| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is ptbA
Identifier: 170756331
GI number: 170756331
Start: 3033823
End: 3034302
Strand: Reverse
Name: ptbA
Synonym: CLD_1734
Alternate gene names: 170756331
Gene position: 3034302-3033823 (Counterclockwise)
Preceding gene: 170756295
Following gene: 170757859
Centisome position: 76.66
GC content: 31.46
Gene sequence:
>480_bases ATGTTTGGCTTTTTTAATAGAGAACACAAGATTCTTGCTCCAGTTGCAGGGAGAGTATTAGAATTATCTGAAGTGCCAGA TGAAGTATTTGCAAGTAAATTAGCAGGAGATGGTGTTGCTATTGATTGTGAAGATGATATTATTGTGGCTCCAGCAGATG GAGTAATTTCTTTAATATTTAAAACTAATCATGCTTTTGGAATTATATTAAAAGATGGAACAGAGCTTTTAGTTCATATT GGTATTGACACTGTTAAATTAGAAGGCAAAGGATTTGAAAGATTATTACAGGAAGGCGATAAGGTTAAAGCAGGAGATCC TATTATTAAGATAGATAGGGAGTTTATTAAGTCTCAAGGATATTCTTTGATTACGCCTGTGTTAATAACAAATCCTGATA ATGTTAAAAATACAGAATATAAAACAGGTTTTAATGCTAAGCCAGGAAAGGATATTTTGATTAGCTATACTGATAAATAA
Upstream 100 bases:
>100_bases AATCAGGCATGAGTTAGGGATAACTTATGCCTTTTTTTTATTTGAATTTTTATAAAATGTAGGCAATATCTGTATTACCT ATATTTAGGAGGTTTTAAAA
Downstream 100 bases:
>100_bases TTCATAAACTTATTTATAATGTTAAATATAAAGTTTATTTATTAAGGCGTAATACTAATATAATTTATGGATATTGGTAT TACGCCTTTTGGTATAAAAA
Product: PTS system, glucose subfamily, IIA component
Products: protein histidine; sugar phosphate
Alternate protein names: EIIA-Glc; EIII-Glc; PTS system glucose-specific EIIA component [H]
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MFGFFNREHKILAPVAGRVLELSEVPDEVFASKLAGDGVAIDCEDDIIVAPADGVISLIFKTNHAFGIILKDGTELLVHI GIDTVKLEGKGFERLLQEGDKVKAGDPIIKIDREFIKSQGYSLITPVLITNPDNVKNTEYKTGFNAKPGKDILISYTDK
Sequences:
>Translated_159_residues MFGFFNREHKILAPVAGRVLELSEVPDEVFASKLAGDGVAIDCEDDIIVAPADGVISLIFKTNHAFGIILKDGTELLVHI GIDTVKLEGKGFERLLQEGDKVKAGDPIIKIDREFIKSQGYSLITPVLITNPDNVKNTEYKTGFNAKPGKDILISYTDK >Mature_159_residues MFGFFNREHKILAPVAGRVLELSEVPDEVFASKLAGDGVAIDCEDDIIVAPADGVISLIFKTNHAFGIILKDGTELLVHI GIDTVKLEGKGFERLLQEGDKVKAGDPIIKIDREFIKSQGYSLITPVLITNPDNVKNTEYKTGFNAKPGKDILISYTDK
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG2190
COG function: function code G; Phosphotransferase system IIA components
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIA type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786894, Length=125, Percent_Identity=49.6, Blast_Score=136, Evalue=6e-34, Organism=Escherichia coli, GI1788757, Length=128, Percent_Identity=47.65625, Blast_Score=127, Evalue=3e-31, Organism=Escherichia coli, GI1790159, Length=124, Percent_Identity=45.1612903225806, Blast_Score=105, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR001127 [H]
Pfam domain/function: PF00358 PTS_EIIA_1 [H]
EC number: 2.7.1.69
Molecular weight: Translated: 17386; Mature: 17386
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00371 PTS_EIIA_TYPE_1_HIS ; PS51093 PTS_EIIA_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGFFNREHKILAPVAGRVLELSEVPDEVFASKLAGDGVAIDCEDDIIVAPADGVISLIF CCCCCCCCCEEEECCCCCEEEHHCCCHHHHHHHHCCCCEEEECCCCEEEECCCCEEEEEE KTNHAFGIILKDGTELLVHIGIDTVKLEGKGFERLLQEGDKVKAGDPIIKIDREFIKSQG ECCCEEEEEEECCCEEEEEECCEEEEECCCCHHHHHHCCCCCCCCCCEEEECHHHHHCCC YSLITPVLITNPDNVKNTEYKTGFNAKPGKDILISYTDK CEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure MFGFFNREHKILAPVAGRVLELSEVPDEVFASKLAGDGVAIDCEDDIIVAPADGVISLIF CCCCCCCCCEEEECCCCCEEEHHCCCHHHHHHHHCCCCEEEECCCCEEEECCCCEEEEEE KTNHAFGIILKDGTELLVHIGIDTVKLEGKGFERLLQEGDKVKAGDPIIKIDREFIKSQG ECCCEEEEEEECCCEEEEEECCEEEEECCCCHHHHHHCCCCCCCCCCEEEECHHHHHCCC YSLITPVLITNPDNVKNTEYKTGFNAKPGKDILISYTDK CEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12721629 [H]