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The map label for this gene is ycfF [C]

Identifier: 170757807

GI number: 170757807

Start: 1452131

End: 1452559

Strand: Direct

Name: ycfF [C]

Synonym: CLD_3245

Alternate gene names: 170757807

Gene position: 1452131-1452559 (Clockwise)

Preceding gene: 170757158

Following gene: 170755648

Centisome position: 36.69

GC content: 27.74

Gene sequence:

>429_bases
ATGAAAAACACTATGGAAAACTGTAATTTTTGCAAGATAATAAACAAGGAAAAAAAGGCTAATATTGTATACCAAAATGA
TTTGGTTTGCTGTTTTTTAGCAGAAGAGCCTATTAATGAAGGACATATGCTAATAGCACCTAAAAAACACTATTTAGATT
TAGACCAAATGGATGATGAAACAGCTATAGAAATAATGAGAGTGTCTAAAATTATGGTAAAGATATTGAAAGATACATAT
AAATCAGATGGATATAGTATAATGCAAAATGGTGGAAGCTTTAATAATGTTGGTCATTATCATATGCATTTGTTCCCAAG
ATATAAAGGAGATAGTTTTAGTTGGAGTTATGGAGAAGAGGATAATAGCACTCTTGAAGTTGTAAGTAAAAAAATACAAC
AACAATTAAAAGATTATGTAATAAAATAA

Upstream 100 bases:

>100_bases
ATAGTATATTTAATAGTATGTTTTATTTTTTCAAAGTTAGTTACAATAAAAAAAGGTAAGTAGAATTTTATTTTAAATTT
TTATAAAAAAGGAGATAAGT

Downstream 100 bases:

>100_bases
TTTATATTTAAAGTAAAGTTATTTTAATATATTTTCTAGCTAGATTACTAAAAAATTAATTATAAGAAAATTTTATTTAA
TTGTGATGGTATATTTTAAA

Product: HIT family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MKNTMENCNFCKIINKEKKANIVYQNDLVCCFLAEEPINEGHMLIAPKKHYLDLDQMDDETAIEIMRVSKIMVKILKDTY
KSDGYSIMQNGGSFNNVGHYHMHLFPRYKGDSFSWSYGEEDNSTLEVVSKKIQQQLKDYVIK

Sequences:

>Translated_142_residues
MKNTMENCNFCKIINKEKKANIVYQNDLVCCFLAEEPINEGHMLIAPKKHYLDLDQMDDETAIEIMRVSKIMVKILKDTY
KSDGYSIMQNGGSFNNVGHYHMHLFPRYKGDSFSWSYGEEDNSTLEVVSKKIQQQLKDYVIK
>Mature_142_residues
MKNTMENCNFCKIINKEKKANIVYQNDLVCCFLAEEPINEGHMLIAPKKHYLDLDQMDDETAIEIMRVSKIMVKILKDTY
KSDGYSIMQNGGSFNNVGHYHMHLFPRYKGDSFSWSYGEEDNSTLEVVSKKIQQQLKDYVIK

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320078, Length=135, Percent_Identity=31.8518518518519, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 16555; Mature: 16555

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTMENCNFCKIINKEKKANIVYQNDLVCCFLAEEPINEGHMLIAPKKHYLDLDQMDDE
CCCCCCCCCEEEEECCCCCCCEEEECCEEEEEEECCCCCCCEEEEECHHHCCCCCCCCCH
TAIEIMRVSKIMVKILKDTYKSDGYSIMQNGGSFNNVGHYHMHLFPRYKGDSFSWSYGEE
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCC
DNSTLEVVSKKIQQQLKDYVIK
CCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNTMENCNFCKIINKEKKANIVYQNDLVCCFLAEEPINEGHMLIAPKKHYLDLDQMDDE
CCCCCCCCCEEEEECCCCCCCEEEECCEEEEEEECCCCCCCEEEEECHHHCCCCCCCCCH
TAIEIMRVSKIMVKILKDTYKSDGYSIMQNGGSFNNVGHYHMHLFPRYKGDSFSWSYGEE
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCC
DNSTLEVVSKKIQQQLKDYVIK
CCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]