| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757859
Identifier: 170757859
GI number: 170757859
Start: 3030356
End: 3031465
Strand: Reverse
Name: 170757859
Synonym: CLD_1737
Alternate gene names: NA
Gene position: 3031465-3030356 (Counterclockwise)
Preceding gene: 170756331
Following gene: 170756830
Centisome position: 76.59
GC content: 30.9
Gene sequence:
>1110_bases ATGAATAAACGAATTAAAACATTATTATCTGCAACTTTATTTACTATTTCATTTCTTACATATGGTGCATTTTCACAAGA TGTATTTGCTGCAACTATTCCATATGTCGCATCACAAAAAGTCTTTAGTGATGCAAATGTTACATCACGTCATATAGAAG CTACTAGTGATGGAGGATCAATTATAACTGGTTCTGGAACTATTGATGGAGTTACTGGCATATACGTAGCAAAATTAGAT CGTACTGAAAATAAAACTTGGCAAAAAATAATACCTAATTTAGGGGTTGGAATGTCAATTCAACCAACAAGTGATAACTG TTATATAGTCATTTCTAGTAATAAACATGTAATTAAATTAGATTCTAATGGAAATGTATTATGGGATAAAATTCTTTCTG ATGCAGCTGAGTTATCTTCTCTTGAACCAACTAATGATAATAATTTTATAATTTGTGGTTCTTCAAAATCAGACACTAGT AAATACGATACCTATCTATGCAAAATTGATGTAGATGGCAATGTTATTTTCTCAAATAGCTACGGAACTTCAGATAATGA CTTTGGTACATCTGTTCAACAAACAGTTGATGGTGGATATATAATTCTTGGATCTACTATGCCTTCTCCTGCGTATTATA TGTATTTAGTTAAAGTTGATAGAAATGGTAACTTACTATGGAGTAAGCCTGTTGGCGCAAAAGGAGGAACTGGTAGAGAT ATAAAAGTTGCTAAAGATGGTAGCTTTATAATTGCTGGGCAGATTGATTCTAAAGGAGCATTACTTAAAACAAATTCATC TGGTAATCTATTATGGTCAAAGACATTAAATGATTATGATATTACTTGTGTTGAACTAGATACTGATGGATATATGCTTG CTGGCAGCATTAGAGGAAGTGCTTTTTCATTAGATCTAGATATGCAAATTATAAAGACTGATTTATCTGGAAATAAAGTA TGGGATTATGAAACTACAGAATATAATGCTAGAGATTATTCTAGATCTATTACGAAAGATTTAGATGGTAGCTTCTTAAT TATAGGTGATACTACTAATAATCAAGGCTTTGGTGATGGGAATATTACCTTTATGAAAGTTAAATACTAA
Upstream 100 bases:
>100_bases TTTATAGTCATTTTATGCTTGTACTATTAAATATTGTGTAATATAATAGTTTTAAAAGAAATATTTGATTATTTTTACAA AATAAGGAGGTATAGTTCTC
Downstream 100 bases:
>100_bases TATTCTAATATAAAATTTTACGAGTTATTTGTAGCAGCTGTTATTATAATTTAATAATAACAAAGCCTAAATTCTTATGC TAAGGAATATATTTTCAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Kinase Domain Protein; Flagellin Domain Protein; Serine/Threonine Protein Kinase S-Layer Protein; Fibronectin Type III Domain-Containing Protein; PEGA Domain Family Protein; Cna B Domain-Containing Protein; PKD Domain Containing Protein; RIO1 Family Protein
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MNKRIKTLLSATLFTISFLTYGAFSQDVFAATIPYVASQKVFSDANVTSRHIEATSDGGSIITGSGTIDGVTGIYVAKLD RTENKTWQKIIPNLGVGMSIQPTSDNCYIVISSNKHVIKLDSNGNVLWDKILSDAAELSSLEPTNDNNFIICGSSKSDTS KYDTYLCKIDVDGNVIFSNSYGTSDNDFGTSVQQTVDGGYIILGSTMPSPAYYMYLVKVDRNGNLLWSKPVGAKGGTGRD IKVAKDGSFIIAGQIDSKGALLKTNSSGNLLWSKTLNDYDITCVELDTDGYMLAGSIRGSAFSLDLDMQIIKTDLSGNKV WDYETTEYNARDYSRSITKDLDGSFLIIGDTTNNQGFGDGNITFMKVKY
Sequences:
