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The map label for this gene is amiA [C]

Identifier: 170757824

GI number: 170757824

Start: 1587398

End: 1588249

Strand: Direct

Name: amiA [C]

Synonym: CLD_3119

Alternate gene names: 170757824

Gene position: 1587398-1588249 (Clockwise)

Preceding gene: 170756081

Following gene: 170754896

Centisome position: 40.1

GC content: 30.05

Gene sequence:

>852_bases
GTGAAGAAAAAGATAGTTTTAGTTATGTGTGTTATTACTTTGTTATTATTTAGTGCATGTACTAGTAAGGAAAATTTTAA
TAAAAAAGTTAGAGAAGAGAAGAAGGTAGTTAATAAAGAAGAAAAATCACAAAAGAAAAAAGAAAATGCATTTGGGGAGA
ATAATGAAGAAAAAGAGCATAATGATATATTAAAAGAAAAAAAGGAAGATAAATCTAAAGAAAATTTAAAAAATAAAATA
ATAGTAATAGATCCTGGTCATGGAAGCAAATCTAATTTAGAGTTAGAAAGAGTTTCTCCAGATAGTGAGGAAAAGAAGAT
TAAAGATGGTGGAGGAGCTGATGGAGTAAACAGCAAAACTCCAGAGTATTTAATAGCTATGGATGTAGCCTCAAAACTTA
AAGAAACTCTACAAAAGGAAGGTTATACTGTTATTATGACTAAAAATAAACATTCCGAGAGTTTAGGAAACATAGAAAGA
GCAGAAGTAGGAAATAAAAATAATGCTAATTTAGTTATAAGAATACATGCAGATTCAGCAGACTTAGAGGATGCTAAGGG
AGCTTCTATGCTTGTACCATCTAAAAAAGGATATGCTTCAGAAATTAATCAATTAAGCAAAAAATATGGAGACATACTTC
TTAGGGAAATGGTAGCATCAGCTAATATGAACAATAGGGGTGTAATAGAGAGGGAGGATATGACAGGATTTAACTGGTCA
AAGGTTCCAGTAGTTTTAGTTGAGATGGGCTTTCTGTCAAATGCAGAAGAGGATAAGCTTTTAAATACTGAAGAATATAA
AATAAAAATAGTACAAGGTTTAACTGAAGGTATTAAAAAAGCGATAAACTAA

Upstream 100 bases:

>100_bases
GTAGCACTTCATTGCAAAGCTGCCTTTGATATTTTAAATTCATAATATAAGGGTAGTAATATAATTTAGATTAAATTTTA
AAATAGGTTGTGAATATGAA

Downstream 100 bases:

>100_bases
TTGTTATATAAAATGAAAGCTTTAATTTAATGTTATATGTTTAATATATTCCACTAAGGTAAATTTTTCATGTTTACTTT
AGTGGAATATCTTATTTAAA

Product: N-acetylmuramoyl-L-alanine amidase

Products: NA

Alternate protein names: N-Acetylmuramoyl-L-Alanine Amidase; N-Acetymuramyl-L-Alanine Amidase; N-Acetylmuramoyl-L-Alanine Amidase CwlD; Germination-Specific N-Acetylmuramoyl-L-Alanine Amidase; Hydrolase; N-Acetylmuramoyl-L-Alanine Amidase-Like Protein; Surface Protein PspC; N-Acetymuramyl-L-Alanine Amidase-Related Protein; Cell Wall Glycoprotein Hydrolase; N-Acetylmuramoyl-L-Alanine Amidase Containing SLH Domains

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKKKIVLVMCVITLLLFSACTSKENFNKKVREEKKVVNKEEKSQKKKENAFGENNEEKEHNDILKEKKEDKSKENLKNKI
IVIDPGHGSKSNLELERVSPDSEEKKIKDGGGADGVNSKTPEYLIAMDVASKLKETLQKEGYTVIMTKNKHSESLGNIER
AEVGNKNNANLVIRIHADSADLEDAKGASMLVPSKKGYASEINQLSKKYGDILLREMVASANMNNRGVIEREDMTGFNWS
KVPVVLVEMGFLSNAEEDKLLNTEEYKIKIVQGLTEGIKKAIN

Sequences:

>Translated_283_residues
MKKKIVLVMCVITLLLFSACTSKENFNKKVREEKKVVNKEEKSQKKKENAFGENNEEKEHNDILKEKKEDKSKENLKNKI
IVIDPGHGSKSNLELERVSPDSEEKKIKDGGGADGVNSKTPEYLIAMDVASKLKETLQKEGYTVIMTKNKHSESLGNIER
AEVGNKNNANLVIRIHADSADLEDAKGASMLVPSKKGYASEINQLSKKYGDILLREMVASANMNNRGVIEREDMTGFNWS
KVPVVLVEMGFLSNAEEDKLLNTEEYKIKIVQGLTEGIKKAIN
>Mature_283_residues
MKKKIVLVMCVITLLLFSACTSKENFNKKVREEKKVVNKEEKSQKKKENAFGENNEEKEHNDILKEKKEDKSKENLKNKI
IVIDPGHGSKSNLELERVSPDSEEKKIKDGGGADGVNSKTPEYLIAMDVASKLKETLQKEGYTVIMTKNKHSESLGNIER
AEVGNKNNANLVIRIHADSADLEDAKGASMLVPSKKGYASEINQLSKKYGDILLREMVASANMNNRGVIEREDMTGFNWS
KVPVVLVEMGFLSNAEEDKLLNTEEYKIKIVQGLTEGIKKAIN

Specific function: Unknown

COG id: COG0860

COG function: function code M; N-acetylmuramoyl-L-alanine amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.5.1.28

Molecular weight: Translated: 31684; Mature: 31684

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKIVLVMCVITLLLFSACTSKENFNKKVREEKKVVNKEEKSQKKKENAFGENNEEKEH
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHH
NDILKEKKEDKSKENLKNKIIVIDPGHGSKSNLELERVSPDSEEKKIKDGGGADGVNSKT
HHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEECCCCCHHHHHCCCCCCCCCCCCC
PEYLIAMDVASKLKETLQKEGYTVIMTKNKHSESLGNIERAEVGNKNNANLVIRIHADSA
CCCEEHHHHHHHHHHHHHHCCCEEEEECCCCCHHHCCCHHHHCCCCCCCEEEEEEECCCC
DLEDAKGASMLVPSKKGYASEINQLSKKYGDILLREMVASANMNNRGVIEREDMTGFNWS
CCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCC
KVPVVLVEMGFLSNAEEDKLLNTEEYKIKIVQGLTEGIKKAIN
CCCEEEEEHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKKIVLVMCVITLLLFSACTSKENFNKKVREEKKVVNKEEKSQKKKENAFGENNEEKEH
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHH
NDILKEKKEDKSKENLKNKIIVIDPGHGSKSNLELERVSPDSEEKKIKDGGGADGVNSKT
HHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEECCCCCHHHHHCCCCCCCCCCCCC
PEYLIAMDVASKLKETLQKEGYTVIMTKNKHSESLGNIERAEVGNKNNANLVIRIHADSA
CCCEEHHHHHHHHHHHHHHCCCEEEEECCCCCHHHCCCHHHHCCCCCCCEEEEEEECCCC
DLEDAKGASMLVPSKKGYASEINQLSKKYGDILLREMVASANMNNRGVIEREDMTGFNWS
CCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCC
KVPVVLVEMGFLSNAEEDKLLNTEEYKIKIVQGLTEGIKKAIN
CCCEEEEEHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carboxylic acid amide hydrolysis [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA