIFLGGCFYSVGVYFFVKDYKKYFHFIWHLFVILGTTFHALGIFYMLNSLNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]