>Translated_369_residues MNKRIKTLLSATLFTISFLTYGAFSQDVFAATIPYVASQKVFSDANVTSRHIEATSDGGSIITGSGTIDGVTGIYVAKLD RTENKTWQKIIPNLGVGMSIQPTSDNCYIVISSNKHVIKLDSNGNVLWDKILSDAAELSSLEPTNDNNFIICGSSKSDTS KYDTYLCKIDVDGNVIFSNSYGTSDNDFGTSVQQTVDGGYIILGSTMPSPAYYMYLVKVDRNGNLLWSKPVGAKGGTGRD IKVAKDGSFIIAGQIDSKGALLKTNSSGNLLWSKTLNDYDITCVELDTDGYMLAGSIRGSAFSLDLDMQIIKTDLSGNKV WDYETTEYNARDYSRSITKDLDGSFLIIGDTTNNQGFGDGNITFMKVKY >Mature_369_residues MNKRIKTLLSATLFTISFLTYGAFSQDVFAATIPYVASQKVFSDANVTSRHIEATSDGGSIITGSGTIDGVTGIYVAKLD RTENKTWQKIIPNLGVGMSIQPTSDNCYIVISSNKHVIKLDSNGNVLWDKILSDAAELSSLEPTNDNNFIICGSSKSDTS KYDTYLCKIDVDGNVIFSNSYGTSDNDFGTSVQQTVDGGYIILGSTMPSPAYYMYLVKVDRNGNLLWSKPVGAKGGTGRD IKVAKDGSFIIAGQIDSKGALLKTNSSGNLLWSKTLNDYDITCVELDTDGYMLAGSIRGSAFSLDLDMQIIKTDLSGNKV WDYETTEYNARDYSRSITKDLDGSFLIIGDTTNNQGFGDGNITFMKVKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40063; Mature: 40063
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKRIKTLLSATLFTISFLTYGAFSQDVFAATIPYVASQKVFSDANVTSRHIEATSDGGS CCHHHHHHHHHHHHHHHHHHHCCCCCCHHEECCCCHHCCCEECCCCCCEEEEEEECCCCE IITGSGTIDGVTGIYVAKLDRTENKTWQKIIPNLGVGMSIQPTSDNCYIVISSNKHVIKL EEECCCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCCCEEEECCCCEEEEEECCCEEEEE DSNGNVLWDKILSDAAELSSLEPTNDNNFIICGSSKSDTSKYDTYLCKIDVDGNVIFSNS CCCCCEEHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCEEEECC YGTSDNDFGTSVQQTVDGGYIILGSTMPSPAYYMYLVKVDRNGNLLWSKPVGAKGGTGRD CCCCCCCCCCHHHHHCCCCEEEECCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCE IKVAKDGSFIIAGQIDSKGALLKTNSSGNLLWSKTLNDYDITCVELDTDGYMLAGSIRGS EEEECCCCEEEEEEECCCCCEEEECCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCC AFSLDLDMQIIKTDLSGNKVWDYETTEYNARDYSRSITKDLDGSFLIIGDTTNNQGFGDG EEEEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCC NITFMKVKY CEEEEEEEC >Mature Secondary Structure MNKRIKTLLSATLFTISFLTYGAFSQDVFAATIPYVASQKVFSDANVTSRHIEATSDGGS CCHHHHHHHHHHHHHHHHHHHCCCCCCHHEECCCCHHCCCEECCCCCCEEEEEEECCCCE IITGSGTIDGVTGIYVAKLDRTENKTWQKIIPNLGVGMSIQPTSDNCYIVISSNKHVIKL EEECCCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCCCEEEECCCCEEEEEECCCEEEEE DSNGNVLWDKILSDAAELSSLEPTNDNNFIICGSSKSDTSKYDTYLCKIDVDGNVIFSNS CCCCCEEHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCEEEECC YGTSDNDFGTSVQQTVDGGYIILGSTMPSPAYYMYLVKVDRNGNLLWSKPVGAKGGTGRD CCCCCCCCCCHHHHHCCCCEEEECCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCE IKVAKDGSFIIAGQIDSKGALLKTNSSGNLLWSKTLNDYDITCVELDTDGYMLAGSIRGS EEEECCCCEEEEEEECCCCCEEEECCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCC AFSLDLDMQIIKTDLSGNKVWDYETTEYNARDYSRSITKDLDGSFLIIGDTTNNQGFGDG EEEEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCC NITFMKVKY CEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA